RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
CTNS-205ENST00000467663 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
CTNS-205ENST00000467663 POLD1P28340 1107 aa16.09■□□□□ 0.17
CTNS-205ENST00000467663 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
CTNS-205ENST00000467663 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.17
CTNS-205ENST00000467663 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
CTNS-205ENST00000467663 CABP4P57796 275 aa16.08■□□□□ 0.16
CTNS-205ENST00000467663 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
CTNS-205ENST00000467663 MSH5O43196 834 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 HMOX1P09601 288 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 ATP6V1AP38606 617 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 ITPK1Q13572 414 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 LINC00116Q8NCU8 138 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 AK7Q96M32 723 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
CTNS-205ENST00000467663 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
CTNS-205ENST00000467663 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
CTNS-205ENST00000467663 AMIGO3Q86WK7 504 aa16.06■□□□□ 0.16
CTNS-205ENST00000467663 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
CTNS-205ENST00000467663 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
CTNS-205ENST00000467663 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
CTNS-205ENST00000467663 SSFA2P28290 1259 aa16.04■□□□□ 0.16
CTNS-205ENST00000467663 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
CTNS-205ENST00000467663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.03■□□□□ 0.16
CTNS-205ENST00000467663 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
CTNS-205ENST00000467663 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
CTNS-205ENST00000467663 MSL1Q68DK7 614 aa16.02■□□□□ 0.16
CTNS-205ENST00000467663 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
CTNS-205ENST00000467663 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
CTNS-205ENST00000467663 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
CTNS-205ENST00000467663 GNPATO15228 680 aa16.01■□□□□ 0.15
CTNS-205ENST00000467663 PHF14O94880 888 aa16.01■□□□□ 0.15
CTNS-205ENST00000467663 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
CTNS-205ENST00000467663 LGR6Q9HBX8 967 aa16.01■□□□□ 0.15
CTNS-205ENST00000467663 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
CTNS-205ENST00000467663 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
CTNS-205ENST00000467663 CFAP53Q96M91 514 aa16■□□□□ 0.15
CTNS-205ENST00000467663 SLC52A2Q9HAB3 445 aa16■□□□□ 0.15
CTNS-205ENST00000467663 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
CTNS-205ENST00000467663 YY1P25490 414 aa15.99■□□□□ 0.15
CTNS-205ENST00000467663 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
CTNS-205ENST00000467663 SCN11AQ9UI33 1791 aa15.99■□□□□ 0.15
CTNS-205ENST00000467663 MRC1P22897 1456 aa15.98■□□□□ 0.15
CTNS-205ENST00000467663 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
CTNS-205ENST00000467663 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
CTNS-205ENST00000467663 RTCBQ9Y3I0 505 aaKnown RBP15.98■□□□□ 0.15
CTNS-205ENST00000467663 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
CTNS-205ENST00000467663 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
CTNS-205ENST00000467663 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
CTNS-205ENST00000467663 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
CTNS-205ENST00000467663 ADRA2BP18089 450 aa15.96■□□□□ 0.15
CTNS-205ENST00000467663 NUDCQ9Y266 331 aa15.96■□□□□ 0.15
CTNS-205ENST00000467663 CD2APQ9Y5K6 639 aa15.96■□□□□ 0.15
CTNS-205ENST00000467663 COL5A3P25940 1745 aaPredicted RBP15.95■□□□□ 0.14
CTNS-205ENST00000467663 CCDC184Q52MB2 194 aa15.95■□□□□ 0.14
CTNS-205ENST00000467663 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
CTNS-205ENST00000467663 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
CTNS-205ENST00000467663 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
CTNS-205ENST00000467663 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
CTNS-205ENST00000467663 CRKLP46109 303 aaKnown RBP15.94■□□□□ 0.14
CTNS-205ENST00000467663 GPR162Q16538 588 aa15.94■□□□□ 0.14
CTNS-205ENST00000467663 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
CTNS-205ENST00000467663 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
CTNS-205ENST00000467663 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
CTNS-205ENST00000467663 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
CTNS-205ENST00000467663 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
CTNS-205ENST00000467663 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
CTNS-205ENST00000467663 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
CTNS-205ENST00000467663 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
CTNS-205ENST00000467663 NLGN1Q8N2Q7 840 aa15.92■□□□□ 0.14
CTNS-205ENST00000467663 TJP1Q07157 1748 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 KCPQ6ZWJ8 1503 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 FCHSD2O94868 740 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
CTNS-205ENST00000467663 GYS1P13807 737 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 RFC4P35249 363 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTNS-205ENST00000467663 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
CTNS-205ENST00000467663 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
CTNS-205ENST00000467663 MMP10P09238 476 aa15.9■□□□□ 0.14
CTNS-205ENST00000467663 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
CTNS-205ENST00000467663 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
CTNS-205ENST00000467663 TEFQ10587 303 aa15.89■□□□□ 0.13
CTNS-205ENST00000467663 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
CTNS-205ENST00000467663 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
CTNS-205ENST00000467663 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
CTNS-205ENST00000467663 GRIN3BO60391 1043 aa15.88■□□□□ 0.13
CTNS-205ENST00000467663 YBX3P16989 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTNS-205ENST00000467663 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
CTNS-205ENST00000467663 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
CTNS-205ENST00000467663 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
CTNS-205ENST00000467663 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
CTNS-205ENST00000467663 USP42Q9H9J4 1324 aaKnown RBP15.87■□□□□ 0.13
CTNS-205ENST00000467663 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
CTNS-205ENST00000467663 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
CTNS-205ENST00000467663 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
CTNS-205ENST00000467663 SRP68Q9UHB9 627 aaKnown RBP15.85■□□□□ 0.13
CTNS-205ENST00000467663 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms