RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 CENPCQ03188 943 aa9.46□□□□□ -0.9
RBM39-226ENST00000468086 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
RBM39-226ENST00000468086 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
RBM39-226ENST00000468086 PCDHGA11Q9Y5H2 935 aa9.46□□□□□ -0.9
RBM39-226ENST00000468086 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
RBM39-226ENST00000468086 INHAP05111 366 aa9.45□□□□□ -0.9
RBM39-226ENST00000468086 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
RBM39-226ENST00000468086 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
RBM39-226ENST00000468086 RAB6BQ9NRW1 208 aa9.45□□□□□ -0.9
RBM39-226ENST00000468086 USP17L3A6NCW0 530 aa9.44□□□□□ -0.9
RBM39-226ENST00000468086 USP17L4A6NCW7 530 aa9.44□□□□□ -0.9
RBM39-226ENST00000468086 RHOQP17081 205 aa9.44□□□□□ -0.9
RBM39-226ENST00000468086 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
RBM39-226ENST00000468086 USP17L1Q7RTZ2 530 aa9.44□□□□□ -0.9
RBM39-226ENST00000468086 CUEDC1Q9NWM3 386 aaPredicted RBP9.44□□□□□ -0.9
RBM39-226ENST00000468086 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
RBM39-226ENST00000468086 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
RBM39-226ENST00000468086 GTF2E1P29083 439 aaPredicted RBP9.43□□□□□ -0.9
RBM39-226ENST00000468086 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
RBM39-226ENST00000468086 SCNN1DP51172 638 aa9.43□□□□□ -0.9
RBM39-226ENST00000468086 GDF10P55107 478 aa9.43□□□□□ -0.9
RBM39-226ENST00000468086 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
RBM39-226ENST00000468086 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
RBM39-226ENST00000468086 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
RBM39-226ENST00000468086 GTF2IP78347 998 aa9.42□□□□□ -0.9
RBM39-226ENST00000468086 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
RBM39-226ENST00000468086 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
RBM39-226ENST00000468086 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
RBM39-226ENST00000468086 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
RBM39-226ENST00000468086 BACH1O14867 736 aa9.41□□□□□ -0.9
RBM39-226ENST00000468086 MARSP56192 900 aaKnown RBP9.41□□□□□ -0.9
RBM39-226ENST00000468086 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
RBM39-226ENST00000468086 NBPF10Q6P3W6 841 aaKnown RBP9.41□□□□□ -0.9
RBM39-226ENST00000468086 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
RBM39-226ENST00000468086 NBPF15Q8N660 670 aa9.41□□□□□ -0.9
RBM39-226ENST00000468086 DYRK1BQ9Y463 629 aa9.41□□□□□ -0.9
RBM39-226ENST00000468086 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
RBM39-226ENST00000468086 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
RBM39-226ENST00000468086 POU4F2Q12837 409 aa9.4□□□□□ -0.9
RBM39-226ENST00000468086 GAS6Q14393 721 aa9.4□□□□□ -0.9
RBM39-226ENST00000468086 GNASQ5JWF2 1037 aa9.4□□□□□ -0.9
RBM39-226ENST00000468086 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
RBM39-226ENST00000468086 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
RBM39-226ENST00000468086 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 IRS1P35568 1242 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 SMTNP53814 917 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 PSME1Q06323 249 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 TLR1Q15399 786 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
RBM39-226ENST00000468086 LARGE2Q8N3Y3 721 aa9.39□□□□□ -0.91
RBM39-226ENST00000468086 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
RBM39-226ENST00000468086 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
RBM39-226ENST00000468086 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
RBM39-226ENST00000468086 FOXR1Q6PIV2 292 aa9.38□□□□□ -0.91
RBM39-226ENST00000468086 LYPD4Q6UWN0 246 aa9.38□□□□□ -0.91
RBM39-226ENST00000468086 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
RBM39-226ENST00000468086 SCARF2Q96GP6 870 aaPredicted RBP9.38□□□□□ -0.91
RBM39-226ENST00000468086 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
RBM39-226ENST00000468086 MTFR1Q15390 333 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 RHBDD1Q8TEB9 315 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 TIMMDC1Q9NPL8 285 aa9.37□□□□□ -0.91
RBM39-226ENST00000468086 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
RBM39-226ENST00000468086 LOC100996750A0A140TA64 210 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 A6NJY4 79 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 CLDN10P78369 228 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
RBM39-226ENST00000468086 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 KRTAP4-6Q9BYQ5 205 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
RBM39-226ENST00000468086 H7C1W4 665 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 GPR25O00155 361 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 F11P03951 625 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 CELA2BP08218 269 aaPredicted RBP9.35□□□□□ -0.91
RBM39-226ENST00000468086 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 SIX5Q8N196 739 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 ENAMQ9NRM1 1142 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 ZNF358Q9NW07 568 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 SERTAD1Q9UHV2 236 aa9.35□□□□□ -0.91
RBM39-226ENST00000468086 DNMT3AQ9Y6K1 912 aaPredicted RBP9.35□□□□□ -0.91
RBM39-226ENST00000468086 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
RBM39-226ENST00000468086 M0R2N6 131 aa9.34□□□□□ -0.91
RBM39-226ENST00000468086 DBN1Q16643 649 aa9.34□□□□□ -0.91
RBM39-226ENST00000468086 C4orf17Q53FE4 359 aa9.34□□□□□ -0.91
RBM39-226ENST00000468086 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
RBM39-226ENST00000468086 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
RBM39-226ENST00000468086 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
RBM39-226ENST00000468086 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
RBM39-226ENST00000468086 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
RBM39-226ENST00000468086 RASA1P20936 1047 aa9.33□□□□□ -0.92
RBM39-226ENST00000468086 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
RBM39-226ENST00000468086 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
RBM39-226ENST00000468086 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
RBM39-226ENST00000468086 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
RBM39-226ENST00000468086 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
RBM39-226ENST00000468086 GTPBP3Q969Y2 492 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms