RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 PIGBQ92521 554 aa15.88■□□□□ 0.13
NEDD9-207ENST00000468612 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
NEDD9-207ENST00000468612 ROCK2O75116 1388 aaKnown RBP15.87■□□□□ 0.13
NEDD9-207ENST00000468612 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
NEDD9-207ENST00000468612 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
NEDD9-207ENST00000468612 ITPK1Q13572 414 aa15.86■□□□□ 0.13
NEDD9-207ENST00000468612 CCDC87Q9NVE4 849 aa15.86■□□□□ 0.13
NEDD9-207ENST00000468612 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
NEDD9-207ENST00000468612 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
NEDD9-207ENST00000468612 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
NEDD9-207ENST00000468612 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
NEDD9-207ENST00000468612 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
NEDD9-207ENST00000468612 TMF1P82094 1093 aa15.84■□□□□ 0.13
NEDD9-207ENST00000468612 COG3Q96JB2 828 aa15.84■□□□□ 0.13
NEDD9-207ENST00000468612 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
NEDD9-207ENST00000468612 SBF1O95248 1867 aa15.82■□□□□ 0.12
NEDD9-207ENST00000468612 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
NEDD9-207ENST00000468612 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
NEDD9-207ENST00000468612 RRS1Q15050 365 aaKnown RBP15.81■□□□□ 0.12
NEDD9-207ENST00000468612 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
NEDD9-207ENST00000468612 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
NEDD9-207ENST00000468612 GYS1P13807 737 aa15.8■□□□□ 0.12
NEDD9-207ENST00000468612 VEGFAP15692 232 aaPredicted RBP15.8■□□□□ 0.12
NEDD9-207ENST00000468612 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
NEDD9-207ENST00000468612 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
NEDD9-207ENST00000468612 ASAP1Q9ULH1 1129 aa15.8■□□□□ 0.12
NEDD9-207ENST00000468612 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
NEDD9-207ENST00000468612 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
NEDD9-207ENST00000468612 PRDM10Q9NQV6 1147 aa15.79■□□□□ 0.12
NEDD9-207ENST00000468612 RTCBQ9Y3I0 505 aaKnown RBP15.79■□□□□ 0.12
NEDD9-207ENST00000468612 FOXN1O15353 648 aa15.78■□□□□ 0.12
NEDD9-207ENST00000468612 ADRA2BP18089 450 aa15.78■□□□□ 0.12
NEDD9-207ENST00000468612 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
NEDD9-207ENST00000468612 PUS7Q96PZ0 661 aaKnown RBP15.78■□□□□ 0.12
NEDD9-207ENST00000468612 INSRP06213 1382 aa15.77■□□□□ 0.12
NEDD9-207ENST00000468612 KDRP35968 1356 aa15.77■□□□□ 0.12
NEDD9-207ENST00000468612 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
NEDD9-207ENST00000468612 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.12
NEDD9-207ENST00000468612 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
NEDD9-207ENST00000468612 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
NEDD9-207ENST00000468612 RASSF7Q02833 373 aa15.75■□□□□ 0.11
NEDD9-207ENST00000468612 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
NEDD9-207ENST00000468612 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
NEDD9-207ENST00000468612 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
NEDD9-207ENST00000468612 POTECB2RU33 542 aa15.74■□□□□ 0.11
NEDD9-207ENST00000468612 CHRNA5P30532 468 aa15.74■□□□□ 0.11
NEDD9-207ENST00000468612 RFC4P35249 363 aa15.74■□□□□ 0.11
NEDD9-207ENST00000468612 SLC4A9Q96Q91 983 aa15.74■□□□□ 0.11
NEDD9-207ENST00000468612 CREBZFQ9NS37 354 aa15.74■□□□□ 0.11
NEDD9-207ENST00000468612 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
NEDD9-207ENST00000468612 CNTNAP4Q9C0A0 1308 aa15.73■□□□□ 0.11
NEDD9-207ENST00000468612 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
NEDD9-207ENST00000468612 MKRN1Q9UHC7 482 aaKnown RBP15.73■□□□□ 0.11
NEDD9-207ENST00000468612 FLT4P35916 1363 aa15.73■□□□□ 0.11
NEDD9-207ENST00000468612 LMNB1P20700 586 aa15.72■□□□□ 0.11
NEDD9-207ENST00000468612 DDR1Q08345 913 aa15.72■□□□□ 0.11
NEDD9-207ENST00000468612 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
NEDD9-207ENST00000468612 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
NEDD9-207ENST00000468612 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.11
NEDD9-207ENST00000468612 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
NEDD9-207ENST00000468612 CNTNAP1P78357 1384 aa15.71■□□□□ 0.11
NEDD9-207ENST00000468612 FYB1O15117 783 aa15.7■□□□□ 0.1
NEDD9-207ENST00000468612 FKBP8Q14318 412 aa15.69■□□□□ 0.1
NEDD9-207ENST00000468612 ABHD8Q96I13 439 aa15.69■□□□□ 0.1
NEDD9-207ENST00000468612 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
NEDD9-207ENST00000468612 GGNBP2Q9H3C7 697 aa15.69■□□□□ 0.1
NEDD9-207ENST00000468612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
NEDD9-207ENST00000468612 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
NEDD9-207ENST00000468612 TIAM2Q8IVF5 1701 aa15.68■□□□□ 0.1
NEDD9-207ENST00000468612 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
NEDD9-207ENST00000468612 PHKG2P15735 406 aa15.68■□□□□ 0.1
NEDD9-207ENST00000468612 SRP68Q9UHB9 627 aaKnown RBP15.68■□□□□ 0.1
NEDD9-207ENST00000468612 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
NEDD9-207ENST00000468612 IFNL2Q8IZJ0 200 aa15.67■□□□□ 0.1
NEDD9-207ENST00000468612 AIDAQ96BJ3 306 aa15.67■□□□□ 0.1
NEDD9-207ENST00000468612 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
NEDD9-207ENST00000468612 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
NEDD9-207ENST00000468612 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
NEDD9-207ENST00000468612 SIN3AQ96ST3 1273 aa15.66■□□□□ 0.1
NEDD9-207ENST00000468612 TM4SF1P30408 202 aa15.65■□□□□ 0.1
NEDD9-207ENST00000468612 RGS19P49795 217 aa15.65■□□□□ 0.1
NEDD9-207ENST00000468612 LBX1P52954 281 aa15.65■□□□□ 0.1
NEDD9-207ENST00000468612 WBP1LQ9NX94 342 aa15.65■□□□□ 0.1
NEDD9-207ENST00000468612 NFKBIEO00221 500 aa15.64■□□□□ 0.09
NEDD9-207ENST00000468612 VEGFBP49765 207 aa15.64■□□□□ 0.09
NEDD9-207ENST00000468612 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
NEDD9-207ENST00000468612 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
NEDD9-207ENST00000468612 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
NEDD9-207ENST00000468612 TESK2Q96S53 571 aa15.63■□□□□ 0.09
NEDD9-207ENST00000468612 EMILIN1Q9Y6C2 1016 aa15.63■□□□□ 0.09
NEDD9-207ENST00000468612 PASKQ96RG2 1323 aa15.63■□□□□ 0.09
NEDD9-207ENST00000468612 ERVV-2B6SEH9 535 aa15.62■□□□□ 0.09
NEDD9-207ENST00000468612 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
NEDD9-207ENST00000468612 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
NEDD9-207ENST00000468612 HSPA8P11142 646 aaKnown RBP15.62■□□□□ 0.09
NEDD9-207ENST00000468612 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
NEDD9-207ENST00000468612 EYA1Q99502 592 aa15.62■□□□□ 0.09
NEDD9-207ENST00000468612 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
NEDD9-207ENST00000468612 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
NEDD9-207ENST00000468612 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms