RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
UBE4B-206ENST00000466379 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
UBE4B-206ENST00000466379 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
UBE4B-206ENST00000466379 RNMTO43148 476 aaKnown RBP17.06■□□□□ 0.32
UBE4B-206ENST00000466379 TEFQ10587 303 aa17.06■□□□□ 0.32
UBE4B-206ENST00000466379 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 NUCB1Q02818 461 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 MEIS3Q99687 375 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 SLAIN2Q9P270 581 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 FLIIQ13045 1269 aa17.05■□□□□ 0.32
UBE4B-206ENST00000466379 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
UBE4B-206ENST00000466379 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
UBE4B-206ENST00000466379 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
UBE4B-206ENST00000466379 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
UBE4B-206ENST00000466379 HDGFL1Q5TGJ6 251 aa17.04■□□□□ 0.32
UBE4B-206ENST00000466379 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
UBE4B-206ENST00000466379 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
UBE4B-206ENST00000466379 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
UBE4B-206ENST00000466379 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
UBE4B-206ENST00000466379 ATP10DQ9P241 1426 aa17.02■□□□□ 0.32
UBE4B-206ENST00000466379 GCC1Q96CN9 775 aa17.01■□□□□ 0.31
UBE4B-206ENST00000466379 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
UBE4B-206ENST00000466379 MEGF6O75095 1541 aa17.01■□□□□ 0.31
UBE4B-206ENST00000466379 BCL11AQ9H165 835 aa17■□□□□ 0.31
UBE4B-206ENST00000466379 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
UBE4B-206ENST00000466379 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
UBE4B-206ENST00000466379 CEP85Q6P2H3 762 aa17■□□□□ 0.31
UBE4B-206ENST00000466379 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
UBE4B-206ENST00000466379 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
UBE4B-206ENST00000466379 ANKRD44Q8N8A2 993 aa16.99■□□□□ 0.31
UBE4B-206ENST00000466379 CPDO75976 1380 aa16.98■□□□□ 0.31
UBE4B-206ENST00000466379 ANXA1P04083 346 aa16.98■□□□□ 0.31
UBE4B-206ENST00000466379 CHPF2Q9P2E5 772 aa16.98■□□□□ 0.31
UBE4B-206ENST00000466379 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
UBE4B-206ENST00000466379 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
UBE4B-206ENST00000466379 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
UBE4B-206ENST00000466379 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
UBE4B-206ENST00000466379 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
UBE4B-206ENST00000466379 SLC4A3P48751 1232 aa16.96■□□□□ 0.31
UBE4B-206ENST00000466379 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
UBE4B-206ENST00000466379 PHKG2P15735 406 aa16.96■□□□□ 0.31
UBE4B-206ENST00000466379 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
UBE4B-206ENST00000466379 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
UBE4B-206ENST00000466379 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
UBE4B-206ENST00000466379 ADAMTS7Q9UKP4 1686 aa16.96■□□□□ 0.31
UBE4B-206ENST00000466379 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
UBE4B-206ENST00000466379 ABCC6O95255 1503 aa16.95■□□□□ 0.3
UBE4B-206ENST00000466379 APBB1O00213 710 aa16.95■□□□□ 0.3
UBE4B-206ENST00000466379 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
UBE4B-206ENST00000466379 HOXB7P09629 217 aa16.94■□□□□ 0.3
UBE4B-206ENST00000466379 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
UBE4B-206ENST00000466379 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
UBE4B-206ENST00000466379 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
UBE4B-206ENST00000466379 CYP27B1O15528 508 aa16.93■□□□□ 0.3
UBE4B-206ENST00000466379 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
UBE4B-206ENST00000466379 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
UBE4B-206ENST00000466379 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
UBE4B-206ENST00000466379 SMARCA5O60264 1052 aaPredicted RBP16.92■□□□□ 0.3
UBE4B-206ENST00000466379 GNAI2P04899 355 aa16.92■□□□□ 0.3
UBE4B-206ENST00000466379 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
UBE4B-206ENST00000466379 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
UBE4B-206ENST00000466379 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
UBE4B-206ENST00000466379 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
UBE4B-206ENST00000466379 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
UBE4B-206ENST00000466379 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
UBE4B-206ENST00000466379 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
UBE4B-206ENST00000466379 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
UBE4B-206ENST00000466379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.33e-9■■□□□ 13.2
UBE4B-206ENST00000466379 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
UBE4B-206ENST00000466379 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
UBE4B-206ENST00000466379 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
UBE4B-206ENST00000466379 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
UBE4B-206ENST00000466379 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
UBE4B-206ENST00000466379 USP44Q9H0E7 712 aa16.9■□□□□ 0.3
UBE4B-206ENST00000466379 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
UBE4B-206ENST00000466379 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
UBE4B-206ENST00000466379 COL5A2P05997 1499 aaPredicted RBP16.89■□□□□ 0.29
UBE4B-206ENST00000466379 GNAI3P08754 354 aa16.89■□□□□ 0.29
UBE4B-206ENST00000466379 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
UBE4B-206ENST00000466379 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
UBE4B-206ENST00000466379 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
UBE4B-206ENST00000466379 BMP2KLQ5H9B9 411 aa16.89■□□□□ 0.29
UBE4B-206ENST00000466379 C5P01031 1676 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 HMMRO75330 724 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 PLEKHM2Q8IWE5 1019 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 ADCY9O60503 1353 aa16.88■□□□□ 0.29
UBE4B-206ENST00000466379 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
UBE4B-206ENST00000466379 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
UBE4B-206ENST00000466379 UBTFL1P0CB47 393 aaPredicted RBP16.87■□□□□ 0.29
UBE4B-206ENST00000466379 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
UBE4B-206ENST00000466379 BEND3Q5T5X7 828 aa16.86■□□□□ 0.29
UBE4B-206ENST00000466379 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
UBE4B-206ENST00000466379 CHMP4AQ9BY43 222 aa16.86■□□□□ 0.29
UBE4B-206ENST00000466379 GSPT1P15170 499 aaKnown RBP16.86■□□□□ 0.29
UBE4B-206ENST00000466379 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
UBE4B-206ENST00000466379 NBR1Q14596 966 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms