RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 GJD4Q96KN9 370 aaPredicted RBP16.58■□□□□ 0.24
RUNX1-213ENST00000469087 KCNQ3O43525 872 aa16.57■□□□□ 0.24
RUNX1-213ENST00000469087 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
RUNX1-213ENST00000469087 SIPA1L3O60292 1781 aaPredicted RBP16.57■□□□□ 0.24
RUNX1-213ENST00000469087 PLIN1O60240 522 aa16.56■□□□□ 0.24
RUNX1-213ENST00000469087 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
RUNX1-213ENST00000469087 TRPC5Q9UL62 973 aaPredicted RBP16.56■□□□□ 0.24
RUNX1-213ENST00000469087 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
RUNX1-213ENST00000469087 CABP4P57796 275 aa16.56■□□□□ 0.24
RUNX1-213ENST00000469087 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
RUNX1-213ENST00000469087 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
RUNX1-213ENST00000469087 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
RUNX1-213ENST00000469087 ATRNO75882 1429 aa16.55■□□□□ 0.24
RUNX1-213ENST00000469087 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
RUNX1-213ENST00000469087 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
RUNX1-213ENST00000469087 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
RUNX1-213ENST00000469087 MARCH10Q8NA82 808 aaPredicted RBP16.54■□□□□ 0.24
RUNX1-213ENST00000469087 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
RUNX1-213ENST00000469087 GLI3P10071 1580 aa16.54■□□□□ 0.24
RUNX1-213ENST00000469087 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
RUNX1-213ENST00000469087 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
RUNX1-213ENST00000469087 MRC1P22897 1456 aa16.53■□□□□ 0.24
RUNX1-213ENST00000469087 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
RUNX1-213ENST00000469087 FKBP8Q14318 412 aa16.53■□□□□ 0.24
RUNX1-213ENST00000469087 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
RUNX1-213ENST00000469087 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 A0A0G2JS52 829 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
RUNX1-213ENST00000469087 NEFLP07196 543 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 MYT1Q01538 1121 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 SMC4Q9NTJ3 1288 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
RUNX1-213ENST00000469087 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
RUNX1-213ENST00000469087 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
RUNX1-213ENST00000469087 PIGBQ92521 554 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
RUNX1-213ENST00000469087 ITGB4P16144 1822 aa16.48■□□□□ 0.23
RUNX1-213ENST00000469087 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
RUNX1-213ENST00000469087 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
RUNX1-213ENST00000469087 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
RUNX1-213ENST00000469087 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
RUNX1-213ENST00000469087 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
RUNX1-213ENST00000469087 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
RUNX1-213ENST00000469087 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
RUNX1-213ENST00000469087 SEPT12Q8IYM1 358 aa16.47■□□□□ 0.23
RUNX1-213ENST00000469087 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
RUNX1-213ENST00000469087 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
RUNX1-213ENST00000469087 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
RUNX1-213ENST00000469087 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
RUNX1-213ENST00000469087 HOXB7P09629 217 aa16.46■□□□□ 0.22
RUNX1-213ENST00000469087 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.22
RUNX1-213ENST00000469087 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.22
RUNX1-213ENST00000469087 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
RUNX1-213ENST00000469087 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
RUNX1-213ENST00000469087 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
RUNX1-213ENST00000469087 BCL9O00512 1426 aa16.45■□□□□ 0.22
RUNX1-213ENST00000469087 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
RUNX1-213ENST00000469087 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
RUNX1-213ENST00000469087 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
RUNX1-213ENST00000469087 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
RUNX1-213ENST00000469087 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
RUNX1-213ENST00000469087 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
RUNX1-213ENST00000469087 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
RUNX1-213ENST00000469087 ZKSCAN2Q63HK3 967 aa16.43■□□□□ 0.22
RUNX1-213ENST00000469087 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
RUNX1-213ENST00000469087 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
RUNX1-213ENST00000469087 KCNQ2O43526 872 aa16.43■□□□□ 0.22
RUNX1-213ENST00000469087 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
RUNX1-213ENST00000469087 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
RUNX1-213ENST00000469087 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 TRIM27P14373 513 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
RUNX1-213ENST00000469087 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
RUNX1-213ENST00000469087 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
RUNX1-213ENST00000469087 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 STK31Q9BXU1 1019 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 RLBP1P12271 317 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 G2E3Q7L622 706 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
RUNX1-213ENST00000469087 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
RUNX1-213ENST00000469087 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
RUNX1-213ENST00000469087 C5P01031 1676 aa16.39■□□□□ 0.21
RUNX1-213ENST00000469087 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
RUNX1-213ENST00000469087 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
RUNX1-213ENST00000469087 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
RUNX1-213ENST00000469087 RXRBP28702 533 aa16.38■□□□□ 0.21
RUNX1-213ENST00000469087 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
RUNX1-213ENST00000469087 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
RUNX1-213ENST00000469087 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
RUNX1-213ENST00000469087 POTEAQ6S8J7 498 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms