RNA–Protein interactions for RNA: ENST00000469235.5

ARF1-202, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-202ENST00000469235 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
ARF1-202ENST00000469235 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
ARF1-202ENST00000469235 PHF14O94880 888 aa21.19■□□□□ 0.98
ARF1-202ENST00000469235 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
ARF1-202ENST00000469235 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
ARF1-202ENST00000469235 YY1P25490 414 aa21.18■□□□□ 0.98
ARF1-202ENST00000469235 ITPK1Q13572 414 aa21.18■□□□□ 0.98
ARF1-202ENST00000469235 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
ARF1-202ENST00000469235 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
ARF1-202ENST00000469235 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
ARF1-202ENST00000469235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.16■□□□□ 0.98
ARF1-202ENST00000469235 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
ARF1-202ENST00000469235 GNPATO15228 680 aa21.15■□□□□ 0.98
ARF1-202ENST00000469235 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
ARF1-202ENST00000469235 AMIGO3Q86WK7 504 aa21.15■□□□□ 0.98
ARF1-202ENST00000469235 NFATC2IPQ8NCF5 419 aa21.15■□□□□ 0.98
ARF1-202ENST00000469235 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
ARF1-202ENST00000469235 SSFA2P28290 1259 aa21.14■□□□□ 0.97
ARF1-202ENST00000469235 COL24A1Q17RW2 1714 aa21.14■□□□□ 0.97
ARF1-202ENST00000469235 PTCD1O75127 700 aaKnown RBP21.12■□□□□ 0.97
ARF1-202ENST00000469235 GPR162Q16538 588 aa21.12■□□□□ 0.97
ARF1-202ENST00000469235 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
ARF1-202ENST00000469235 SLC4A9Q96Q91 983 aa21.11■□□□□ 0.97
ARF1-202ENST00000469235 UBR3Q6ZT12 1888 aa21.1■□□□□ 0.97
ARF1-202ENST00000469235 MTHFSDQ2M296 383 aaKnown RBP21.1■□□□□ 0.97
ARF1-202ENST00000469235 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
ARF1-202ENST00000469235 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
ARF1-202ENST00000469235 RTCBQ9Y3I0 505 aaKnown RBP21.1■□□□□ 0.97
ARF1-202ENST00000469235 UTRNP46939 3433 aa21.1■□□□□ 0.97
ARF1-202ENST00000469235 NLGN2Q8NFZ4 835 aa21.09■□□□□ 0.97
ARF1-202ENST00000469235 COL3A1P02461 1466 aaPredicted RBP21.08■□□□□ 0.97
ARF1-202ENST00000469235 RNMTO43148 476 aaKnown RBP21.08■□□□□ 0.97
ARF1-202ENST00000469235 TRAPPC3LQ5T215 181 aa21.08■□□□□ 0.97
ARF1-202ENST00000469235 RC3H1Q5TC82 1133 aaKnown RBP21.08■□□□□ 0.97
ARF1-202ENST00000469235 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.97
ARF1-202ENST00000469235 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
ARF1-202ENST00000469235 SCN11AQ9UI33 1791 aa21.06■□□□□ 0.96
ARF1-202ENST00000469235 CNTNAP4Q9C0A0 1308 aa21.05■□□□□ 0.96
ARF1-202ENST00000469235 NUDCQ9Y266 331 aa21.05■□□□□ 0.96
ARF1-202ENST00000469235 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
ARF1-202ENST00000469235 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
ARF1-202ENST00000469235 CD2APQ9Y5K6 639 aa21.04■□□□□ 0.96
ARF1-202ENST00000469235 GOLGB1Q14789 3259 aaKnown RBP21.03■□□□□ 0.96
ARF1-202ENST00000469235 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
ARF1-202ENST00000469235 ADRA2BP18089 450 aa21.03■□□□□ 0.96
ARF1-202ENST00000469235 RFC4P35249 363 aa21.03■□□□□ 0.96
ARF1-202ENST00000469235 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
ARF1-202ENST00000469235 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
ARF1-202ENST00000469235 SLC39A6Q13433 755 aa21.02■□□□□ 0.96
ARF1-202ENST00000469235 ARHGEF1Q92888 912 aaKnown RBP21.02■□□□□ 0.96
ARF1-202ENST00000469235 GNAT3A8MTJ3 354 aa21■□□□□ 0.95
ARF1-202ENST00000469235 MMP10P09238 476 aa21■□□□□ 0.95
ARF1-202ENST00000469235 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
ARF1-202ENST00000469235 PRKAR2BP31323 418 aa21■□□□□ 0.95
ARF1-202ENST00000469235 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
ARF1-202ENST00000469235 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
ARF1-202ENST00000469235 COL5A3P25940 1745 aaPredicted RBP21■□□□□ 0.95
ARF1-202ENST00000469235 TEFQ10587 303 aa20.99■□□□□ 0.95
ARF1-202ENST00000469235 MRC1P22897 1456 aa20.99■□□□□ 0.95
ARF1-202ENST00000469235 GRIN3BO60391 1043 aa20.98■□□□□ 0.95
ARF1-202ENST00000469235 DNAJC10Q8IXB1 793 aa20.98■□□□□ 0.95
ARF1-202ENST00000469235 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
ARF1-202ENST00000469235 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
ARF1-202ENST00000469235 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
ARF1-202ENST00000469235 MYH14Q7Z406 1995 aaKnown RBP20.96■□□□□ 0.95
ARF1-202ENST00000469235 GYS1P13807 737 aa20.96■□□□□ 0.95
ARF1-202ENST00000469235 YBX3P16989 372 aaKnown RBP eCLIP20.96■□□□□ 0.952e-15■□□□□ 9
ARF1-202ENST00000469235 IL17REQ8NFR9 667 aa20.96■□□□□ 0.95
ARF1-202ENST00000469235 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
ARF1-202ENST00000469235 CCDC87Q9NVE4 849 aa20.96■□□□□ 0.95
ARF1-202ENST00000469235 INTS5Q6P9B9 1019 aaKnown RBP20.95■□□□□ 0.94
ARF1-202ENST00000469235 TJP1Q07157 1748 aa20.95■□□□□ 0.94
ARF1-202ENST00000469235 CHD4Q14839 1912 aa20.94■□□□□ 0.94
ARF1-202ENST00000469235 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
ARF1-202ENST00000469235 FCHSD2O94868 740 aa20.94■□□□□ 0.94
ARF1-202ENST00000469235 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
ARF1-202ENST00000469235 VSIG10Q8N0Z9 540 aa20.93■□□□□ 0.94
ARF1-202ENST00000469235 ZNF784Q8NCA9 323 aaPredicted RBP20.93■□□□□ 0.94
ARF1-202ENST00000469235 SRP68Q9UHB9 627 aaKnown RBP20.93■□□□□ 0.94
ARF1-202ENST00000469235 PARP3Q9Y6F1 533 aa20.93■□□□□ 0.94
ARF1-202ENST00000469235 WWC3Q9ULE0 1092 aa20.92■□□□□ 0.94
ARF1-202ENST00000469235 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
ARF1-202ENST00000469235 ZPR1O75312 459 aa20.91■□□□□ 0.94
ARF1-202ENST00000469235 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
ARF1-202ENST00000469235 CICQ96RK0 1608 aaPredicted RBP20.91■□□□□ 0.94
ARF1-202ENST00000469235 USP42Q9H9J4 1324 aaKnown RBP20.9■□□□□ 0.94
ARF1-202ENST00000469235 STARD3NLO95772 234 aa20.9■□□□□ 0.94
ARF1-202ENST00000469235 ZNF790Q6PG37 636 aa20.9■□□□□ 0.94
ARF1-202ENST00000469235 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
ARF1-202ENST00000469235 FKBP8Q14318 412 aa20.89■□□□□ 0.93
ARF1-202ENST00000469235 C4AP0C0L4 1744 aa20.89■□□□□ 0.93
ARF1-202ENST00000469235 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
ARF1-202ENST00000469235 NEFMP07197 916 aa20.88■□□□□ 0.93
ARF1-202ENST00000469235 ZNF496Q96IT1 587 aaPredicted RBP20.88■□□□□ 0.93
ARF1-202ENST00000469235 ZBTB1Q9Y2K1 713 aa20.88■□□□□ 0.93
ARF1-202ENST00000469235 CEMIPQ8WUJ3 1361 aa20.87■□□□□ 0.93
ARF1-202ENST00000469235 CANXP27824 592 aaKnown RBP20.87■□□□□ 0.93
ARF1-202ENST00000469235 USPL1Q5W0Q7 1092 aa20.87■□□□□ 0.93
ARF1-202ENST00000469235 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
ARF1-202ENST00000469235 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms