RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 ZFAND3Q9H8U3 227 aa12.02□□□□□ -0.49
LSG1-206ENST00000466391 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.49
LSG1-206ENST00000466391 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
LSG1-206ENST00000466391 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
LSG1-206ENST00000466391 MYT1Q01538 1121 aa12.01□□□□□ -0.49
LSG1-206ENST00000466391 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
LSG1-206ENST00000466391 MAFBQ9Y5Q3 323 aaPredicted RBP12.01□□□□□ -0.49
LSG1-206ENST00000466391 USP17L3A6NCW0 530 aa12□□□□□ -0.49
LSG1-206ENST00000466391 USP17L4A6NCW7 530 aa12□□□□□ -0.49
LSG1-206ENST00000466391 RFX1P22670 979 aa12□□□□□ -0.49
LSG1-206ENST00000466391 SCTRP47872 440 aa12□□□□□ -0.49
LSG1-206ENST00000466391 NCOA4Q13772 614 aa12□□□□□ -0.49
LSG1-206ENST00000466391 USP17L2Q6R6M4 530 aa12□□□□□ -0.49
LSG1-206ENST00000466391 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
LSG1-206ENST00000466391 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
LSG1-206ENST00000466391 GRIN2AQ12879 1464 aa12□□□□□ -0.49
LSG1-206ENST00000466391 MAPKBP1O60336 1514 aa12□□□□□ -0.49
LSG1-206ENST00000466391 KIAA0556O60303 1618 aa12□□□□□ -0.49
LSG1-206ENST00000466391 AVPP01185 164 aa11.99□□□□□ -0.49
LSG1-206ENST00000466391 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
LSG1-206ENST00000466391 ESF1Q9H501 851 aaKnown RBP11.99□□□□□ -0.49
LSG1-206ENST00000466391 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
LSG1-206ENST00000466391 NCOA2Q15596 1464 aa11.99□□□□□ -0.49
LSG1-206ENST00000466391 TCOF1Q13428 1488 aaKnown RBP11.98□□□□□ -0.49
LSG1-206ENST00000466391 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
LSG1-206ENST00000466391 LILRA1O75019 489 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 ERVK-9P63128 1117 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 USP4Q13107 963 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 CBLBQ13191 982 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 EML3Q32P44 896 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
LSG1-206ENST00000466391 MYCP01106 439 aaPredicted RBP11.97□□□□□ -0.49
LSG1-206ENST00000466391 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
LSG1-206ENST00000466391 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.49
LSG1-206ENST00000466391 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
LSG1-206ENST00000466391 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
LSG1-206ENST00000466391 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.5
LSG1-206ENST00000466391 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
LSG1-206ENST00000466391 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
LSG1-206ENST00000466391 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
LSG1-206ENST00000466391 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
LSG1-206ENST00000466391 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
LSG1-206ENST00000466391 PTPN23Q9H3S7 1636 aa11.94□□□□□ -0.5
LSG1-206ENST00000466391 NOD1Q9Y239 953 aa11.94□□□□□ -0.5
LSG1-206ENST00000466391 NUP160Q12769 1436 aa11.94□□□□□ -0.5
LSG1-206ENST00000466391 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
LSG1-206ENST00000466391 AXIN1O15169 862 aa11.93□□□□□ -0.5
LSG1-206ENST00000466391 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
LSG1-206ENST00000466391 Q6ZNB5 142 aa11.93□□□□□ -0.5
LSG1-206ENST00000466391 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
LSG1-206ENST00000466391 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
LSG1-206ENST00000466391 CDCA8Q53HL2 280 aa11.92□□□□□ -0.5
LSG1-206ENST00000466391 Q6ZVU0 165 aa11.92□□□□□ -0.5
LSG1-206ENST00000466391 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
LSG1-206ENST00000466391 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
LSG1-206ENST00000466391 SMCPP49901 116 aaPredicted RBP11.91□□□□□ -0.5
LSG1-206ENST00000466391 FAM50AQ14320 339 aaKnown RBP11.91□□□□□ -0.5
LSG1-206ENST00000466391 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
LSG1-206ENST00000466391 CEP170Q5SW79 1584 aa11.91□□□□□ -0.5
LSG1-206ENST00000466391 ADH1AP07327 375 aa11.9□□□□□ -0.5
LSG1-206ENST00000466391 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
LSG1-206ENST00000466391 VRTNQ9H8Y1 702 aa11.9□□□□□ -0.5
LSG1-206ENST00000466391 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
LSG1-206ENST00000466391 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.89□□□□□ -0.51
LSG1-206ENST00000466391 GTF2IP78347 998 aa11.89□□□□□ -0.51
LSG1-206ENST00000466391 RELBQ01201 579 aa11.89□□□□□ -0.51
LSG1-206ENST00000466391 CYP2U1Q7Z449 544 aa11.89□□□□□ -0.51
LSG1-206ENST00000466391 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
LSG1-206ENST00000466391 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
LSG1-206ENST00000466391 UACAQ9BZF9 1416 aa11.88□□□□□ -0.51
LSG1-206ENST00000466391 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
LSG1-206ENST00000466391 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
LSG1-206ENST00000466391 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
LSG1-206ENST00000466391 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
LSG1-206ENST00000466391 NAIPQ13075 1403 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 PTPRKQ15262 1439 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 CDK13Q14004 1512 aaKnown RBP11.87□□□□□ -0.51
LSG1-206ENST00000466391 BMP1P13497 986 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 RASA1P20936 1047 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 PSME1Q06323 249 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 PCDHGA11Q9Y5H2 935 aa11.87□□□□□ -0.51
LSG1-206ENST00000466391 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
LSG1-206ENST00000466391 UPP2O95045 317 aa11.86□□□□□ -0.51
LSG1-206ENST00000466391 ITGAEP38570 1179 aa11.86□□□□□ -0.51
LSG1-206ENST00000466391 MRPL14Q6P1L8 145 aaKnown RBP11.86□□□□□ -0.51
LSG1-206ENST00000466391 OGFOD1Q8N543 542 aa11.86□□□□□ -0.51
LSG1-206ENST00000466391 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
LSG1-206ENST00000466391 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
LSG1-206ENST00000466391 ZNF395Q9H8N7 513 aaPredicted RBP11.86□□□□□ -0.51
LSG1-206ENST00000466391 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
LSG1-206ENST00000466391 PTGIRP43119 386 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 CLDN10P78369 228 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 C6orf118Q5T5N4 469 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 PBXIP1Q96AQ6 731 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 DNAAF2Q9NVR5 837 aaKnown RBP11.85□□□□□ -0.51
LSG1-206ENST00000466391 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
LSG1-206ENST00000466391 SRPK2P78362 688 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms