RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
THBS3-206ENST00000469769 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
THBS3-206ENST00000469769 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
THBS3-206ENST00000469769 MBIPQ9NS73 344 aa13.52□□□□□ -0.25
THBS3-206ENST00000469769 ITGB4P16144 1822 aa13.51□□□□□ -0.25
THBS3-206ENST00000469769 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
THBS3-206ENST00000469769 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
THBS3-206ENST00000469769 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
THBS3-206ENST00000469769 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
THBS3-206ENST00000469769 TEFQ10587 303 aa13.5□□□□□ -0.25
THBS3-206ENST00000469769 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
THBS3-206ENST00000469769 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
THBS3-206ENST00000469769 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
THBS3-206ENST00000469769 TSR2Q969E8 191 aaKnown RBP13.49□□□□□ -0.25
THBS3-206ENST00000469769 PAPPAQ13219 1627 aa13.49□□□□□ -0.25
THBS3-206ENST00000469769 RXRBP28702 533 aa13.48□□□□□ -0.25
THBS3-206ENST00000469769 CABP4P57796 275 aa13.48□□□□□ -0.25
THBS3-206ENST00000469769 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
THBS3-206ENST00000469769 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
THBS3-206ENST00000469769 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
THBS3-206ENST00000469769 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
THBS3-206ENST00000469769 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
THBS3-206ENST00000469769 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
THBS3-206ENST00000469769 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
THBS3-206ENST00000469769 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
THBS3-206ENST00000469769 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
THBS3-206ENST00000469769 VAMP4O75379 141 aa13.46□□□□□ -0.25
THBS3-206ENST00000469769 ZNF790Q6PG37 636 aa13.46□□□□□ -0.25
THBS3-206ENST00000469769 PIGBQ92521 554 aa13.46□□□□□ -0.25
THBS3-206ENST00000469769 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
THBS3-206ENST00000469769 LAS1LQ9Y4W2 734 aaKnown RBP13.46□□□□□ -0.25
THBS3-206ENST00000469769 RNF123Q5XPI4 1314 aa13.45□□□□□ -0.26
THBS3-206ENST00000469769 KCNQ3O43525 872 aa13.45□□□□□ -0.26
THBS3-206ENST00000469769 HOXB7P09629 217 aa13.45□□□□□ -0.26
THBS3-206ENST00000469769 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
THBS3-206ENST00000469769 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
THBS3-206ENST00000469769 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
THBS3-206ENST00000469769 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 RGS12O14924 1447 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
THBS3-206ENST00000469769 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
THBS3-206ENST00000469769 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
THBS3-206ENST00000469769 A0A0G2JS52 829 aa13.42□□□□□ -0.26
THBS3-206ENST00000469769 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
THBS3-206ENST00000469769 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
THBS3-206ENST00000469769 MYT1Q01538 1121 aa13.42□□□□□ -0.26
THBS3-206ENST00000469769 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
THBS3-206ENST00000469769 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
THBS3-206ENST00000469769 TWISTNBQ3B726 338 aaPredicted RBP13.42□□□□□ -0.26
THBS3-206ENST00000469769 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
THBS3-206ENST00000469769 ZNF831Q5JPB2 1677 aa13.41□□□□□ -0.26
THBS3-206ENST00000469769 ALDH1L2Q3SY69 923 aa13.41□□□□□ -0.26
THBS3-206ENST00000469769 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
THBS3-206ENST00000469769 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
THBS3-206ENST00000469769 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
THBS3-206ENST00000469769 KCNQ2O43526 872 aa13.4□□□□□ -0.26
THBS3-206ENST00000469769 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.26
THBS3-206ENST00000469769 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
THBS3-206ENST00000469769 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
THBS3-206ENST00000469769 BTAF1O14981 1849 aa13.39□□□□□ -0.27
THBS3-206ENST00000469769 TTC5Q8N0Z6 440 aa13.39□□□□□ -0.27
THBS3-206ENST00000469769 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
THBS3-206ENST00000469769 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
THBS3-206ENST00000469769 EP400Q96L91 3159 aa13.38□□□□□ -0.27
THBS3-206ENST00000469769 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
THBS3-206ENST00000469769 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
THBS3-206ENST00000469769 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
THBS3-206ENST00000469769 C5P01031 1676 aa13.37□□□□□ -0.27
THBS3-206ENST00000469769 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
THBS3-206ENST00000469769 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
THBS3-206ENST00000469769 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
THBS3-206ENST00000469769 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
THBS3-206ENST00000469769 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
THBS3-206ENST00000469769 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
THBS3-206ENST00000469769 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
THBS3-206ENST00000469769 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
THBS3-206ENST00000469769 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
THBS3-206ENST00000469769 LY75O60449 1722 aa13.36□□□□□ -0.27
THBS3-206ENST00000469769 BCAR3O75815 825 aa13.35□□□□□ -0.27
THBS3-206ENST00000469769 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
THBS3-206ENST00000469769 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
THBS3-206ENST00000469769 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 TJP1Q07157 1748 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 LRP10Q7Z4F1 713 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
THBS3-206ENST00000469769 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
THBS3-206ENST00000469769 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
THBS3-206ENST00000469769 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
THBS3-206ENST00000469769 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
THBS3-206ENST00000469769 SIK1P57059 783 aa13.33□□□□□ -0.28
THBS3-206ENST00000469769 PDIA6Q15084 440 aa13.33□□□□□ -0.28
THBS3-206ENST00000469769 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.28
THBS3-206ENST00000469769 RREB1Q92766 1687 aa13.32□□□□□ -0.28
THBS3-206ENST00000469769 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms