RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GAS6Q14393 721 aa10.05□□□□□ -0.8
LSM5-209ENST00000468872 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
LSM5-209ENST00000468872 POM121CA8CG34 1229 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 F11P03951 625 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 INHAP05111 366 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 GDF10P55107 478 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 TLR1Q15399 786 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
LSM5-209ENST00000468872 GPR25O00155 361 aa10.03□□□□□ -0.8
LSM5-209ENST00000468872 SKIP12755 728 aa10.03□□□□□ -0.8
LSM5-209ENST00000468872 C4orf17Q53FE4 359 aa10.03□□□□□ -0.8
LSM5-209ENST00000468872 FOXR1Q6PIV2 292 aa10.03□□□□□ -0.8
LSM5-209ENST00000468872 NFATC2IPQ8NCF5 419 aa10.03□□□□□ -0.8
LSM5-209ENST00000468872 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
LSM5-209ENST00000468872 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.81
LSM5-209ENST00000468872 PPARGC1BQ86YN6 1023 aaKnown RBP10.02□□□□□ -0.81
LSM5-209ENST00000468872 GTPBP3Q969Y2 492 aaKnown RBP10.02□□□□□ -0.81
LSM5-209ENST00000468872 ADAMTS2O95450 1211 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 SRSF11Q05519 484 aaKnown RBP10.01□□□□□ -0.81
LSM5-209ENST00000468872 EML3Q32P44 896 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 ADAMTS19Q8TE59 1207 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 RHBDD1Q8TEB9 315 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 NUCKS1Q9H1E3 243 aaKnown RBP10.01□□□□□ -0.81
LSM5-209ENST00000468872 GPAMQ9HCL2 828 aa10.01□□□□□ -0.81
LSM5-209ENST00000468872 PCDHGA11Q9Y5H2 935 aa10□□□□□ -0.81
LSM5-209ENST00000468872 TMEM229AB2RXF0 380 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 LZTS3O60299 673 aaPredicted RBP9.99□□□□□ -0.81
LSM5-209ENST00000468872 THBS1P07996 1170 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 NOD1Q9Y239 953 aa9.99□□□□□ -0.81
LSM5-209ENST00000468872 USP17L5A8MUK1 530 aa9.98□□□□□ -0.81
LSM5-209ENST00000468872 SMTNP53814 917 aa9.98□□□□□ -0.81
LSM5-209ENST00000468872 NCOA4Q13772 614 aa9.98□□□□□ -0.81
LSM5-209ENST00000468872 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
LSM5-209ENST00000468872 A6NJR5 290 aa9.97□□□□□ -0.81
LSM5-209ENST00000468872 HDGFL1Q5TGJ6 251 aa9.97□□□□□ -0.81
LSM5-209ENST00000468872 DEPDC4Q8N2C3 294 aa9.97□□□□□ -0.81
LSM5-209ENST00000468872 SLC4A9Q96Q91 983 aa9.97□□□□□ -0.81
LSM5-209ENST00000468872 MSX1P28360 303 aa9.96□□□□□ -0.82
LSM5-209ENST00000468872 GTF2IP78347 998 aa9.96□□□□□ -0.82
LSM5-209ENST00000468872 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.82
LSM5-209ENST00000468872 ARHGEF15O94989 841 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 PGBD3Q8N328 593 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 FNBP4Q8N3X1 1017 aaPredicted RBP9.95□□□□□ -0.82
LSM5-209ENST00000468872 UCN2Q96RP3 112 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 RUBCNLQ9H714 662 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 IGF1RP08069 1367 aa9.95□□□□□ -0.82
LSM5-209ENST00000468872 LBRQ14739 615 aaKnown RBP9.94□□□□□ -0.82
LSM5-209ENST00000468872 MTFR1Q15390 333 aa9.94□□□□□ -0.82
LSM5-209ENST00000468872 LYPD4Q6UWN0 246 aa9.94□□□□□ -0.82
LSM5-209ENST00000468872 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
LSM5-209ENST00000468872 PROSER2Q86WR7 435 aaPredicted RBP9.94□□□□□ -0.82
LSM5-209ENST00000468872 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
LSM5-209ENST00000468872 A6NJY4 79 aa9.93□□□□□ -0.82
LSM5-209ENST00000468872 PSME1Q06323 249 aa9.93□□□□□ -0.82
LSM5-209ENST00000468872 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
LSM5-209ENST00000468872 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
LSM5-209ENST00000468872 ARXQ96QS3 562 aa9.93□□□□□ -0.82
LSM5-209ENST00000468872 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
LSM5-209ENST00000468872 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
LSM5-209ENST00000468872 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 CDK2AP1O14519 115 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 BACH1O14867 736 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 CELA2BP08218 269 aaPredicted RBP9.92□□□□□ -0.82
LSM5-209ENST00000468872 MX2P20592 715 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 CFHR5Q9BXR6 569 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 USP3Q9Y6I4 520 aa9.92□□□□□ -0.82
LSM5-209ENST00000468872 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
LSM5-209ENST00000468872 ATP9BO43861 1147 aa9.91□□□□□ -0.82
LSM5-209ENST00000468872 EFHC2Q5JST6 749 aa9.91□□□□□ -0.82
LSM5-209ENST00000468872 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
LSM5-209ENST00000468872 CRISPLD1Q9H336 500 aa9.91□□□□□ -0.82
LSM5-209ENST00000468872 ZNF358Q9NW07 568 aa9.91□□□□□ -0.82
LSM5-209ENST00000468872 ATP4AP20648 1035 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 TRIM50Q86XT4 487 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 C1orf216Q8TAB5 229 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 PHF24Q9UPV7 400 aa9.9□□□□□ -0.82
LSM5-209ENST00000468872 KCNMA1Q12791 1236 aa9.89□□□□□ -0.83
LSM5-209ENST00000468872 GLMNQ92990 594 aa9.89□□□□□ -0.83
LSM5-209ENST00000468872 NSFL1CQ9UNZ2 370 aaKnown RBP9.89□□□□□ -0.83
LSM5-209ENST00000468872 GSK3AP49840 483 aa9.88□□□□□ -0.83
LSM5-209ENST00000468872 ACDQ96AP0 544 aa9.88□□□□□ -0.83
LSM5-209ENST00000468872 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
LSM5-209ENST00000468872 SCHIP1Q9P0W5 487 aaPredicted RBP9.88□□□□□ -0.83
LSM5-209ENST00000468872 KIAA1024Q9UPX6 916 aa9.88□□□□□ -0.83
LSM5-209ENST00000468872 ZBTB7BO15156 539 aaPredicted RBP9.87□□□□□ -0.83
LSM5-209ENST00000468872 ATP1A2P50993 1020 aa9.87□□□□□ -0.83
LSM5-209ENST00000468872 CLDN10P78369 228 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms