RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
GTF3C2-209ENST00000470115 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
GTF3C2-209ENST00000470115 C4BP0C0L5 1744 aa22.11■■□□□ 1.13
GTF3C2-209ENST00000470115 SMIM5Q71RC9 77 aa22.11■■□□□ 1.13
GTF3C2-209ENST00000470115 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
GTF3C2-209ENST00000470115 RBM42Q9BTD8 480 aaKnown RBP22.11■■□□□ 1.13
GTF3C2-209ENST00000470115 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
GTF3C2-209ENST00000470115 NFATC2IPQ8NCF5 419 aa22.1■■□□□ 1.13
GTF3C2-209ENST00000470115 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
GTF3C2-209ENST00000470115 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
GTF3C2-209ENST00000470115 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
GTF3C2-209ENST00000470115 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
GTF3C2-209ENST00000470115 PHF14O94880 888 aa22.08■■□□□ 1.13
GTF3C2-209ENST00000470115 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
GTF3C2-209ENST00000470115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
GTF3C2-209ENST00000470115 MTHFSDQ2M296 383 aaKnown RBP22.07■■□□□ 1.12
GTF3C2-209ENST00000470115 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
GTF3C2-209ENST00000470115 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
GTF3C2-209ENST00000470115 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
GTF3C2-209ENST00000470115 GNPATO15228 680 aa22.05■■□□□ 1.12
GTF3C2-209ENST00000470115 PTCD1O75127 700 aaKnown RBP22.05■■□□□ 1.12
GTF3C2-209ENST00000470115 SSFA2P28290 1259 aa22.05■■□□□ 1.12
GTF3C2-209ENST00000470115 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
GTF3C2-209ENST00000470115 UBR3Q6ZT12 1888 aa22.05■■□□□ 1.12
GTF3C2-209ENST00000470115 RNMTO43148 476 aaKnown RBP22.04■■□□□ 1.12
GTF3C2-209ENST00000470115 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
GTF3C2-209ENST00000470115 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
GTF3C2-209ENST00000470115 SLC52A2Q9HAB3 445 aa22.02■■□□□ 1.12
GTF3C2-209ENST00000470115 RC3H1Q5TC82 1133 aaKnown RBP22.01■■□□□ 1.11
GTF3C2-209ENST00000470115 ZNF831Q5JPB2 1677 aa21.99■■□□□ 1.11
GTF3C2-209ENST00000470115 YY1P25490 414 aa21.99■■□□□ 1.11
GTF3C2-209ENST00000470115 NLGN2Q8NFZ4 835 aa21.99■■□□□ 1.11
GTF3C2-209ENST00000470115 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
GTF3C2-209ENST00000470115 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
GTF3C2-209ENST00000470115 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
GTF3C2-209ENST00000470115 TRAPPC3LQ5T215 181 aa21.97■■□□□ 1.11
GTF3C2-209ENST00000470115 CNTNAP4Q9C0A0 1308 aa21.97■■□□□ 1.11
GTF3C2-209ENST00000470115 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 PHACTR3Q96KR7 559 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 UTRNP46939 3433 aa21.96■■□□□ 1.11
GTF3C2-209ENST00000470115 COL5A3P25940 1745 aaPredicted RBP21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 GNAT3A8MTJ3 354 aa21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 CRKLP46109 303 aaKnown RBP21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 GPR162Q16538 588 aa21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 ARHGEF1Q92888 912 aaKnown RBP21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 MRC1P22897 1456 aa21.95■■□□□ 1.1
GTF3C2-209ENST00000470115 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
GTF3C2-209ENST00000470115 IL17REQ8NFR9 667 aa21.94■■□□□ 1.1
GTF3C2-209ENST00000470115 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
GTF3C2-209ENST00000470115 ADAMTS7Q9UKP4 1686 aa21.93■■□□□ 1.1
GTF3C2-209ENST00000470115 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
GTF3C2-209ENST00000470115 ADRA2BP18089 450 aa21.92■■□□□ 1.1
GTF3C2-209ENST00000470115 DNAJC10Q8IXB1 793 aa21.92■■□□□ 1.1
GTF3C2-209ENST00000470115 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
GTF3C2-209ENST00000470115 RFC4P35249 363 aa21.91■■□□□ 1.1
GTF3C2-209ENST00000470115 TEFQ10587 303 aa21.91■■□□□ 1.1
GTF3C2-209ENST00000470115 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
GTF3C2-209ENST00000470115 TJP1Q07157 1748 aa21.9■■□□□ 1.1
GTF3C2-209ENST00000470115 FCHSD2O94868 740 aa21.9■■□□□ 1.1
GTF3C2-209ENST00000470115 INTS5Q6P9B9 1019 aaKnown RBP21.9■■□□□ 1.1
GTF3C2-209ENST00000470115 MMP10P09238 476 aa21.89■■□□□ 1.09
GTF3C2-209ENST00000470115 NLGN1Q8N2Q7 840 aa21.89■■□□□ 1.09
GTF3C2-209ENST00000470115 GYS1P13807 737 aa21.88■■□□□ 1.09
GTF3C2-209ENST00000470115 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
GTF3C2-209ENST00000470115 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
GTF3C2-209ENST00000470115 KCPQ6ZWJ8 1503 aa21.88■■□□□ 1.09
GTF3C2-209ENST00000470115 CYP19A1P11511 503 aaPredicted RBP21.87■■□□□ 1.09
GTF3C2-209ENST00000470115 TTC5Q8N0Z6 440 aa21.87■■□□□ 1.09
GTF3C2-209ENST00000470115 CICQ96RK0 1608 aaPredicted RBP21.87■■□□□ 1.09
GTF3C2-209ENST00000470115 YBX3P16989 372 aaKnown RBP eCLIP21.86■■□□□ 1.09
GTF3C2-209ENST00000470115 SRP68Q9UHB9 627 aaKnown RBP21.86■■□□□ 1.09
GTF3C2-209ENST00000470115 VSIG10Q8N0Z9 540 aa21.85■■□□□ 1.09
GTF3C2-209ENST00000470115 CEMIPQ8WUJ3 1361 aa21.85■■□□□ 1.09
GTF3C2-209ENST00000470115 ZNF790Q6PG37 636 aa21.84■■□□□ 1.09
GTF3C2-209ENST00000470115 ZNF496Q96IT1 587 aaPredicted RBP21.83■■□□□ 1.09
GTF3C2-209ENST00000470115 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
GTF3C2-209ENST00000470115 MCM10Q7L590 875 aa21.82■■□□□ 1.08
GTF3C2-209ENST00000470115 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
GTF3C2-209ENST00000470115 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
GTF3C2-209ENST00000470115 SOS1Q07889 1333 aaPredicted RBP21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 FKBP8Q14318 412 aa21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 RALBP1Q15311 655 aa21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 ZBTB1Q9Y2K1 713 aa21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 SIPA1L3O60292 1781 aaPredicted RBP21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
GTF3C2-209ENST00000470115 BTBD11A6QL63 1104 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 KCNQ3O43525 872 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 WWC3Q9ULE0 1092 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 PARP3Q9Y6F1 533 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 CHD4Q14839 1912 aa21.8■■□□□ 1.08
GTF3C2-209ENST00000470115 HEG1Q9ULI3 1381 aa21.79■■□□□ 1.08
GTF3C2-209ENST00000470115 ZPR1O75312 459 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms