RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ESCO1Q5FWF5 840 aa12.83□□□□□ -0.36
UFD1-206ENST00000466373 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
UFD1-206ENST00000466373 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
UFD1-206ENST00000466373 NBPF6Q5VWK0 638 aa12.83□□□□□ -0.36
UFD1-206ENST00000466373 NBPF4Q96M43 638 aa12.83□□□□□ -0.36
UFD1-206ENST00000466373 RABEP1Q15276 862 aa12.82□□□□□ -0.36
UFD1-206ENST00000466373 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
UFD1-206ENST00000466373 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
UFD1-206ENST00000466373 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
UFD1-206ENST00000466373 PSME1Q06323 249 aa12.82□□□□□ -0.36
UFD1-206ENST00000466373 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
UFD1-206ENST00000466373 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
UFD1-206ENST00000466373 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
UFD1-206ENST00000466373 ANXA1P04083 346 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 KCNQ3O43525 872 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 GNAI3P08754 354 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 RILPL2Q969X0 211 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 IL1RAPL2Q9NP60 686 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 XRN1Q8IZH2 1706 aaKnown RBP12.81□□□□□ -0.36
UFD1-206ENST00000466373 ANKARQ7Z5J8 1434 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
UFD1-206ENST00000466373 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 ERC2O15083 957 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 REC8O95072 547 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 PKP1Q13835 747 aa12.8□□□□□ -0.36
UFD1-206ENST00000466373 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
UFD1-206ENST00000466373 MX1P20591 662 aa12.79□□□□□ -0.36
UFD1-206ENST00000466373 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
UFD1-206ENST00000466373 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
UFD1-206ENST00000466373 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
UFD1-206ENST00000466373 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
UFD1-206ENST00000466373 IP6K1Q92551 441 aa12.79□□□□□ -0.36
UFD1-206ENST00000466373 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
UFD1-206ENST00000466373 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
UFD1-206ENST00000466373 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.36
UFD1-206ENST00000466373 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.36
UFD1-206ENST00000466373 ST18O60284 1047 aa12.77□□□□□ -0.37
UFD1-206ENST00000466373 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.37
UFD1-206ENST00000466373 NOL8Q76FK4 1167 aaKnown RBP12.77□□□□□ -0.37
UFD1-206ENST00000466373 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
UFD1-206ENST00000466373 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
UFD1-206ENST00000466373 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
UFD1-206ENST00000466373 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
UFD1-206ENST00000466373 LTN1O94822 1766 aa12.77□□□□□ -0.37
UFD1-206ENST00000466373 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 NBPF7P0C2Y1 421 aaPredicted RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 TEFQ10587 303 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 PPP1R42Q7Z4L9 355 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 ANO2Q9NQ90 1003 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 NEK4P51957 841 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
UFD1-206ENST00000466373 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
UFD1-206ENST00000466373 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
UFD1-206ENST00000466373 GAS2L3Q86XJ1 694 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
UFD1-206ENST00000466373 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 GRPEL1Q9HAV7 217 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 SRGAP3O43295 1099 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 MCTP1Q6DN14 999 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
UFD1-206ENST00000466373 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
UFD1-206ENST00000466373 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
UFD1-206ENST00000466373 MRE11P49959 708 aa12.74□□□□□ -0.37
UFD1-206ENST00000466373 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
UFD1-206ENST00000466373 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
UFD1-206ENST00000466373 CHMLP26374 656 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 IL25Q9H293 177 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
UFD1-206ENST00000466373 RGPD2P0DJD1 1756 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 GCP02774 474 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
UFD1-206ENST00000466373 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
UFD1-206ENST00000466373 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
UFD1-206ENST00000466373 SKOR2Q2VWA4 1001 aaPredicted RBP12.72□□□□□ -0.37
UFD1-206ENST00000466373 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
UFD1-206ENST00000466373 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
UFD1-206ENST00000466373 NUCB2P80303 420 aa12.72□□□□□ -0.37
UFD1-206ENST00000466373 UPF3BQ9BZI7 483 aaKnown RBP12.72□□□□□ -0.37
UFD1-206ENST00000466373 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
UFD1-206ENST00000466373 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
UFD1-206ENST00000466373 C1orf141Q5JVX7 400 aa12.71□□□□□ -0.37
UFD1-206ENST00000466373 NFAT5O94916 1531 aa12.71□□□□□ -0.38
UFD1-206ENST00000466373 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms