RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RGPD1P0DJD0 1748 aa10.16□□□□□ -0.78
SND1-205ENST00000467238 PDE4AP27815 886 aa10.15□□□□□ -0.78
SND1-205ENST00000467238 NBPF8Q3BBV2 869 aa10.15□□□□□ -0.78
SND1-205ENST00000467238 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.78
SND1-205ENST00000467238 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
SND1-205ENST00000467238 HPS5Q9UPZ3 1129 aa10.15□□□□□ -0.78
SND1-205ENST00000467238 AKAP12Q02952 1782 aa10.15□□□□□ -0.78
SND1-205ENST00000467238 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.79
SND1-205ENST00000467238 KIAA0232Q92628 1395 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 SPATA31A5Q5VU36 1347 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 SPATA31A7Q8IWB4 1347 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 FAM98CQ17RN3 349 aaKnown RBP10.14□□□□□ -0.79
SND1-205ENST00000467238 KRT27Q7Z3Y8 459 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 PPIP5K1Q6PFW1 1433 aa10.14□□□□□ -0.79
SND1-205ENST00000467238 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
SND1-205ENST00000467238 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
SND1-205ENST00000467238 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
SND1-205ENST00000467238 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
SND1-205ENST00000467238 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 USP19O94966 1318 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 RGPD5Q99666 1765 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 MYT1Q01538 1121 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 MFSD10Q14728 455 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 CHRNA2Q15822 529 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 TJAP1Q5JTD0 557 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 NUTM2GQ5VZR2 741 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 DEFB132Q7Z7B7 95 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
SND1-205ENST00000467238 USP6P35125 1406 aa10.11□□□□□ -0.79
SND1-205ENST00000467238 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
SND1-205ENST00000467238 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
SND1-205ENST00000467238 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.11□□□□□ -0.79
SND1-205ENST00000467238 BRD4O60885 1362 aaPredicted RBP10.11□□□□□ -0.79
SND1-205ENST00000467238 ROCK2O75116 1388 aaKnown RBP10.11□□□□□ -0.79
SND1-205ENST00000467238 CPDO75976 1380 aa10.11□□□□□ -0.79
SND1-205ENST00000467238 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 SPATA31A1Q5TZJ5 1347 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 SSH2Q76I76 1423 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 NEUROD1Q13562 356 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 FBXW7Q969H0 707 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 COL18A1P39060 1754 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 PARP4Q9UKK3 1724 aaKnown RBP10.1□□□□□ -0.79
SND1-205ENST00000467238 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
SND1-205ENST00000467238 SLIT3O75094 1523 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 PHF14O94880 888 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 SF3B2Q13435 895 aaKnown RBP10.09□□□□□ -0.79
SND1-205ENST00000467238 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 STRN4Q9NRL3 753 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 SBF2Q86WG5 1849 aa10.09□□□□□ -0.79
SND1-205ENST00000467238 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
SND1-205ENST00000467238 PPP1R18Q6NYC8 613 aa10.08□□□□□ -0.8
SND1-205ENST00000467238 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
SND1-205ENST00000467238 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
SND1-205ENST00000467238 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
SND1-205ENST00000467238 GCP02774 474 aa10.07□□□□□ -0.8
SND1-205ENST00000467238 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
SND1-205ENST00000467238 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
SND1-205ENST00000467238 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
SND1-205ENST00000467238 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
SND1-205ENST00000467238 USP54Q70EL1 1684 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 SBNO2Q9Y2G9 1366 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 BAG6P46379 1132 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 EVA1CP58658 441 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 LARP1Q6PKG0 1096 aaKnown RBP10.06□□□□□ -0.8
SND1-205ENST00000467238 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 DDX27Q96GQ7 796 aaKnown RBP10.06□□□□□ -0.8
SND1-205ENST00000467238 LRP5O75197 1615 aa10.06□□□□□ -0.8
SND1-205ENST00000467238 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
SND1-205ENST00000467238 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
SND1-205ENST00000467238 LTN1O94822 1766 aa10.05□□□□□ -0.8
SND1-205ENST00000467238 RREB1Q92766 1687 aa10.05□□□□□ -0.8
SND1-205ENST00000467238 LRRC37A3O60309 1634 aa10.04□□□□□ -0.8
SND1-205ENST00000467238 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
SND1-205ENST00000467238 TCP11L2Q8N4U5 519 aa10.04□□□□□ -0.8
SND1-205ENST00000467238 THRAP3Q9Y2W1 955 aaKnown RBP10.04□□□□□ -0.8
SND1-205ENST00000467238 CPSF1Q10570 1443 aaKnown RBP10.04□□□□□ -0.8
SND1-205ENST00000467238 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
SND1-205ENST00000467238 TTC21BQ7Z4L5 1316 aa10.04□□□□□ -0.8
SND1-205ENST00000467238 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 CRB1P82279 1406 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 MTRQ99707 1265 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
SND1-205ENST00000467238 NFAT5O94916 1531 aa10.02□□□□□ -0.8
SND1-205ENST00000467238 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
SND1-205ENST00000467238 RGPD4Q7Z3J3 1758 aa10.02□□□□□ -0.81
SND1-205ENST00000467238 PDE3BQ13370 1112 aa10.02□□□□□ -0.81
SND1-205ENST00000467238 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
SND1-205ENST00000467238 CD163L1Q9NR16 1453 aa10.02□□□□□ -0.81
SND1-205ENST00000467238 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
SND1-205ENST00000467238 TONSLQ96HA7 1378 aa10.01□□□□□ -0.81
SND1-205ENST00000467238 ZBTB7CA1YPR0 619 aa10.01□□□□□ -0.81
SND1-205ENST00000467238 TRIM37O94972 964 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms