RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
CHMP2B-202ENST00000466696 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
CHMP2B-202ENST00000466696 ETNK1Q9HBU6 452 aa9.12□□□□□ -0.95
CHMP2B-202ENST00000466696 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 PHKA2P46019 1235 aa9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 NSFL1CQ9UNZ2 370 aaKnown RBP9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 IGF1RP08069 1367 aa9.11□□□□□ -0.95
CHMP2B-202ENST00000466696 GSK3AP49840 483 aa9.1□□□□□ -0.95
CHMP2B-202ENST00000466696 RASSF7Q02833 373 aa9.1□□□□□ -0.95
CHMP2B-202ENST00000466696 PLPP7Q8NBV4 271 aa9.1□□□□□ -0.95
CHMP2B-202ENST00000466696 GPAMQ9HCL2 828 aa9.1□□□□□ -0.95
CHMP2B-202ENST00000466696 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
CHMP2B-202ENST00000466696 MX2P20592 715 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 TLR1Q15399 786 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 RHBDD1Q8TEB9 315 aa9.09□□□□□ -0.95
CHMP2B-202ENST00000466696 GDF11O95390 407 aa9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 PGBD3Q8N328 593 aa9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 SCARF2Q96GP6 870 aaPredicted RBP9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 CFHR5Q9BXR6 569 aa9.08□□□□□ -0.96
CHMP2B-202ENST00000466696 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
CHMP2B-202ENST00000466696 INHAP05111 366 aa9.07□□□□□ -0.96
CHMP2B-202ENST00000466696 GDF10P55107 478 aa9.07□□□□□ -0.96
CHMP2B-202ENST00000466696 PHF24Q9UPV7 400 aa9.07□□□□□ -0.96
CHMP2B-202ENST00000466696 BCRP11274 1271 aa9.06□□□□□ -0.96
CHMP2B-202ENST00000466696 SCNN1DP51172 638 aa9.06□□□□□ -0.96
CHMP2B-202ENST00000466696 MSX1P28360 303 aa9.05□□□□□ -0.96
CHMP2B-202ENST00000466696 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
CHMP2B-202ENST00000466696 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
CHMP2B-202ENST00000466696 LRRC4BQ9NT99 713 aa9.05□□□□□ -0.96
CHMP2B-202ENST00000466696 RAD21O60216 631 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 THBS1P07996 1170 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 IRS1P35568 1242 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 MAP2K3P46734 347 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 ACDQ96AP0 544 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
CHMP2B-202ENST00000466696 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 SMTNP53814 917 aa9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 EML3Q32P44 896 aa9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 ALG2Q9H553 416 aa9.03□□□□□ -0.96
CHMP2B-202ENST00000466696 PLA2G4AP47712 749 aa9.02□□□□□ -0.97
CHMP2B-202ENST00000466696 FLIIQ13045 1269 aa9.02□□□□□ -0.97
CHMP2B-202ENST00000466696 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
CHMP2B-202ENST00000466696 NEDD1Q8NHV4 660 aa9.02□□□□□ -0.97
CHMP2B-202ENST00000466696 CRISPLD1Q9H336 500 aa9.02□□□□□ -0.97
CHMP2B-202ENST00000466696 PIK3CDO00329 1044 aa9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 SKIP12755 728 aa9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 SLC4A9Q96Q91 983 aa9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 OXCT2Q9BYC2 517 aaPredicted RBP9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 ATXN7L1Q9ULK2 861 aaPredicted RBP9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 NOD1Q9Y239 953 aa9.01□□□□□ -0.97
CHMP2B-202ENST00000466696 TMEM229AB2RXF0 380 aa9□□□□□ -0.97
CHMP2B-202ENST00000466696 PODNQ7Z5L7 613 aa9□□□□□ -0.97
CHMP2B-202ENST00000466696 POM121Q96HA1 1249 aa9□□□□□ -0.97
CHMP2B-202ENST00000466696 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
CHMP2B-202ENST00000466696 DNMT3AQ9Y6K1 912 aaPredicted RBP9□□□□□ -0.97
CHMP2B-202ENST00000466696 PHF20L1A8MW92 1017 aa8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 OIP5O43482 229 aa8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 UBTFP17480 764 aaKnown RBP8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 FIGNL1Q6PIW4 674 aa8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 BEND7Q8N7W2 519 aaPredicted RBP8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 PCDHGA11Q9Y5H2 935 aa8.99□□□□□ -0.97
CHMP2B-202ENST00000466696 A6NJY4 79 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 CDK2AP1O14519 115 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 BACH1O14867 736 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 MTFR1Q15390 333 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 KLRG1Q96E93 195 aa8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 GDF2Q9UK05 429 aaPredicted RBP8.98□□□□□ -0.97
CHMP2B-202ENST00000466696 GTF2IP78347 998 aa8.97□□□□□ -0.97
CHMP2B-202ENST00000466696 NLRP8Q86W28 1048 aa8.97□□□□□ -0.97
CHMP2B-202ENST00000466696 ABHD17AQ96GS6 310 aa8.97□□□□□ -0.97
CHMP2B-202ENST00000466696 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
CHMP2B-202ENST00000466696 BNIP3LO60238 219 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 BMP4P12644 408 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 ATP4AP20648 1035 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 FGFR3P22607 806 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 NCOA4Q13772 614 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
CHMP2B-202ENST00000466696 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 FOXK2Q01167 660 aa8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 PSME1Q06323 249 aa8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 GOLGA6L1Q8N7Z2 621 aa8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 ZCCHC2Q9C0B9 1178 aaKnown RBP8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 ZDHHC3Q9NYG2 299 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms