RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 PTPRCP08575 1304 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 JCADQ9P266 1359 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 RLBP1P12271 317 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
PRPF3-202ENST00000467329 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
PRPF3-202ENST00000467329 ABCC4O15439 1325 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
PRPF3-202ENST00000467329 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
PRPF3-202ENST00000467329 HEG1Q9ULI3 1381 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 EIF4A1P60842 406 aaKnown RBP12.04□□□□□ -0.48
PRPF3-202ENST00000467329 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
PRPF3-202ENST00000467329 CLUAP1Q96AJ1 413 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
PRPF3-202ENST00000467329 CYP27B1O15528 508 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 CCDC30Q5VVM6 783 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
PRPF3-202ENST00000467329 SLIT2O94813 1529 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 CENPQQ7L2Z9 268 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-202ENST00000467329 STRN4Q9NRL3 753 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 LRP6O75581 1613 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 TNNQ9UQP3 1299 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
PRPF3-202ENST00000467329 N4BP2Q86UW6 1770 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-202ENST00000467329 RGS12O14924 1447 aa12.02□□□□□ -0.48
PRPF3-202ENST00000467329 CDCA7Q9BWT1 371 aaPredicted RBP12.02□□□□□ -0.48
PRPF3-202ENST00000467329 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
PRPF3-202ENST00000467329 PAPPAQ13219 1627 aa12.02□□□□□ -0.49
PRPF3-202ENST00000467329 TMEM57Q8N5G2 664 aa12.01□□□□□ -0.49
PRPF3-202ENST00000467329 THRAP3Q9Y2W1 955 aaKnown RBP12.01□□□□□ -0.49
PRPF3-202ENST00000467329 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
PRPF3-202ENST00000467329 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
PRPF3-202ENST00000467329 PXDNLA1KZ92 1463 aa12.01□□□□□ -0.49
PRPF3-202ENST00000467329 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
PRPF3-202ENST00000467329 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
PRPF3-202ENST00000467329 TNS2Q63HR2 1409 aa12□□□□□ -0.49
PRPF3-202ENST00000467329 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.99□□□□□ -0.49
PRPF3-202ENST00000467329 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
PRPF3-202ENST00000467329 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
PRPF3-202ENST00000467329 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 CABP4P57796 275 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 ZNF790Q6PG37 636 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 ZBTB40Q9NUA8 1239 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 GLI3P10071 1580 aa11.98□□□□□ -0.49
PRPF3-202ENST00000467329 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
PRPF3-202ENST00000467329 KCNQ3O43525 872 aa11.97□□□□□ -0.49
PRPF3-202ENST00000467329 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
PRPF3-202ENST00000467329 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
PRPF3-202ENST00000467329 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
PRPF3-202ENST00000467329 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
PRPF3-202ENST00000467329 C5P01031 1676 aa11.96□□□□□ -0.49
PRPF3-202ENST00000467329 BARGINQ6ZT62 677 aa11.96□□□□□ -0.49
PRPF3-202ENST00000467329 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.5
PRPF3-202ENST00000467329 FLIIQ13045 1269 aa11.96□□□□□ -0.5
PRPF3-202ENST00000467329 HDAC1Q13547 482 aaPredicted RBP11.96□□□□□ -0.5
PRPF3-202ENST00000467329 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.5
PRPF3-202ENST00000467329 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.5
PRPF3-202ENST00000467329 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-202ENST00000467329 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-202ENST00000467329 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-202ENST00000467329 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-202ENST00000467329 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
PRPF3-202ENST00000467329 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
PRPF3-202ENST00000467329 DBF4Q9UBU7 674 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-202ENST00000467329 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
PRPF3-202ENST00000467329 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
PRPF3-202ENST00000467329 G2E3Q7L622 706 aa11.94□□□□□ -0.5
PRPF3-202ENST00000467329 UNC5CLQ8IV45 518 aa11.94□□□□□ -0.5
PRPF3-202ENST00000467329 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
PRPF3-202ENST00000467329 FNBP4Q8N3X1 1017 aaPredicted RBP11.94□□□□□ -0.5
PRPF3-202ENST00000467329 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
PRPF3-202ENST00000467329 SNRPA1P09661 255 aaKnown RBP11.93□□□□□ -0.5
PRPF3-202ENST00000467329 VPS72Q15906 364 aa11.93□□□□□ -0.5
PRPF3-202ENST00000467329 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
PRPF3-202ENST00000467329 EXOC5O00471 708 aa11.93□□□□□ -0.5
PRPF3-202ENST00000467329 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
PRPF3-202ENST00000467329 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
PRPF3-202ENST00000467329 ATP10DQ9P241 1426 aa11.93□□□□□ -0.5
PRPF3-202ENST00000467329 DDX21Q9NR30 783 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRPF3-202ENST00000467329 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
PRPF3-202ENST00000467329 IGHDP01880 384 aa11.92□□□□□ -0.5
PRPF3-202ENST00000467329 ZNF496Q96IT1 587 aaPredicted RBP11.92□□□□□ -0.5
PRPF3-202ENST00000467329 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
PRPF3-202ENST00000467329 ITGB4P16144 1822 aa11.92□□□□□ -0.5
PRPF3-202ENST00000467329 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
PRPF3-202ENST00000467329 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
PRPF3-202ENST00000467329 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-202ENST00000467329 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
PRPF3-202ENST00000467329 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
PRPF3-202ENST00000467329 BCL9O00512 1426 aa11.9□□□□□ -0.5
PRPF3-202ENST00000467329 THSD7AQ9UPZ6 1657 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms