RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 FAM161BQ96MY7 647 aa6.58□□□□□ -1.36
MSH2-205ENST00000467323 PCDH10Q9P2E7 1040 aa6.58□□□□□ -1.36
MSH2-205ENST00000467323 TLDC2A0PJX2 215 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 BHMG1C9JSJ3 638 aaPredicted RBP6.57□□□□□ -1.36
MSH2-205ENST00000467323 BACH1O14867 736 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 AGERQ15109 404 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 ERFEQ4G0M1 354 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 MAMSTRQ6ZN01 415 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 DHX38Q92620 1227 aaKnown RBP6.57□□□□□ -1.36
MSH2-205ENST00000467323 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
MSH2-205ENST00000467323 GMLQ99445 158 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 SPSB2Q99619 263 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 ESF1Q9H501 851 aaKnown RBP6.57□□□□□ -1.36
MSH2-205ENST00000467323 ZNF358Q9NW07 568 aa6.57□□□□□ -1.36
MSH2-205ENST00000467323 ESPNB1AK53 854 aa6.56□□□□□ -1.36
MSH2-205ENST00000467323 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
MSH2-205ENST00000467323 FAM160A2Q8N612 972 aaPredicted RBP6.56□□□□□ -1.36
MSH2-205ENST00000467323 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
MSH2-205ENST00000467323 POLR3GLQ9BT43 218 aa6.56□□□□□ -1.36
MSH2-205ENST00000467323 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.56□□□□□ -1.36
MSH2-205ENST00000467323 TTBK1Q5TCY1 1321 aaPredicted RBP6.55□□□□□ -1.36
MSH2-205ENST00000467323 EIF1AXP47813 144 aaKnown RBP6.55□□□□□ -1.36
MSH2-205ENST00000467323 APLP1P51693 650 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 CCDC144BQ3MJ40 725 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 TRIM52Q96A61 297 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 FAM129BQ96TA1 746 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 ACBD3Q9H3P7 528 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 ATAD2Q6PL18 1390 aa6.55□□□□□ -1.36
MSH2-205ENST00000467323 DNAJA1P31689 397 aaKnown RBP6.54□□□□□ -1.36
MSH2-205ENST00000467323 ARID5AQ03989 594 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 CCDC24Q8N4L8 307 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 ABTB2Q8N961 1025 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 ANKK1Q8NFD2 765 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 CWC22Q9HCG8 908 aaKnown RBP6.54□□□□□ -1.36
MSH2-205ENST00000467323 STIM2Q9P246 746 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
MSH2-205ENST00000467323 AXIN2Q9Y2T1 843 aa6.54□□□□□ -1.36
MSH2-205ENST00000467323 TK2O00142 265 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 FZD6O60353 706 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 RBL2Q08999 1139 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 POTEEQ6S8J3 1075 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 CYLDQ9NQC7 956 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 CCDC87Q9NVE4 849 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 HPS5Q9UPZ3 1129 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
MSH2-205ENST00000467323 ERBB3P21860 1342 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 TMEM229AB2RXF0 380 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 WASLO00401 505 aaPredicted RBP6.52□□□□□ -1.37
MSH2-205ENST00000467323 GPR182O15218 404 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 GNA15P30679 374 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 USP5P45974 858 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 ENOX2Q16206 610 aaKnown RBP6.52□□□□□ -1.37
MSH2-205ENST00000467323 SDE2Q6IQ49 451 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 PTCRAQ6ISU1 281 aaPredicted RBP6.52□□□□□ -1.37
MSH2-205ENST00000467323 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 ZNF654Q8IZM8 581 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 PMFBP1Q8TBY8 1022 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 CHMP7Q8WUX9 453 aaPredicted RBP6.52□□□□□ -1.37
MSH2-205ENST00000467323 CRELD1Q96HD1 420 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 PRDM9Q9NQV7 894 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 TSR3Q9UJK0 312 aaKnown RBP6.52□□□□□ -1.37
MSH2-205ENST00000467323 WWC3Q9ULE0 1092 aa6.52□□□□□ -1.37
MSH2-205ENST00000467323 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 GOLGA8CPA6NN73 597 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 IGHA2P01877 340 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 TNNI2P48788 182 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 VARS2Q5ST30 1063 aaKnown RBP6.51□□□□□ -1.37
MSH2-205ENST00000467323 TRMT44Q8IYL2 757 aaKnown RBP6.51□□□□□ -1.37
MSH2-205ENST00000467323 TNS4Q8IZW8 715 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 STAG2Q8N3U4 1231 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 FBF1Q8TES7 1133 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 BAP1Q92560 729 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 SAP130Q9H0E3 1048 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 ZSWIM4Q9H7M6 989 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 EMILIN1Q9Y6C2 1016 aa6.51□□□□□ -1.37
MSH2-205ENST00000467323 SBNO2Q9Y2G9 1366 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 PNMA6FA0A0J9YX94 578 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 PPP1R12BO60237 982 aaPredicted RBP6.5□□□□□ -1.37
MSH2-205ENST00000467323 GDF10P55107 478 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 ZNF511Q8NB15 262 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 C1QTNF2Q9BXJ5 285 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 NIF3L1Q9GZT8 377 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 TSPAN10Q9H1Z9 355 aaPredicted RBP6.5□□□□□ -1.37
MSH2-205ENST00000467323 RNF19AQ9NV58 838 aa6.5□□□□□ -1.37
MSH2-205ENST00000467323 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.5□□□□□ -1.37
MSH2-205ENST00000467323 STK10O94804 968 aaKnown RBP6.49□□□□□ -1.37
MSH2-205ENST00000467323 CLSTN1O94985 981 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 COX20Q5RI15 118 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 DDX41Q9UJV9 622 aaKnown RBP6.49□□□□□ -1.37
MSH2-205ENST00000467323 CHMP3Q9Y3E7 222 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 TBX22Q9Y458 520 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 AK5Q9Y6K8 562 aa6.49□□□□□ -1.37
MSH2-205ENST00000467323 TNFRSF10BO14763 440 aa6.48□□□□□ -1.37
MSH2-205ENST00000467323 ADH1BP00325 375 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms