RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 HSPA6P17066 643 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
NUP98-209ENST00000469881 PIGBQ92521 554 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 EMILIN1Q9Y6C2 1016 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 WDR90Q96KV7 1748 aa13.27□□□□□ -0.29
NUP98-209ENST00000469881 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
NUP98-209ENST00000469881 KDRP35968 1356 aa13.26□□□□□ -0.29
NUP98-209ENST00000469881 SIK1P57059 783 aa13.26□□□□□ -0.29
NUP98-209ENST00000469881 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
NUP98-209ENST00000469881 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
NUP98-209ENST00000469881 TMOD3Q9NYL9 352 aa13.25□□□□□ -0.29
NUP98-209ENST00000469881 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
NUP98-209ENST00000469881 GNPATO15228 680 aa13.24□□□□□ -0.29
NUP98-209ENST00000469881 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
NUP98-209ENST00000469881 SMIM5Q71RC9 77 aa13.24□□□□□ -0.29
NUP98-209ENST00000469881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
NUP98-209ENST00000469881 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
NUP98-209ENST00000469881 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
NUP98-209ENST00000469881 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
NUP98-209ENST00000469881 TJP1Q07157 1748 aa13.23□□□□□ -0.29
NUP98-209ENST00000469881 ITPK1Q13572 414 aa13.23□□□□□ -0.29
NUP98-209ENST00000469881 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
NUP98-209ENST00000469881 KIF3CO14782 793 aa13.22□□□□□ -0.29
NUP98-209ENST00000469881 CARD14Q9BXL6 1004 aa13.22□□□□□ -0.29
NUP98-209ENST00000469881 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
NUP98-209ENST00000469881 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
NUP98-209ENST00000469881 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
NUP98-209ENST00000469881 MMP10P09238 476 aa13.21□□□□□ -0.29
NUP98-209ENST00000469881 PHKG2P15735 406 aa13.21□□□□□ -0.29
NUP98-209ENST00000469881 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
NUP98-209ENST00000469881 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
NUP98-209ENST00000469881 EYA1Q99502 592 aa13.21□□□□□ -0.29
NUP98-209ENST00000469881 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
NUP98-209ENST00000469881 ADAMTS7Q9UKP4 1686 aa13.2□□□□□ -0.3
NUP98-209ENST00000469881 SBF1O95248 1867 aa13.2□□□□□ -0.3
NUP98-209ENST00000469881 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
NUP98-209ENST00000469881 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
NUP98-209ENST00000469881 TGFB2P61812 414 aa13.18□□□□□ -0.3
NUP98-209ENST00000469881 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
NUP98-209ENST00000469881 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
NUP98-209ENST00000469881 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
NUP98-209ENST00000469881 APLP1P51693 650 aa13.17□□□□□ -0.3
NUP98-209ENST00000469881 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
NUP98-209ENST00000469881 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
NUP98-209ENST00000469881 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
NUP98-209ENST00000469881 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
NUP98-209ENST00000469881 TOMM70O94826 608 aa13.16□□□□□ -0.3
NUP98-209ENST00000469881 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
NUP98-209ENST00000469881 TRAPPC3LQ5T215 181 aa13.16□□□□□ -0.3
NUP98-209ENST00000469881 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
NUP98-209ENST00000469881 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
NUP98-209ENST00000469881 ERVV-2B6SEH9 535 aa13.15□□□□□ -0.3
NUP98-209ENST00000469881 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
NUP98-209ENST00000469881 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
NUP98-209ENST00000469881 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
NUP98-209ENST00000469881 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
NUP98-209ENST00000469881 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
NUP98-209ENST00000469881 GYS1P13807 737 aa13.14□□□□□ -0.31
NUP98-209ENST00000469881 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
NUP98-209ENST00000469881 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
NUP98-209ENST00000469881 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
NUP98-209ENST00000469881 RFC4P35249 363 aa13.13□□□□□ -0.31
NUP98-209ENST00000469881 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
NUP98-209ENST00000469881 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
NUP98-209ENST00000469881 FCHSD2O94868 740 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 DPEP1P16444 411 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 KCPQ6ZWJ8 1503 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
NUP98-209ENST00000469881 MRC1P22897 1456 aa13.1□□□□□ -0.31
NUP98-209ENST00000469881 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
NUP98-209ENST00000469881 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
NUP98-209ENST00000469881 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
NUP98-209ENST00000469881 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
NUP98-209ENST00000469881 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
NUP98-209ENST00000469881 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
NUP98-209ENST00000469881 USP42Q9H9J4 1324 aaKnown RBP13.1□□□□□ -0.31
NUP98-209ENST00000469881 KCNA3P22001 575 aa13.09□□□□□ -0.31
NUP98-209ENST00000469881 CABP4P57796 275 aa13.09□□□□□ -0.31
NUP98-209ENST00000469881 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
NUP98-209ENST00000469881 SCN7AQ01118 1682 aa13.08□□□□□ -0.31
NUP98-209ENST00000469881 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
NUP98-209ENST00000469881 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
NUP98-209ENST00000469881 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
NUP98-209ENST00000469881 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
NUP98-209ENST00000469881 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
NUP98-209ENST00000469881 DDR1Q08345 913 aa13.07□□□□□ -0.32
NUP98-209ENST00000469881 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
NUP98-209ENST00000469881 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
NUP98-209ENST00000469881 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
NUP98-209ENST00000469881 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
NUP98-209ENST00000469881 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
NUP98-209ENST00000469881 MTHFSP49914 203 aa13.06□□□□□ -0.32
NUP98-209ENST00000469881 FSTL1Q12841 308 aa13.06□□□□□ -0.32
NUP98-209ENST00000469881 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms