RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 SIK1P57059 783 aa19.72■□□□□ 0.75
PCOLCE-204ENST00000468214 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
PCOLCE-204ENST00000468214 SLC16A10Q8TF71 515 aa19.72■□□□□ 0.75
PCOLCE-204ENST00000468214 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
PCOLCE-204ENST00000468214 AK7Q96M32 723 aa19.71■□□□□ 0.75
PCOLCE-204ENST00000468214 SCN11AQ9UI33 1791 aa19.7■□□□□ 0.74
PCOLCE-204ENST00000468214 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
PCOLCE-204ENST00000468214 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCOLCE-204ENST00000468214 AKAP4Q5JQC9 854 aa19.7■□□□□ 0.74
PCOLCE-204ENST00000468214 ATG3Q9NT62 314 aa19.7■□□□□ 0.74
PCOLCE-204ENST00000468214 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
PCOLCE-204ENST00000468214 POLD1P28340 1107 aa19.68■□□□□ 0.74
PCOLCE-204ENST00000468214 RBM42Q9BTD8 480 aaKnown RBP19.68■□□□□ 0.74
PCOLCE-204ENST00000468214 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
PCOLCE-204ENST00000468214 COL23A1Q86Y22 540 aaPredicted RBP19.67■□□□□ 0.74
PCOLCE-204ENST00000468214 FLAD1Q8NFF5 587 aa19.67■□□□□ 0.74
PCOLCE-204ENST00000468214 ARXQ96QS3 562 aa19.67■□□□□ 0.74
PCOLCE-204ENST00000468214 SGIP1Q9BQI5 828 aa19.67■□□□□ 0.74
PCOLCE-204ENST00000468214 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
PCOLCE-204ENST00000468214 MTHFSDQ2M296 383 aaKnown RBP19.66■□□□□ 0.74
PCOLCE-204ENST00000468214 NFATC2IPQ8NCF5 419 aa19.66■□□□□ 0.74
PCOLCE-204ENST00000468214 LINC00116Q8NCU8 138 aa19.66■□□□□ 0.74
PCOLCE-204ENST00000468214 PHF14O94880 888 aa19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 ITPK1Q13572 414 aa19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
PCOLCE-204ENST00000468214 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
PCOLCE-204ENST00000468214 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
PCOLCE-204ENST00000468214 FCHSD2O94868 740 aa19.63■□□□□ 0.73
PCOLCE-204ENST00000468214 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
PCOLCE-204ENST00000468214 GNPATO15228 680 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 RNMTO43148 476 aaKnown RBP19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 SLC52A2Q9HAB3 445 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 UBR3Q6ZT12 1888 aa19.62■□□□□ 0.73
PCOLCE-204ENST00000468214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
PCOLCE-204ENST00000468214 SYT17Q9BSW7 474 aa19.61■□□□□ 0.73
PCOLCE-204ENST00000468214 ADAMTS7Q9UKP4 1686 aa19.61■□□□□ 0.73
PCOLCE-204ENST00000468214 SSFA2P28290 1259 aa19.6■□□□□ 0.73
PCOLCE-204ENST00000468214 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
PCOLCE-204ENST00000468214 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
PCOLCE-204ENST00000468214 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
PCOLCE-204ENST00000468214 SLC4A9Q96Q91 983 aa19.59■□□□□ 0.73
PCOLCE-204ENST00000468214 SIPA1L3O60292 1781 aaPredicted RBP19.59■□□□□ 0.73
PCOLCE-204ENST00000468214 NEFMP07197 916 aa19.58■□□□□ 0.72
PCOLCE-204ENST00000468214 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.72
PCOLCE-204ENST00000468214 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.72
PCOLCE-204ENST00000468214 MRC1P22897 1456 aa19.58■□□□□ 0.72
PCOLCE-204ENST00000468214 ZNF831Q5JPB2 1677 aa19.58■□□□□ 0.72
PCOLCE-204ENST00000468214 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
PCOLCE-204ENST00000468214 PHACTR3Q96KR7 559 aa19.57■□□□□ 0.72
PCOLCE-204ENST00000468214 ADAMTS8Q9UP79 889 aa19.57■□□□□ 0.72
PCOLCE-204ENST00000468214 RTCBQ9Y3I0 505 aaKnown RBP19.57■□□□□ 0.72
PCOLCE-204ENST00000468214 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
PCOLCE-204ENST00000468214 TEFQ10587 303 aa19.56■□□□□ 0.72
PCOLCE-204ENST00000468214 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 COL5A3P25940 1745 aaPredicted RBP19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 SLC39A6Q13433 755 aa19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 RC3H1Q5TC82 1133 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
PCOLCE-204ENST00000468214 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
PCOLCE-204ENST00000468214 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
PCOLCE-204ENST00000468214 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
PCOLCE-204ENST00000468214 MIER1Q8N108 512 aa19.54■□□□□ 0.72
PCOLCE-204ENST00000468214 ADRA2BP18089 450 aa19.52■□□□□ 0.72
PCOLCE-204ENST00000468214 CRKLP46109 303 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-204ENST00000468214 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
PCOLCE-204ENST00000468214 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
PCOLCE-204ENST00000468214 TJP1Q07157 1748 aa19.51■□□□□ 0.71
PCOLCE-204ENST00000468214 RPS6KA4O75676 772 aa19.51■□□□□ 0.71
PCOLCE-204ENST00000468214 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
PCOLCE-204ENST00000468214 RUNDC1Q96C34 613 aa19.51■□□□□ 0.71
PCOLCE-204ENST00000468214 MYH14Q7Z406 1995 aaKnown RBP19.51■□□□□ 0.71
PCOLCE-204ENST00000468214 RFC4P35249 363 aa19.5■□□□□ 0.71
PCOLCE-204ENST00000468214 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
PCOLCE-204ENST00000468214 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
PCOLCE-204ENST00000468214 ARHGEF1Q92888 912 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-204ENST00000468214 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-204ENST00000468214 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
PCOLCE-204ENST00000468214 GPR162Q16538 588 aa19.48■□□□□ 0.71
PCOLCE-204ENST00000468214 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
PCOLCE-204ENST00000468214 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
PCOLCE-204ENST00000468214 NLGN2Q8NFZ4 835 aa19.48■□□□□ 0.71
PCOLCE-204ENST00000468214 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
PCOLCE-204ENST00000468214 CEMIPQ8WUJ3 1361 aa19.47■□□□□ 0.71
PCOLCE-204ENST00000468214 CCDC87Q9NVE4 849 aa19.47■□□□□ 0.71
PCOLCE-204ENST00000468214 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
PCOLCE-204ENST00000468214 VSIG10Q8N0Z9 540 aa19.46■□□□□ 0.71
PCOLCE-204ENST00000468214 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 MMP10P09238 476 aa19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 YY1P25490 414 aa19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 INTS5Q6P9B9 1019 aaKnown RBP19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 MCM10Q7L590 875 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms