RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 LY75O60449 1722 aa11.53□□□□□ -0.56
SYN3-210ENST00000468922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
SYN3-210ENST00000468922 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
SYN3-210ENST00000468922 PLEKHG2Q9H7P9 1386 aa11.53□□□□□ -0.56
SYN3-210ENST00000468922 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
SYN3-210ENST00000468922 HSPA1AP0DMV8 641 aaKnown RBP11.52□□□□□ -0.57
SYN3-210ENST00000468922 HSPA1BP0DMV9 641 aaKnown RBP11.52□□□□□ -0.57
SYN3-210ENST00000468922 TGFB2P61812 414 aa11.52□□□□□ -0.57
SYN3-210ENST00000468922 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
SYN3-210ENST00000468922 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 MPRIPQ6WCQ1 1025 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 AMIGO3Q86WK7 504 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
SYN3-210ENST00000468922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYN3-210ENST00000468922 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 PALLDQ8WX93 1383 aa11.51□□□□□ -0.57
SYN3-210ENST00000468922 A0A0G2JLW4 131 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 CYP27B1O15528 508 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 FCHSD2O94868 740 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 SSFA2P28290 1259 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 RRAGCQ9HB90 399 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
SYN3-210ENST00000468922 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
SYN3-210ENST00000468922 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
SYN3-210ENST00000468922 MMP10P09238 476 aa11.49□□□□□ -0.57
SYN3-210ENST00000468922 MTHFSP49914 203 aa11.49□□□□□ -0.57
SYN3-210ENST00000468922 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
SYN3-210ENST00000468922 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
SYN3-210ENST00000468922 IL13P35225 146 aa11.48□□□□□ -0.57
SYN3-210ENST00000468922 SPG7Q9UQ90 795 aa11.48□□□□□ -0.57
SYN3-210ENST00000468922 PXDNLA1KZ92 1463 aa11.47□□□□□ -0.57
SYN3-210ENST00000468922 KDRP35968 1356 aa11.47□□□□□ -0.57
SYN3-210ENST00000468922 DPEP1P16444 411 aa11.46□□□□□ -0.57
SYN3-210ENST00000468922 C5P01031 1676 aa11.46□□□□□ -0.58
SYN3-210ENST00000468922 GNPATO15228 680 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 PHKG2P15735 406 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 RNF181Q9P0P0 153 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
SYN3-210ENST00000468922 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
SYN3-210ENST00000468922 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 SIK1P57059 783 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 KCPQ6ZWJ8 1503 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 ITGB4P16144 1822 aa11.44□□□□□ -0.58
SYN3-210ENST00000468922 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
SYN3-210ENST00000468922 KCNA4P22459 653 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
SYN3-210ENST00000468922 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 PIGBQ92521 554 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
SYN3-210ENST00000468922 KCNA3P22001 575 aa11.42□□□□□ -0.58
SYN3-210ENST00000468922 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
SYN3-210ENST00000468922 DALRD3Q5D0E6 543 aaKnown RBP11.42□□□□□ -0.58
SYN3-210ENST00000468922 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SYN3-210ENST00000468922 PCNTO95613 3336 aa11.41□□□□□ -0.58
SYN3-210ENST00000468922 VEGFAP15692 232 aaPredicted RBP11.41□□□□□ -0.58
SYN3-210ENST00000468922 ITPK1Q13572 414 aa11.41□□□□□ -0.58
SYN3-210ENST00000468922 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
SYN3-210ENST00000468922 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
SYN3-210ENST00000468922 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
SYN3-210ENST00000468922 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
SYN3-210ENST00000468922 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
SYN3-210ENST00000468922 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
SYN3-210ENST00000468922 ERVV-2B6SEH9 535 aa11.39□□□□□ -0.59
SYN3-210ENST00000468922 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
SYN3-210ENST00000468922 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
SYN3-210ENST00000468922 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
SYN3-210ENST00000468922 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
SYN3-210ENST00000468922 HMOX1P09601 288 aa11.38□□□□□ -0.59
SYN3-210ENST00000468922 RFC4P35249 363 aa11.38□□□□□ -0.59
SYN3-210ENST00000468922 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
SYN3-210ENST00000468922 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
SYN3-210ENST00000468922 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
SYN3-210ENST00000468922 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
SYN3-210ENST00000468922 GYS1P13807 737 aa11.37□□□□□ -0.59
SYN3-210ENST00000468922 ADRA2BP18089 450 aa11.37□□□□□ -0.59
SYN3-210ENST00000468922 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
SYN3-210ENST00000468922 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
SYN3-210ENST00000468922 UBR3Q6ZT12 1888 aa11.37□□□□□ -0.59
SYN3-210ENST00000468922 ZC3H4Q9UPT8 1303 aaKnown RBP11.36□□□□□ -0.59
SYN3-210ENST00000468922 N4BP2Q86UW6 1770 aaPredicted RBP11.36□□□□□ -0.59
SYN3-210ENST00000468922 FOXN1O15353 648 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
SYN3-210ENST00000468922 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms