RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ERVV-2B6SEH9 535 aa23.56■■□□□ 1.36
MRPL28-208ENST00000469744 SMIM5Q71RC9 77 aa23.56■■□□□ 1.36
MRPL28-208ENST00000469744 FHDC1Q9C0D6 1143 aaPredicted RBP23.56■■□□□ 1.36
MRPL28-208ENST00000469744 UBR3Q6ZT12 1888 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 CABP4P57796 275 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 LINC00116Q8NCU8 138 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 SLC16A10Q8TF71 515 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 ARXQ96QS3 562 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 SCN11AQ9UI33 1791 aa23.55■■□□□ 1.36
MRPL28-208ENST00000469744 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
MRPL28-208ENST00000469744 U2SURPO15042 1029 aaKnown RBP23.54■■□□□ 1.36
MRPL28-208ENST00000469744 ITPK1Q13572 414 aa23.54■■□□□ 1.36
MRPL28-208ENST00000469744 VIRMAQ69YN4 1812 aaKnown RBP23.53■■□□□ 1.36
MRPL28-208ENST00000469744 AK7Q96M32 723 aa23.53■■□□□ 1.36
MRPL28-208ENST00000469744 ATP6V1AP38606 617 aa23.52■■□□□ 1.36
MRPL28-208ENST00000469744 MSL1Q68DK7 614 aa23.52■■□□□ 1.36
MRPL28-208ENST00000469744 PHF14O94880 888 aa23.51■■□□□ 1.35
MRPL28-208ENST00000469744 SYT17Q9BSW7 474 aa23.5■■□□□ 1.35
MRPL28-208ENST00000469744 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
MRPL28-208ENST00000469744 PRKRIP1Q9H875 184 aaPredicted RBP23.5■■□□□ 1.35
MRPL28-208ENST00000469744 POLD1P28340 1107 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 AKAP4Q5JQC9 854 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
MRPL28-208ENST00000469744 MTHFSDQ2M296 383 aaKnown RBP23.49■■□□□ 1.35
MRPL28-208ENST00000469744 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
MRPL28-208ENST00000469744 HMGB2P26583 209 aaKnown RBP23.47■■□□□ 1.35
MRPL28-208ENST00000469744 COL5A3P25940 1745 aaPredicted RBP23.46■■□□□ 1.35
MRPL28-208ENST00000469744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
MRPL28-208ENST00000469744 GNPATO15228 680 aa23.46■■□□□ 1.35
MRPL28-208ENST00000469744 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
MRPL28-208ENST00000469744 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
MRPL28-208ENST00000469744 ZNF831Q5JPB2 1677 aa23.46■■□□□ 1.35
MRPL28-208ENST00000469744 FLAD1Q8NFF5 587 aa23.45■■□□□ 1.34
MRPL28-208ENST00000469744 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
MRPL28-208ENST00000469744 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
MRPL28-208ENST00000469744 DCAF8L1A6NGE4 600 aa23.43■■□□□ 1.34
MRPL28-208ENST00000469744 SLC52A2Q9HAB3 445 aa23.43■■□□□ 1.34
MRPL28-208ENST00000469744 MRC1P22897 1456 aa23.42■■□□□ 1.34
MRPL28-208ENST00000469744 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
MRPL28-208ENST00000469744 SSFA2P28290 1259 aa23.42■■□□□ 1.34
MRPL28-208ENST00000469744 MYH14Q7Z406 1995 aaKnown RBP23.42■■□□□ 1.34
MRPL28-208ENST00000469744 TJP1Q07157 1748 aa23.41■■□□□ 1.34
MRPL28-208ENST00000469744 UTRNP46939 3433 aa23.39■■□□□ 1.34
MRPL28-208ENST00000469744 PRKAR2BP31323 418 aa23.39■■□□□ 1.34
MRPL28-208ENST00000469744 SLC39A6Q13433 755 aa23.39■■□□□ 1.34
MRPL28-208ENST00000469744 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
MRPL28-208ENST00000469744 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
MRPL28-208ENST00000469744 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
MRPL28-208ENST00000469744 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
MRPL28-208ENST00000469744 U2AF1L5P0DN76 240 aaPredicted RBP23.37■■□□□ 1.33
MRPL28-208ENST00000469744 U2AF1Q01081 240 aaKnown RBP eCLIP23.37■■□□□ 1.33
MRPL28-208ENST00000469744 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
MRPL28-208ENST00000469744 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
MRPL28-208ENST00000469744 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
MRPL28-208ENST00000469744 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
MRPL28-208ENST00000469744 CICQ96RK0 1608 aaPredicted RBP23.35■■□□□ 1.33
MRPL28-208ENST00000469744 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
MRPL28-208ENST00000469744 C4AP0C0L4 1744 aa23.35■■□□□ 1.33
MRPL28-208ENST00000469744 KCPQ6ZWJ8 1503 aa23.34■■□□□ 1.33
MRPL28-208ENST00000469744 GNAT3A8MTJ3 354 aa23.34■■□□□ 1.33
MRPL28-208ENST00000469744 CRKLP46109 303 aaKnown RBP23.34■■□□□ 1.33
MRPL28-208ENST00000469744 IL17REQ8NFR9 667 aa23.34■■□□□ 1.33
MRPL28-208ENST00000469744 TRAPPC3LQ5T215 181 aa23.33■■□□□ 1.33
MRPL28-208ENST00000469744 SIPA1L3O60292 1781 aaPredicted RBP23.33■■□□□ 1.32
MRPL28-208ENST00000469744 YY1P25490 414 aa23.32■■□□□ 1.32
MRPL28-208ENST00000469744 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
MRPL28-208ENST00000469744 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
MRPL28-208ENST00000469744 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
MRPL28-208ENST00000469744 UBR2Q8IWV8 1755 aa23.32■■□□□ 1.32
MRPL28-208ENST00000469744 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
MRPL28-208ENST00000469744 TEFQ10587 303 aa23.3■■□□□ 1.32
MRPL28-208ENST00000469744 GPR162Q16538 588 aa23.3■■□□□ 1.32
MRPL28-208ENST00000469744 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
MRPL28-208ENST00000469744 FCHSD2O94868 740 aa23.28■■□□□ 1.32
MRPL28-208ENST00000469744 ADRA2BP18089 450 aa23.28■■□□□ 1.32
MRPL28-208ENST00000469744 RFC4P35249 363 aa23.28■■□□□ 1.32
MRPL28-208ENST00000469744 RALBP1Q15311 655 aa23.28■■□□□ 1.32
MRPL28-208ENST00000469744 INTS5Q6P9B9 1019 aaKnown RBP23.28■■□□□ 1.32
MRPL28-208ENST00000469744 MMP10P09238 476 aa23.27■■□□□ 1.32
MRPL28-208ENST00000469744 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
MRPL28-208ENST00000469744 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
MRPL28-208ENST00000469744 SRP68Q9UHB9 627 aaKnown RBP23.26■■□□□ 1.31
MRPL28-208ENST00000469744 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
MRPL28-208ENST00000469744 CHD4Q14839 1912 aa23.26■■□□□ 1.31
MRPL28-208ENST00000469744 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
MRPL28-208ENST00000469744 GYS1P13807 737 aa23.25■■□□□ 1.31
MRPL28-208ENST00000469744 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
MRPL28-208ENST00000469744 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
MRPL28-208ENST00000469744 MCM10Q7L590 875 aa23.24■■□□□ 1.31
MRPL28-208ENST00000469744 ZNF496Q96IT1 587 aaPredicted RBP23.24■■□□□ 1.31
MRPL28-208ENST00000469744 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.319e-6■□□□□ 10.4
MRPL28-208ENST00000469744 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
MRPL28-208ENST00000469744 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
MRPL28-208ENST00000469744 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
MRPL28-208ENST00000469744 DLG5Q8TDM6 1919 aa23.22■■□□□ 1.31
MRPL28-208ENST00000469744 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms