RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
U2AF1-207ENST00000468039 ADH1CP00326 375 aa8.11□□□□□ -1.11
U2AF1-207ENST00000468039 SEMA3FQ13275 785 aa8.11□□□□□ -1.11
U2AF1-207ENST00000468039 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
U2AF1-207ENST00000468039 ADCY10Q96PN6 1610 aa8.11□□□□□ -1.11
U2AF1-207ENST00000468039 NR5A1Q13285 461 aa8.1□□□□□ -1.11
U2AF1-207ENST00000468039 ZNF385CQ66K41 422 aaPredicted RBP8.1□□□□□ -1.11
U2AF1-207ENST00000468039 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
U2AF1-207ENST00000468039 KCTD15Q96SI1 283 aaPredicted RBP8.1□□□□□ -1.11
U2AF1-207ENST00000468039 FSHRP23945 695 aa8.09□□□□□ -1.11
U2AF1-207ENST00000468039 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
U2AF1-207ENST00000468039 SAMD9Q5K651 1589 aa8.09□□□□□ -1.11
U2AF1-207ENST00000468039 PLB1Q6P1J6 1458 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
U2AF1-207ENST00000468039 NNTQ13423 1086 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 SCARF1Q14162 830 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 GALNT6Q8NCL4 622 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 FHOD3Q2V2M9 1422 aa8.08□□□□□ -1.12
U2AF1-207ENST00000468039 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
U2AF1-207ENST00000468039 KRT76Q01546 638 aa8.07□□□□□ -1.12
U2AF1-207ENST00000468039 CCDC125Q86Z20 511 aa8.07□□□□□ -1.12
U2AF1-207ENST00000468039 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 PPFIA3O75145 1194 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 RAB15P59190 212 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-207ENST00000468039 ABCC2Q92887 1545 aa8.06□□□□□ -1.12
U2AF1-207ENST00000468039 TRAK2O60296 914 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 ARHGEF15O94989 841 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 GRM5P41594 1212 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 SLFNL1Q499Z3 407 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 UHRF1BP1LA0JNW5 1464 aa8.05□□□□□ -1.12
U2AF1-207ENST00000468039 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-207ENST00000468039 INTS6LQ5JSJ4 861 aaKnown RBP8.04□□□□□ -1.12
U2AF1-207ENST00000468039 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
U2AF1-207ENST00000468039 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
U2AF1-207ENST00000468039 EMILIN1Q9Y6C2 1016 aa8.04□□□□□ -1.12
U2AF1-207ENST00000468039 ARHGAP35Q9NRY4 1499 aa8.04□□□□□ -1.12
U2AF1-207ENST00000468039 ABCA8O94911 1581 aa8.04□□□□□ -1.12
U2AF1-207ENST00000468039 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
U2AF1-207ENST00000468039 LOC105371045A0A1W2PR82 267 aa8.03□□□□□ -1.12
U2AF1-207ENST00000468039 POM121CA8CG34 1229 aa8.03□□□□□ -1.12
U2AF1-207ENST00000468039 PROCP04070 461 aa8.03□□□□□ -1.12
U2AF1-207ENST00000468039 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
U2AF1-207ENST00000468039 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
U2AF1-207ENST00000468039 SOBPA7XYQ1 873 aa8.02□□□□□ -1.13
U2AF1-207ENST00000468039 ESPNB1AK53 854 aa8.02□□□□□ -1.13
U2AF1-207ENST00000468039 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
U2AF1-207ENST00000468039 RNF135Q8IUD6 432 aa8.02□□□□□ -1.13
U2AF1-207ENST00000468039 CALR3Q96L12 384 aaKnown RBP8.02□□□□□ -1.13
U2AF1-207ENST00000468039 ZCCHC11Q5TAX3 1644 aaKnown RBP8.02□□□□□ -1.13
U2AF1-207ENST00000468039 MAPKBP1O60336 1514 aa8.02□□□□□ -1.13
U2AF1-207ENST00000468039 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
U2AF1-207ENST00000468039 NR3C2P08235 984 aa8.01□□□□□ -1.13
U2AF1-207ENST00000468039 PPP1R26Q5T8A7 1209 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-207ENST00000468039 GLMNQ92990 594 aa8.01□□□□□ -1.13
U2AF1-207ENST00000468039 ALG2Q9H553 416 aa8.01□□□□□ -1.13
U2AF1-207ENST00000468039 ZNF777Q9ULD5 760 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-207ENST00000468039 ASXL2Q76L83 1435 aa8.01□□□□□ -1.13
U2AF1-207ENST00000468039 RAPGEF6Q8TEU7 1601 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 MAN1A2O60476 641 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 ZIC2O95409 532 aaPredicted RBP8□□□□□ -1.13
U2AF1-207ENST00000468039 FAM69CQ0P6D2 419 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
U2AF1-207ENST00000468039 CLIP1P30622 1438 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 DIP2BQ9P265 1576 aa8□□□□□ -1.13
U2AF1-207ENST00000468039 NUP153P49790 1475 aaKnown RBP8□□□□□ -1.13
U2AF1-207ENST00000468039 SLURP2P0DP57 97 aa7.99□□□□□ -1.13
U2AF1-207ENST00000468039 PCDHB11Q9Y5F2 797 aa7.99□□□□□ -1.13
U2AF1-207ENST00000468039 ATP10BO94823 1461 aa7.99□□□□□ -1.13
U2AF1-207ENST00000468039 ABCC10Q5T3U5 1492 aa7.99□□□□□ -1.13
U2AF1-207ENST00000468039 KIF13AQ9H1H9 1805 aa7.99□□□□□ -1.13
U2AF1-207ENST00000468039 TIMP2P16035 220 aa7.98□□□□□ -1.13
U2AF1-207ENST00000468039 DCAF5Q96JK2 942 aa7.98□□□□□ -1.13
U2AF1-207ENST00000468039 DOLKQ9UPQ8 538 aa7.98□□□□□ -1.13
U2AF1-207ENST00000468039 CEP162Q5TB80 1403 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 MYCP01106 439 aaPredicted RBP7.97□□□□□ -1.13
U2AF1-207ENST00000468039 SKIP12755 728 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 ITPKCQ96DU7 683 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 COL25A1Q9BXS0 654 aaPredicted RBP7.97□□□□□ -1.13
U2AF1-207ENST00000468039 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 WDR7Q9Y4E6 1490 aa7.97□□□□□ -1.13
U2AF1-207ENST00000468039 FMN1Q68DA7 1419 aa7.96□□□□□ -1.13
U2AF1-207ENST00000468039 UPP2O95045 317 aa7.96□□□□□ -1.14
U2AF1-207ENST00000468039 ITGB2P05107 769 aa7.96□□□□□ -1.14
U2AF1-207ENST00000468039 GPR161Q8N6U8 529 aaKnown RBP7.96□□□□□ -1.14
U2AF1-207ENST00000468039 ZNF784Q8NCA9 323 aaPredicted RBP7.96□□□□□ -1.14
U2AF1-207ENST00000468039 NFATC2IPQ8NCF5 419 aa7.96□□□□□ -1.14
U2AF1-207ENST00000468039 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
U2AF1-207ENST00000468039 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
U2AF1-207ENST00000468039 EPRSP07814 1512 aaKnown RBP7.96□□□□□ -1.14
U2AF1-207ENST00000468039 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms