RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 PHF14O94880 888 aa21.48■■□□□ 1.03
COL16A1-207ENST00000466829 CFAP53Q96M91 514 aa21.48■■□□□ 1.03
COL16A1-207ENST00000466829 KDRP35968 1356 aa21.48■■□□□ 1.03
COL16A1-207ENST00000466829 SYT17Q9BSW7 474 aa21.47■■□□□ 1.03
COL16A1-207ENST00000466829 ITGB4P16144 1822 aa21.46■■□□□ 1.03
COL16A1-207ENST00000466829 MSL1Q68DK7 614 aa21.46■■□□□ 1.03
COL16A1-207ENST00000466829 ANP32CO43423 234 aa21.45■■□□□ 1.02
COL16A1-207ENST00000466829 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
COL16A1-207ENST00000466829 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.02
COL16A1-207ENST00000466829 LINC00116Q8NCU8 138 aa21.45■■□□□ 1.02
COL16A1-207ENST00000466829 GNPATO15228 680 aa21.43■■□□□ 1.02
COL16A1-207ENST00000466829 ITPK1Q13572 414 aa21.43■■□□□ 1.02
COL16A1-207ENST00000466829 KDM6AO15550 1401 aaPredicted RBP21.43■■□□□ 1.02
COL16A1-207ENST00000466829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.42■■□□□ 1.02
COL16A1-207ENST00000466829 PTCD1O75127 700 aaKnown RBP21.42■■□□□ 1.02
COL16A1-207ENST00000466829 SMIM5Q71RC9 77 aa21.42■■□□□ 1.02
COL16A1-207ENST00000466829 C5P01031 1676 aa21.41■■□□□ 1.02
COL16A1-207ENST00000466829 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
COL16A1-207ENST00000466829 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
COL16A1-207ENST00000466829 SSFA2P28290 1259 aa21.39■■□□□ 1.01
COL16A1-207ENST00000466829 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
COL16A1-207ENST00000466829 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
COL16A1-207ENST00000466829 QSER1Q2KHR3 1735 aa21.38■■□□□ 1.01
COL16A1-207ENST00000466829 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
COL16A1-207ENST00000466829 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
COL16A1-207ENST00000466829 SLC52A2Q9HAB3 445 aa21.38■■□□□ 1.01
COL16A1-207ENST00000466829 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
COL16A1-207ENST00000466829 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
COL16A1-207ENST00000466829 RTCBQ9Y3I0 505 aaKnown RBP21.37■■□□□ 1.01
COL16A1-207ENST00000466829 TUBGCP6Q96RT7 1819 aa21.36■■□□□ 1.01
COL16A1-207ENST00000466829 U2AF1L5P0DN76 240 aaPredicted RBP21.36■■□□□ 1.01
COL16A1-207ENST00000466829 YY1P25490 414 aa21.36■■□□□ 1.01
COL16A1-207ENST00000466829 U2AF1Q01081 240 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL16A1-207ENST00000466829 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
COL16A1-207ENST00000466829 SLC4A9Q96Q91 983 aa21.36■■□□□ 1.01
COL16A1-207ENST00000466829 GPR162Q16538 588 aa21.35■■□□□ 1.01
COL16A1-207ENST00000466829 TRAPPC3LQ5T215 181 aa21.35■■□□□ 1.01
COL16A1-207ENST00000466829 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
COL16A1-207ENST00000466829 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
COL16A1-207ENST00000466829 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
COL16A1-207ENST00000466829 PRKAR2BP31323 418 aa21.33■■□□□ 1.01
COL16A1-207ENST00000466829 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1.01
COL16A1-207ENST00000466829 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1.01
COL16A1-207ENST00000466829 GNAT3A8MTJ3 354 aa21.32■■□□□ 1
COL16A1-207ENST00000466829 SLC39A6Q13433 755 aa21.32■■□□□ 1
COL16A1-207ENST00000466829 RFC4P35249 363 aa21.31■■□□□ 1
COL16A1-207ENST00000466829 TEFQ10587 303 aa21.31■■□□□ 1
COL16A1-207ENST00000466829 CNTNAP4Q9C0A0 1308 aa21.3■■□□□ 1
COL16A1-207ENST00000466829 NLGN2Q8NFZ4 835 aa21.3■■□□□ 1
COL16A1-207ENST00000466829 RPS6KA4O75676 772 aa21.29■■□□□ 1
COL16A1-207ENST00000466829 CRKLP46109 303 aaKnown RBP21.29■■□□□ 1
COL16A1-207ENST00000466829 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
COL16A1-207ENST00000466829 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
COL16A1-207ENST00000466829 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
COL16A1-207ENST00000466829 ADRA2BP18089 450 aa21.28■■□□□ 1
COL16A1-207ENST00000466829 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
COL16A1-207ENST00000466829 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
COL16A1-207ENST00000466829 NEFMP07197 916 aa21.27■■□□□ 1
COL16A1-207ENST00000466829 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
COL16A1-207ENST00000466829 CD2APQ9Y5K6 639 aa21.27■■□□□ 1
COL16A1-207ENST00000466829 FCHSD2O94868 740 aa21.26■□□□□ 0.99
COL16A1-207ENST00000466829 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
COL16A1-207ENST00000466829 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
COL16A1-207ENST00000466829 MMP10P09238 476 aa21.25■□□□□ 0.99
COL16A1-207ENST00000466829 UBR3Q6ZT12 1888 aa21.25■□□□□ 0.99
COL16A1-207ENST00000466829 IL17REQ8NFR9 667 aa21.25■□□□□ 0.99
COL16A1-207ENST00000466829 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
COL16A1-207ENST00000466829 CCDC87Q9NVE4 849 aa21.23■□□□□ 0.99
COL16A1-207ENST00000466829 MRC1P22897 1456 aa21.22■□□□□ 0.99
COL16A1-207ENST00000466829 COL24A1Q17RW2 1714 aa21.22■□□□□ 0.99
COL16A1-207ENST00000466829 INTS5Q6P9B9 1019 aaKnown RBP21.22■□□□□ 0.99
COL16A1-207ENST00000466829 ZPR1O75312 459 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 STARD3NLO95772 234 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 CYP19A1P11511 503 aaPredicted RBP21.2■□□□□ 0.98
COL16A1-207ENST00000466829 GYS1P13807 737 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 RALBP1Q15311 655 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 ZNF790Q6PG37 636 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 VSIG10Q8N0Z9 540 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 SRP68Q9UHB9 627 aaKnown RBP21.2■□□□□ 0.98
COL16A1-207ENST00000466829 PARP3Q9Y6F1 533 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 ZNF831Q5JPB2 1677 aa21.2■□□□□ 0.98
COL16A1-207ENST00000466829 BTBD11A6QL63 1104 aa21.19■□□□□ 0.98
COL16A1-207ENST00000466829 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
COL16A1-207ENST00000466829 MCM10Q7L590 875 aa21.19■□□□□ 0.98
COL16A1-207ENST00000466829 WWC3Q9ULE0 1092 aa21.19■□□□□ 0.98
COL16A1-207ENST00000466829 ZNF496Q96IT1 587 aaPredicted RBP21.18■□□□□ 0.98
COL16A1-207ENST00000466829 YBX3P16989 372 aaKnown RBP eCLIP21.17■□□□□ 0.98
COL16A1-207ENST00000466829 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
COL16A1-207ENST00000466829 PNNQ9H307 717 aaKnown RBP21.17■□□□□ 0.98
COL16A1-207ENST00000466829 COL5A3P25940 1745 aaPredicted RBP21.16■□□□□ 0.98
COL16A1-207ENST00000466829 USP42Q9H9J4 1324 aaKnown RBP21.16■□□□□ 0.98
COL16A1-207ENST00000466829 DCTN1Q14203 1278 aa21.16■□□□□ 0.98
COL16A1-207ENST00000466829 FMNL2Q96PY5 1086 aa21.16■□□□□ 0.98
COL16A1-207ENST00000466829 TEX13AQ9BXU3 409 aaPredicted RBP21.16■□□□□ 0.98
COL16A1-207ENST00000466829 ZBTB1Q9Y2K1 713 aa21.16■□□□□ 0.98
COL16A1-207ENST00000466829 KCPQ6ZWJ8 1503 aa21.15■□□□□ 0.98
COL16A1-207ENST00000466829 FKBP8Q14318 412 aa21.15■□□□□ 0.98
COL16A1-207ENST00000466829 NPM2Q86SE8 214 aaKnown RBP21.15■□□□□ 0.98
COL16A1-207ENST00000466829 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
COL16A1-207ENST00000466829 CEMIPQ8WUJ3 1361 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms