RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-204ENST00000467560 MTHFSP49914 203 aa20.14■□□□□ 0.81
ATPAF2-204ENST00000467560 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-204ENST00000467560 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
ATPAF2-204ENST00000467560 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
ATPAF2-204ENST00000467560 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
ATPAF2-204ENST00000467560 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
ATPAF2-204ENST00000467560 AMOTQ4VCS5 1084 aa20.12■□□□□ 0.81
ATPAF2-204ENST00000467560 FLAD1Q8NFF5 587 aa20.12■□□□□ 0.81
ATPAF2-204ENST00000467560 GPR162Q16538 588 aa20.11■□□□□ 0.81
ATPAF2-204ENST00000467560 GNPATO15228 680 aa20.1■□□□□ 0.81
ATPAF2-204ENST00000467560 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
ATPAF2-204ENST00000467560 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
ATPAF2-204ENST00000467560 SSFA2P28290 1259 aa20.09■□□□□ 0.81
ATPAF2-204ENST00000467560 CABP4P57796 275 aa20.09■□□□□ 0.81
ATPAF2-204ENST00000467560 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
ATPAF2-204ENST00000467560 RBM42Q9BTD8 480 aaKnown RBP20.09■□□□□ 0.81
ATPAF2-204ENST00000467560 HMOX1P09601 288 aa20.08■□□□□ 0.81
ATPAF2-204ENST00000467560 YBX3P16989 372 aaKnown RBP eCLIP20.08■□□□□ 0.81
ATPAF2-204ENST00000467560 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
ATPAF2-204ENST00000467560 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
ATPAF2-204ENST00000467560 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
ATPAF2-204ENST00000467560 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
ATPAF2-204ENST00000467560 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
ATPAF2-204ENST00000467560 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
ATPAF2-204ENST00000467560 PTCD1O75127 700 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-204ENST00000467560 CD2APQ9Y5K6 639 aa20.04■□□□□ 0.8
ATPAF2-204ENST00000467560 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
ATPAF2-204ENST00000467560 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
ATPAF2-204ENST00000467560 NPC1L1Q9UHC9 1359 aa20.03■□□□□ 0.8
ATPAF2-204ENST00000467560 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.8
ATPAF2-204ENST00000467560 MTHFSDQ2M296 383 aaKnown RBP20.02■□□□□ 0.8
ATPAF2-204ENST00000467560 ZNF831Q5JPB2 1677 aa20.02■□□□□ 0.8
ATPAF2-204ENST00000467560 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
ATPAF2-204ENST00000467560 CHD4Q14839 1912 aa20.01■□□□□ 0.79
ATPAF2-204ENST00000467560 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
ATPAF2-204ENST00000467560 TRAPPC3LQ5T215 181 aa20■□□□□ 0.79
ATPAF2-204ENST00000467560 RC3H1Q5TC82 1133 aaKnown RBP20■□□□□ 0.79
ATPAF2-204ENST00000467560 RTCBQ9Y3I0 505 aaKnown RBP20■□□□□ 0.79
ATPAF2-204ENST00000467560 MYH14Q7Z406 1995 aaKnown RBP20■□□□□ 0.79
ATPAF2-204ENST00000467560 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
ATPAF2-204ENST00000467560 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
ATPAF2-204ENST00000467560 WWC3Q9ULE0 1092 aa19.99■□□□□ 0.79
ATPAF2-204ENST00000467560 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
ATPAF2-204ENST00000467560 RPS6KA4O75676 772 aa19.98■□□□□ 0.79
ATPAF2-204ENST00000467560 MMP10P09238 476 aa19.98■□□□□ 0.79
ATPAF2-204ENST00000467560 TJP1Q07157 1748 aa19.97■□□□□ 0.79
ATPAF2-204ENST00000467560 SLC39A6Q13433 755 aa19.97■□□□□ 0.79
ATPAF2-204ENST00000467560 MRC1P22897 1456 aa19.97■□□□□ 0.79
ATPAF2-204ENST00000467560 GYS1P13807 737 aa19.96■□□□□ 0.79
ATPAF2-204ENST00000467560 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
ATPAF2-204ENST00000467560 U2SURPO15042 1029 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-204ENST00000467560 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
ATPAF2-204ENST00000467560 ADRA2BP18089 450 aa19.95■□□□□ 0.78
ATPAF2-204ENST00000467560 INTS5Q6P9B9 1019 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-204ENST00000467560 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
ATPAF2-204ENST00000467560 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
ATPAF2-204ENST00000467560 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
ATPAF2-204ENST00000467560 KCPQ6ZWJ8 1503 aa19.93■□□□□ 0.78
ATPAF2-204ENST00000467560 RFC4P35249 363 aa19.93■□□□□ 0.78
ATPAF2-204ENST00000467560 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
ATPAF2-204ENST00000467560 C4AP0C0L4 1744 aa19.93■□□□□ 0.78
ATPAF2-204ENST00000467560 NLGN1Q8N2Q7 840 aa19.92■□□□□ 0.78
ATPAF2-204ENST00000467560 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
ATPAF2-204ENST00000467560 PHACTR3Q96KR7 559 aa19.91■□□□□ 0.78
ATPAF2-204ENST00000467560 PPP2R1AP30153 589 aa19.9■□□□□ 0.78
ATPAF2-204ENST00000467560 FKBP8Q14318 412 aa19.9■□□□□ 0.78
ATPAF2-204ENST00000467560 PXDNLA1KZ92 1463 aa19.9■□□□□ 0.78
ATPAF2-204ENST00000467560 KIAA1551Q9HCM1 1747 aa19.9■□□□□ 0.78
ATPAF2-204ENST00000467560 CYP19A1P11511 503 aaPredicted RBP19.89■□□□□ 0.77
ATPAF2-204ENST00000467560 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
ATPAF2-204ENST00000467560 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
ATPAF2-204ENST00000467560 USP42Q9H9J4 1324 aaKnown RBP19.89■□□□□ 0.77
ATPAF2-204ENST00000467560 DDR1Q08345 913 aa19.88■□□□□ 0.77
ATPAF2-204ENST00000467560 CCDC87Q9NVE4 849 aa19.88■□□□□ 0.77
ATPAF2-204ENST00000467560 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
ATPAF2-204ENST00000467560 A0A0G2JLW4 131 aa19.87■□□□□ 0.77
ATPAF2-204ENST00000467560 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
ATPAF2-204ENST00000467560 KIF13BQ9NQT8 1826 aa19.87■□□□□ 0.77
ATPAF2-204ENST00000467560 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
ATPAF2-204ENST00000467560 ZBTB1Q9Y2K1 713 aa19.86■□□□□ 0.77
ATPAF2-204ENST00000467560 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
ATPAF2-204ENST00000467560 DPEP1P16444 411 aa19.85■□□□□ 0.77
ATPAF2-204ENST00000467560 GAS2L2Q8NHY3 880 aa19.85■□□□□ 0.77
ATPAF2-204ENST00000467560 PARP3Q9Y6F1 533 aa19.85■□□□□ 0.77
ATPAF2-204ENST00000467560 N4BP2Q86UW6 1770 aaPredicted RBP19.85■□□□□ 0.77
ATPAF2-204ENST00000467560 USPL1Q5W0Q7 1092 aa19.84■□□□□ 0.77
ATPAF2-204ENST00000467560 UBR2Q8IWV8 1755 aa19.84■□□□□ 0.77
ATPAF2-204ENST00000467560 ATP10DQ9P241 1426 aa19.84■□□□□ 0.77
ATPAF2-204ENST00000467560 TGFB2P61812 414 aa19.83■□□□□ 0.77
ATPAF2-204ENST00000467560 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
ATPAF2-204ENST00000467560 ZNF496Q96IT1 587 aaPredicted RBP19.83■□□□□ 0.77
ATPAF2-204ENST00000467560 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
ATPAF2-204ENST00000467560 ADCY9O60503 1353 aa19.83■□□□□ 0.76
ATPAF2-204ENST00000467560 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.76
ATPAF2-204ENST00000467560 KCNQ3O43525 872 aa19.82■□□□□ 0.76
ATPAF2-204ENST00000467560 KCNA3P22001 575 aa19.82■□□□□ 0.76
ATPAF2-204ENST00000467560 TM4SF1P30408 202 aa19.82■□□□□ 0.76
ATPAF2-204ENST00000467560 C1QTNF8P60827 252 aa19.82■□□□□ 0.76
ATPAF2-204ENST00000467560 BCL2L12Q9HB09 334 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms