RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 RASA1P20936 1047 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 GPC1P35052 558 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 PTK7Q13308 1070 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
XRN1-207ENST00000468894 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
XRN1-207ENST00000468894 FAM196BA6NMK8 535 aa10.77□□□□□ -0.69
XRN1-207ENST00000468894 MAN1A2O60476 641 aa10.77□□□□□ -0.69
XRN1-207ENST00000468894 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
XRN1-207ENST00000468894 CENPCQ03188 943 aa10.76□□□□□ -0.69
XRN1-207ENST00000468894 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
XRN1-207ENST00000468894 ZNF358Q9NW07 568 aa10.76□□□□□ -0.69
XRN1-207ENST00000468894 TLR1Q15399 786 aa10.75□□□□□ -0.69
XRN1-207ENST00000468894 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
XRN1-207ENST00000468894 PBXIP1Q96AQ6 731 aa10.75□□□□□ -0.69
XRN1-207ENST00000468894 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
XRN1-207ENST00000468894 SERTAD1Q9UHV2 236 aa10.75□□□□□ -0.69
XRN1-207ENST00000468894 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.74□□□□□ -0.69
XRN1-207ENST00000468894 SLC4A9Q96Q91 983 aa10.74□□□□□ -0.69
XRN1-207ENST00000468894 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
XRN1-207ENST00000468894 LYSMD3Q7Z3D4 306 aa10.73□□□□□ -0.69
XRN1-207ENST00000468894 ARXQ96QS3 562 aa10.73□□□□□ -0.69
XRN1-207ENST00000468894 ARID3AQ99856 593 aa10.73□□□□□ -0.69
XRN1-207ENST00000468894 SFI1A8K8P3 1242 aa10.72□□□□□ -0.69
XRN1-207ENST00000468894 SMTNP53814 917 aa10.72□□□□□ -0.69
XRN1-207ENST00000468894 DPYDQ12882 1025 aa10.72□□□□□ -0.69
XRN1-207ENST00000468894 PRICKLE2Q7Z3G6 844 aa10.72□□□□□ -0.69
XRN1-207ENST00000468894 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
XRN1-207ENST00000468894 EPHA4P54764 986 aa10.71□□□□□ -0.69
XRN1-207ENST00000468894 MTFR1Q15390 333 aa10.71□□□□□ -0.69
XRN1-207ENST00000468894 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.69
XRN1-207ENST00000468894 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
XRN1-207ENST00000468894 A6NJY4 79 aa10.7□□□□□ -0.7
XRN1-207ENST00000468894 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
XRN1-207ENST00000468894 RHOQP17081 205 aa10.7□□□□□ -0.7
XRN1-207ENST00000468894 ZMIZ1Q9ULJ6 1067 aa10.7□□□□□ -0.7
XRN1-207ENST00000468894 IQSEC3Q9UPP2 1182 aaPredicted RBP10.7□□□□□ -0.7
XRN1-207ENST00000468894 SENP3-EIF4A1A0A087X0R7 540 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 M0R2N6 131 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 BACH1O14867 736 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 ATG7O95352 703 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 SEC13P55735 322 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 POU4F2Q12837 409 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 ZNF295-AS1Q8N0V1 137 aa10.69□□□□□ -0.7
XRN1-207ENST00000468894 TSEN2Q8NCE0 465 aaKnown RBP10.69□□□□□ -0.7
XRN1-207ENST00000468894 NOVA2Q9UNW9 492 aaKnown RBP10.69□□□□□ -0.7
XRN1-207ENST00000468894 PTSQ03393 145 aa10.68□□□□□ -0.7
XRN1-207ENST00000468894 NBPF10Q6P3W6 841 aaKnown RBP10.68□□□□□ -0.7
XRN1-207ENST00000468894 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
XRN1-207ENST00000468894 TNS4Q8IZW8 715 aa10.68□□□□□ -0.7
XRN1-207ENST00000468894 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
XRN1-207ENST00000468894 FOXK2Q01167 660 aa10.67□□□□□ -0.7
XRN1-207ENST00000468894 ELOAQ14241 798 aaKnown RBP10.67□□□□□ -0.7
XRN1-207ENST00000468894 STK32AQ8WU08 396 aa10.67□□□□□ -0.7
XRN1-207ENST00000468894 SCHIP1Q9P0W5 487 aaPredicted RBP10.67□□□□□ -0.7
XRN1-207ENST00000468894 RBM19Q9Y4C8 960 aaKnown RBP10.67□□□□□ -0.7
XRN1-207ENST00000468894 C4orf17Q53FE4 359 aa10.66□□□□□ -0.7
XRN1-207ENST00000468894 TMEM214Q6NUQ4 689 aaKnown RBP10.66□□□□□ -0.7
XRN1-207ENST00000468894 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
XRN1-207ENST00000468894 RHBDD1Q8TEB9 315 aa10.66□□□□□ -0.7
XRN1-207ENST00000468894 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
XRN1-207ENST00000468894 CDK2AP1O14519 115 aa10.65□□□□□ -0.7
XRN1-207ENST00000468894 GNASQ5JWF2 1037 aa10.65□□□□□ -0.7
XRN1-207ENST00000468894 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
XRN1-207ENST00000468894 SLC9A9Q8IVB4 645 aa10.64□□□□□ -0.71
XRN1-207ENST00000468894 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
XRN1-207ENST00000468894 GTF2E1P29083 439 aaPredicted RBP10.63□□□□□ -0.71
XRN1-207ENST00000468894 PHKA2P46019 1235 aa10.63□□□□□ -0.71
XRN1-207ENST00000468894 WDR44Q5JSH3 913 aa10.63□□□□□ -0.71
XRN1-207ENST00000468894 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
XRN1-207ENST00000468894 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
XRN1-207ENST00000468894 LGR5O75473 907 aa10.62□□□□□ -0.71
XRN1-207ENST00000468894 PLA2G4AP47712 749 aa10.62□□□□□ -0.71
XRN1-207ENST00000468894 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
XRN1-207ENST00000468894 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
XRN1-207ENST00000468894 NXF1Q9UBU9 619 aaKnown RBP10.62□□□□□ -0.71
XRN1-207ENST00000468894 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
XRN1-207ENST00000468894 VEGFBP49765 207 aa10.61□□□□□ -0.71
XRN1-207ENST00000468894 ZDHHC1Q8WTX9 485 aa10.61□□□□□ -0.71
XRN1-207ENST00000468894 NIFKQ9BYG3 293 aaKnown RBP10.61□□□□□ -0.71
XRN1-207ENST00000468894 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
XRN1-207ENST00000468894 C21orf2O43822 256 aa10.6□□□□□ -0.71
XRN1-207ENST00000468894 FAM69CQ0P6D2 419 aa10.6□□□□□ -0.71
XRN1-207ENST00000468894 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
XRN1-207ENST00000468894 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
XRN1-207ENST00000468894 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
XRN1-207ENST00000468894 CABP1Q9NZU7 370 aa10.59□□□□□ -0.71
XRN1-207ENST00000468894 H3BM21 787 aa10.58□□□□□ -0.72
XRN1-207ENST00000468894 TERTO14746 1132 aaKnown RBP10.58□□□□□ -0.72
XRN1-207ENST00000468894 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
XRN1-207ENST00000468894 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
XRN1-207ENST00000468894 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
XRN1-207ENST00000468894 ITGA6P23229 1130 aa10.57□□□□□ -0.72
XRN1-207ENST00000468894 PSMA6P60900 246 aaKnown RBP10.57□□□□□ -0.72
XRN1-207ENST00000468894 TEAD4Q15561 434 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms