RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 FKBP4Q02790 459 aaKnown RBP eCLIP7.59□□□□□ -1.19
FAM49A-205ENST00000469507 ZNF211Q13398 564 aaPredicted RBP7.59□□□□□ -1.19
FAM49A-205ENST00000469507 ECM1Q16610 540 aa7.59□□□□□ -1.19
FAM49A-205ENST00000469507 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
FAM49A-205ENST00000469507 RECKO95980 971 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 ALDH1A1P00352 501 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 GMPRP36959 345 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 WNT7BP56706 349 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
FAM49A-205ENST00000469507 NBPF14Q5TI25 921 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 ADAM32Q8TC27 787 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 KIAA1024Q9UPX6 916 aa7.58□□□□□ -1.2
FAM49A-205ENST00000469507 BMP1P13497 986 aa7.57□□□□□ -1.2
FAM49A-205ENST00000469507 GTF2IP78347 998 aa7.57□□□□□ -1.2
FAM49A-205ENST00000469507 NAALADL2Q58DX5 795 aa7.57□□□□□ -1.2
FAM49A-205ENST00000469507 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
FAM49A-205ENST00000469507 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
FAM49A-205ENST00000469507 NXF1Q9UBU9 619 aaKnown RBP7.57□□□□□ -1.2
FAM49A-205ENST00000469507 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
FAM49A-205ENST00000469507 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
FAM49A-205ENST00000469507 SF3A1Q15459 793 aaKnown RBP7.56□□□□□ -1.2
FAM49A-205ENST00000469507 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
FAM49A-205ENST00000469507 TRIM46Q7Z4K8 759 aa7.56□□□□□ -1.2
FAM49A-205ENST00000469507 UBXN4Q92575 508 aa7.56□□□□□ -1.2
FAM49A-205ENST00000469507 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
FAM49A-205ENST00000469507 ARHGAP9Q9BRR9 750 aa7.56□□□□□ -1.2
FAM49A-205ENST00000469507 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
FAM49A-205ENST00000469507 VEGFBP49765 207 aa7.55□□□□□ -1.2
FAM49A-205ENST00000469507 ARHGAP4P98171 946 aa7.55□□□□□ -1.2
FAM49A-205ENST00000469507 ZBTB33Q86T24 672 aa7.55□□□□□ -1.2
FAM49A-205ENST00000469507 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
FAM49A-205ENST00000469507 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
FAM49A-205ENST00000469507 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
FAM49A-205ENST00000469507 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 SIAH2O43255 324 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
FAM49A-205ENST00000469507 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 RGL4Q8IZJ4 473 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 PCDHGA11Q9Y5H2 935 aa7.54□□□□□ -1.2
FAM49A-205ENST00000469507 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 SPATA32Q96LK8 384 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 NUDT12Q9BQG2 462 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 BACH2Q9BYV9 841 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
FAM49A-205ENST00000469507 M0R2N6 131 aa7.52□□□□□ -1.21
FAM49A-205ENST00000469507 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
FAM49A-205ENST00000469507 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
FAM49A-205ENST00000469507 WEE1P30291 646 aa7.52□□□□□ -1.21
FAM49A-205ENST00000469507 USP4Q13107 963 aa7.52□□□□□ -1.21
FAM49A-205ENST00000469507 PTCRAQ6ISU1 281 aaPredicted RBP7.52□□□□□ -1.21
FAM49A-205ENST00000469507 IRF7Q92985 503 aa7.52□□□□□ -1.21
FAM49A-205ENST00000469507 PPP1R1BQ9UD71 204 aaPredicted RBP7.52□□□□□ -1.21
FAM49A-205ENST00000469507 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
FAM49A-205ENST00000469507 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 SCAMP3O14828 347 aaKnown RBP7.51□□□□□ -1.21
FAM49A-205ENST00000469507 SMARCA5O60264 1052 aaPredicted RBP7.51□□□□□ -1.21
FAM49A-205ENST00000469507 GIGYF1O75420 1035 aaPredicted RBP7.51□□□□□ -1.21
FAM49A-205ENST00000469507 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
FAM49A-205ENST00000469507 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 NPAS3Q8IXF0 933 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 EHBP1Q8NDI1 1231 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 COL26A1Q96A83 441 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
FAM49A-205ENST00000469507 H3BM21 787 aa7.5□□□□□ -1.21
FAM49A-205ENST00000469507 NPR3P17342 541 aa7.5□□□□□ -1.21
FAM49A-205ENST00000469507 PSME1Q06323 249 aa7.5□□□□□ -1.21
FAM49A-205ENST00000469507 RBCK1Q9BYM8 510 aa7.5□□□□□ -1.21
FAM49A-205ENST00000469507 FAM13AO94988 1023 aa7.49□□□□□ -1.21
FAM49A-205ENST00000469507 MKNK1Q9BUB5 465 aa7.49□□□□□ -1.21
FAM49A-205ENST00000469507 WASF2Q9Y6W5 498 aa7.49□□□□□ -1.21
FAM49A-205ENST00000469507 FGD1P98174 961 aa7.48□□□□□ -1.21
FAM49A-205ENST00000469507 HDLBPQ00341 1268 aaKnown RBP7.48□□□□□ -1.21
FAM49A-205ENST00000469507 FKBP5Q13451 457 aaPredicted RBP7.48□□□□□ -1.21
FAM49A-205ENST00000469507 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
FAM49A-205ENST00000469507 CAPN12Q6ZSI9 719 aa7.48□□□□□ -1.21
FAM49A-205ENST00000469507 LGR5O75473 907 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
FAM49A-205ENST00000469507 ITGAEP38570 1179 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 SH3BP2P78314 561 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 PIK3R5Q8WYR1 880 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
FAM49A-205ENST00000469507 LDLRAD1Q5T700 205 aa7.46□□□□□ -1.22
FAM49A-205ENST00000469507 TMC7Q7Z402 723 aa7.46□□□□□ -1.22
FAM49A-205ENST00000469507 UNC93B1Q9H1C4 597 aa7.46□□□□□ -1.22
FAM49A-205ENST00000469507 PPM1GO15355 546 aaPredicted RBP7.45□□□□□ -1.22
FAM49A-205ENST00000469507 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
FAM49A-205ENST00000469507 C9orf131Q5VYM1 1079 aa7.45□□□□□ -1.22
FAM49A-205ENST00000469507 TSEN2Q8NCE0 465 aaKnown RBP7.45□□□□□ -1.22
FAM49A-205ENST00000469507 ESPNB1AK53 854 aa7.44□□□□□ -1.22
FAM49A-205ENST00000469507 TREHO43280 583 aa7.44□□□□□ -1.22
FAM49A-205ENST00000469507 FOXO3O43524 673 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms