RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 LINC00116Q8NCU8 138 aa30.45■■■□□ 2.47
SSR2-204ENST00000467041 AK7Q96M32 723 aa30.45■■■□□ 2.47
SSR2-204ENST00000467041 SYT17Q9BSW7 474 aa30.45■■■□□ 2.47
SSR2-204ENST00000467041 POLD1P28340 1107 aa30.44■■■□□ 2.46
SSR2-204ENST00000467041 COL24A1Q17RW2 1714 aa30.44■■■□□ 2.46
SSR2-204ENST00000467041 U2SURPO15042 1029 aaKnown RBP30.43■■■□□ 2.46
SSR2-204ENST00000467041 NFATC2IPQ8NCF5 419 aa30.43■■■□□ 2.46
SSR2-204ENST00000467041 CFAP53Q96M91 514 aa30.42■■■□□ 2.46
SSR2-204ENST00000467041 PPP2R1AP30153 589 aa30.41■■■□□ 2.46
SSR2-204ENST00000467041 MTHFSDQ2M296 383 aaKnown RBP30.41■■■□□ 2.46
SSR2-204ENST00000467041 AMIGO3Q86WK7 504 aa30.4■■■□□ 2.46
SSR2-204ENST00000467041 SLC4A9Q96Q91 983 aa30.4■■■□□ 2.46
SSR2-204ENST00000467041 RBM42Q9BTD8 480 aaKnown RBP30.4■■■□□ 2.46
SSR2-204ENST00000467041 DCAF8L1A6NGE4 600 aa30.39■■■□□ 2.46
SSR2-204ENST00000467041 SCN11AQ9UI33 1791 aa30.38■■■□□ 2.45
SSR2-204ENST00000467041 LGR6Q9HBX8 967 aa30.38■■■□□ 2.45
SSR2-204ENST00000467041 MAP3K5Q99683 1374 aa30.38■■■□□ 2.45
SSR2-204ENST00000467041 UBR3Q6ZT12 1888 aa30.37■■■□□ 2.45
SSR2-204ENST00000467041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.36■■■□□ 2.45
SSR2-204ENST00000467041 RNMTO43148 476 aaKnown RBP30.36■■■□□ 2.45
SSR2-204ENST00000467041 SSFA2P28290 1259 aa30.36■■■□□ 2.45
SSR2-204ENST00000467041 ZNF831Q5JPB2 1677 aa30.36■■■□□ 2.45
SSR2-204ENST00000467041 PHF14O94880 888 aa30.35■■■□□ 2.45
SSR2-204ENST00000467041 SMIM5Q71RC9 77 aa30.35■■■□□ 2.45
SSR2-204ENST00000467041 SLC52A2Q9HAB3 445 aa30.35■■■□□ 2.45
SSR2-204ENST00000467041 GNPATO15228 680 aa30.34■■■□□ 2.45
SSR2-204ENST00000467041 MSL1Q68DK7 614 aa30.34■■■□□ 2.45
SSR2-204ENST00000467041 NUDCQ9Y266 331 aa30.34■■■□□ 2.45
SSR2-204ENST00000467041 PTCD1O75127 700 aaKnown RBP30.32■■■□□ 2.44
SSR2-204ENST00000467041 RC3H1Q5TC82 1133 aaKnown RBP30.31■■■□□ 2.44
SSR2-204ENST00000467041 GAS2L2Q8NHY3 880 aa30.3■■■□□ 2.44
SSR2-204ENST00000467041 KLHL34Q8N239 644 aa30.29■■■□□ 2.44
SSR2-204ENST00000467041 RSPH6AQ9H0K4 717 aa30.29■■■□□ 2.44
SSR2-204ENST00000467041 MRC1P22897 1456 aa30.29■■■□□ 2.44
SSR2-204ENST00000467041 CNTNAP4Q9C0A0 1308 aa30.28■■■□□ 2.44
SSR2-204ENST00000467041 ADAMTS7Q9UKP4 1686 aa30.28■■■□□ 2.44
SSR2-204ENST00000467041 RTCBQ9Y3I0 505 aaKnown RBP30.28■■■□□ 2.44
SSR2-204ENST00000467041 PRKAR2BP31323 418 aa30.27■■■□□ 2.44
SSR2-204ENST00000467041 GNAT3A8MTJ3 354 aa30.26■■■□□ 2.43
SSR2-204ENST00000467041 U2AF1L5P0DN76 240 aaPredicted RBP30.26■■■□□ 2.43
SSR2-204ENST00000467041 COL5A3P25940 1745 aaPredicted RBP30.26■■■□□ 2.43
SSR2-204ENST00000467041 U2AF1Q01081 240 aaKnown RBP eCLIP30.26■■■□□ 2.43
SSR2-204ENST00000467041 PHACTR3Q96KR7 559 aa30.26■■■□□ 2.43
SSR2-204ENST00000467041 VIRMAQ69YN4 1812 aaKnown RBP30.26■■■□□ 2.43
SSR2-204ENST00000467041 TRAPPC3LQ5T215 181 aa30.25■■■□□ 2.43
SSR2-204ENST00000467041 RPS6KA4O75676 772 aa30.24■■■□□ 2.43
SSR2-204ENST00000467041 FCHSD2O94868 740 aa30.23■■■□□ 2.43
SSR2-204ENST00000467041 SLC39A6Q13433 755 aa30.23■■■□□ 2.43
SSR2-204ENST00000467041 IL17REQ8NFR9 667 aa30.23■■■□□ 2.43
SSR2-204ENST00000467041 ADRA2BP18089 450 aa30.22■■■□□ 2.43
SSR2-204ENST00000467041 MYH14Q7Z406 1995 aaKnown RBP30.21■■■□□ 2.43
SSR2-204ENST00000467041 CRKLP46109 303 aaKnown RBP30.2■■■□□ 2.43
SSR2-204ENST00000467041 NLGN2Q8NFZ4 835 aa30.2■■■□□ 2.43
SSR2-204ENST00000467041 ARHGEF1Q92888 912 aaKnown RBP30.2■■■□□ 2.43
SSR2-204ENST00000467041 CICQ96RK0 1608 aaPredicted RBP30.19■■■□□ 2.42
SSR2-204ENST00000467041 TJP1Q07157 1748 aa30.19■■■□□ 2.42
SSR2-204ENST00000467041 TEFQ10587 303 aa30.18■■■□□ 2.42
SSR2-204ENST00000467041 DDX10Q13206 875 aaKnown RBP30.18■■■□□ 2.42
SSR2-204ENST00000467041 DNAJC10Q8IXB1 793 aa30.18■■■□□ 2.42
SSR2-204ENST00000467041 CD2APQ9Y5K6 639 aa30.18■■■□□ 2.42
SSR2-204ENST00000467041 YY1P25490 414 aa30.17■■■□□ 2.42
SSR2-204ENST00000467041 KCPQ6ZWJ8 1503 aa30.16■■■□□ 2.42
SSR2-204ENST00000467041 RFC4P35249 363 aa30.15■■■□□ 2.42
SSR2-204ENST00000467041 INTS5Q6P9B9 1019 aaKnown RBP30.15■■■□□ 2.42
SSR2-204ENST00000467041 GPR162Q16538 588 aa30.14■■■□□ 2.42
SSR2-204ENST00000467041 VSIG10Q8N0Z9 540 aa30.14■■■□□ 2.42
SSR2-204ENST00000467041 NLGN1Q8N2Q7 840 aa30.14■■■□□ 2.42
SSR2-204ENST00000467041 CEMIPQ8WUJ3 1361 aa30.14■■■□□ 2.41
SSR2-204ENST00000467041 UTRNP46939 3433 aa30.13■■■□□ 2.41
SSR2-204ENST00000467041 RALBP1Q15311 655 aa30.13■■■□□ 2.41
SSR2-204ENST00000467041 TTC5Q8N0Z6 440 aa30.13■■■□□ 2.41
SSR2-204ENST00000467041 CYP19A1P11511 503 aaPredicted RBP30.12■■■□□ 2.41
SSR2-204ENST00000467041 CCDC87Q9NVE4 849 aa30.12■■■□□ 2.41
SSR2-204ENST00000467041 MMP10P09238 476 aa30.11■■■□□ 2.41
SSR2-204ENST00000467041 GYS1P13807 737 aa30.11■■■□□ 2.41
SSR2-204ENST00000467041 ZNF790Q6PG37 636 aa30.1■■■□□ 2.41
SSR2-204ENST00000467041 UBR2Q8IWV8 1755 aa30.1■■■□□ 2.41
SSR2-204ENST00000467041 SIPA1L3O60292 1781 aaPredicted RBP30.08■■■□□ 2.41
SSR2-204ENST00000467041 PELP1Q8IZL8 1130 aaKnown RBP30.08■■■□□ 2.41
SSR2-204ENST00000467041 RTF1Q92541 710 aaKnown RBP30.08■■■□□ 2.41
SSR2-204ENST00000467041 ZNF496Q96IT1 587 aaPredicted RBP30.08■■■□□ 2.41
SSR2-204ENST00000467041 C4AP0C0L4 1744 aa30.06■■■□□ 2.4
SSR2-204ENST00000467041 HTATSF1O43719 755 aaKnown RBP30.06■■■□□ 2.4
SSR2-204ENST00000467041 GOLGB1Q14789 3259 aaKnown RBP30.06■■■□□ 2.4
SSR2-204ENST00000467041 SOS1Q07889 1333 aaPredicted RBP30.05■■■□□ 2.4
SSR2-204ENST00000467041 USP42Q9H9J4 1324 aaKnown RBP30.05■■■□□ 2.4
SSR2-204ENST00000467041 SRP68Q9UHB9 627 aaKnown RBP30.05■■■□□ 2.4
SSR2-204ENST00000467041 HEG1Q9ULI3 1381 aa30.04■■■□□ 2.4
SSR2-204ENST00000467041 BTBD11A6QL63 1104 aa30.04■■■□□ 2.4
SSR2-204ENST00000467041 NEFMP07197 916 aa30.04■■■□□ 2.4
SSR2-204ENST00000467041 MCM10Q7L590 875 aa30.04■■■□□ 2.4
SSR2-204ENST00000467041 STARD3NLO95772 234 aa30.03■■■□□ 2.4
SSR2-204ENST00000467041 PLEKHF1Q96S99 279 aa30.03■■■□□ 2.4
SSR2-204ENST00000467041 TEX13AQ9BXU3 409 aaPredicted RBP30.03■■■□□ 2.4
SSR2-204ENST00000467041 ZBTB1Q9Y2K1 713 aa30.03■■■□□ 2.4
SSR2-204ENST00000467041 YBX3P16989 372 aaKnown RBP eCLIP30.02■■■□□ 2.4
SSR2-204ENST00000467041 FMNL2Q96PY5 1086 aa30.02■■■□□ 2.4
SSR2-204ENST00000467041 DCTN1Q14203 1278 aa30.01■■■□□ 2.39
SSR2-204ENST00000467041 CHD4Q14839 1912 aa30■■■□□ 2.39
SSR2-204ENST00000467041 KCNQ3O43525 872 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms