RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
C9orf3-212ENST00000468164 GPR162Q16538 588 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 DCAF5Q96JK2 942 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
C9orf3-212ENST00000468164 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
C9orf3-212ENST00000468164 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
C9orf3-212ENST00000468164 IL13P35225 146 aa18.22■□□□□ 0.51
C9orf3-212ENST00000468164 CABP4P57796 275 aa18.22■□□□□ 0.51
C9orf3-212ENST00000468164 KDM6AO15550 1401 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-212ENST00000468164 PLEKHG2Q9H7P9 1386 aa18.21■□□□□ 0.51
C9orf3-212ENST00000468164 HMOX1P09601 288 aa18.21■□□□□ 0.51
C9orf3-212ENST00000468164 ITPK1Q13572 414 aa18.21■□□□□ 0.51
C9orf3-212ENST00000468164 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
C9orf3-212ENST00000468164 NLGN2Q8NFZ4 835 aa18.21■□□□□ 0.51
C9orf3-212ENST00000468164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
C9orf3-212ENST00000468164 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
C9orf3-212ENST00000468164 GNPATO15228 680 aa18.2■□□□□ 0.5
C9orf3-212ENST00000468164 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-212ENST00000468164 MYH14Q7Z406 1995 aaKnown RBP18.2■□□□□ 0.5
C9orf3-212ENST00000468164 ZNF831Q5JPB2 1677 aa18.19■□□□□ 0.5
C9orf3-212ENST00000468164 KDRP35968 1356 aa18.18■□□□□ 0.5
C9orf3-212ENST00000468164 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
C9orf3-212ENST00000468164 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
C9orf3-212ENST00000468164 TJP1Q07157 1748 aa18.16■□□□□ 0.5
C9orf3-212ENST00000468164 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
C9orf3-212ENST00000468164 SSFA2P28290 1259 aa18.16■□□□□ 0.5
C9orf3-212ENST00000468164 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
C9orf3-212ENST00000468164 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
C9orf3-212ENST00000468164 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
C9orf3-212ENST00000468164 AKAP4Q5JQC9 854 aa18.13■□□□□ 0.49
C9orf3-212ENST00000468164 RTCBQ9Y3I0 505 aaKnown RBP18.13■□□□□ 0.49
C9orf3-212ENST00000468164 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-212ENST00000468164 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
C9orf3-212ENST00000468164 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
C9orf3-212ENST00000468164 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
C9orf3-212ENST00000468164 COL3A1P02461 1466 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-212ENST00000468164 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
C9orf3-212ENST00000468164 MTHFSDQ2M296 383 aaKnown RBP18.1■□□□□ 0.49
C9orf3-212ENST00000468164 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■■□□□ 11.8
C9orf3-212ENST00000468164 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
C9orf3-212ENST00000468164 CNTNAP4Q9C0A0 1308 aa18.08■□□□□ 0.49
C9orf3-212ENST00000468164 RFC4P35249 363 aa18.08■□□□□ 0.48
C9orf3-212ENST00000468164 ZNF784Q8NCA9 323 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-212ENST00000468164 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.48
C9orf3-212ENST00000468164 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.48
C9orf3-212ENST00000468164 CICQ96RK0 1608 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-212ENST00000468164 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
C9orf3-212ENST00000468164 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
C9orf3-212ENST00000468164 MMP10P09238 476 aa18.07■□□□□ 0.48
C9orf3-212ENST00000468164 SLC39A6Q13433 755 aa18.07■□□□□ 0.48
C9orf3-212ENST00000468164 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
C9orf3-212ENST00000468164 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-212ENST00000468164 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
C9orf3-212ENST00000468164 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
C9orf3-212ENST00000468164 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
C9orf3-212ENST00000468164 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
C9orf3-212ENST00000468164 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
C9orf3-212ENST00000468164 MRC1P22897 1456 aa18.06■□□□□ 0.48
C9orf3-212ENST00000468164 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
C9orf3-212ENST00000468164 ADRA2BP18089 450 aa18.04■□□□□ 0.48
C9orf3-212ENST00000468164 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
C9orf3-212ENST00000468164 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
C9orf3-212ENST00000468164 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
C9orf3-212ENST00000468164 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
C9orf3-212ENST00000468164 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
C9orf3-212ENST00000468164 AFDNP55196 1824 aaKnown RBP18.01■□□□□ 0.47
C9orf3-212ENST00000468164 GYS1P13807 737 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 TEFQ10587 303 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
C9orf3-212ENST00000468164 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
C9orf3-212ENST00000468164 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
C9orf3-212ENST00000468164 PRKAR2BP31323 418 aa18■□□□□ 0.47
C9orf3-212ENST00000468164 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
C9orf3-212ENST00000468164 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
C9orf3-212ENST00000468164 U2AF1L5P0DN76 240 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-212ENST00000468164 U2AF1Q01081 240 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■■□ 22.3
C9orf3-212ENST00000468164 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
C9orf3-212ENST00000468164 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
C9orf3-212ENST00000468164 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
C9orf3-212ENST00000468164 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
C9orf3-212ENST00000468164 FKBP8Q14318 412 aa17.97■□□□□ 0.47
C9orf3-212ENST00000468164 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
C9orf3-212ENST00000468164 RSPH6AQ9H0K4 717 aa17.97■□□□□ 0.47
C9orf3-212ENST00000468164 PXDNLA1KZ92 1463 aa17.96■□□□□ 0.47
C9orf3-212ENST00000468164 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
C9orf3-212ENST00000468164 ZPR1O75312 459 aa17.96■□□□□ 0.47
C9orf3-212ENST00000468164 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-212ENST00000468164 ZBTB1Q9Y2K1 713 aa17.96■□□□□ 0.47
C9orf3-212ENST00000468164 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
C9orf3-212ENST00000468164 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
C9orf3-212ENST00000468164 CANXP27824 592 aaKnown RBP17.95■□□□□ 0.46
C9orf3-212ENST00000468164 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
C9orf3-212ENST00000468164 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-212ENST00000468164 COL15A1P39059 1388 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms