RNA–Protein interactions for RNA: ENST00000466121.1

ZNF3-212, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-212ENST00000466121 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
ZNF3-212ENST00000466121 CHL1O00533 1208 aa18.76■□□□□ 0.59
ZNF3-212ENST00000466121 SBF2Q86WG5 1849 aa18.76■□□□□ 0.59
ZNF3-212ENST00000466121 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
ZNF3-212ENST00000466121 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
ZNF3-212ENST00000466121 TSPYL4Q9UJ04 414 aa18.75■□□□□ 0.59
ZNF3-212ENST00000466121 MRC1P22897 1456 aa18.74■□□□□ 0.59
ZNF3-212ENST00000466121 CABP4P57796 275 aa18.74■□□□□ 0.59
ZNF3-212ENST00000466121 RBM6P78332 1123 aaKnown RBP18.74■□□□□ 0.59
ZNF3-212ENST00000466121 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
ZNF3-212ENST00000466121 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
ZNF3-212ENST00000466121 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
ZNF3-212ENST00000466121 KCNQ3O43525 872 aa18.73■□□□□ 0.59
ZNF3-212ENST00000466121 POTEAQ6S8J7 498 aa18.73■□□□□ 0.59
ZNF3-212ENST00000466121 BTBD11A6QL63 1104 aa18.72■□□□□ 0.59
ZNF3-212ENST00000466121 FAM182BQ5T319 152 aa18.72■□□□□ 0.59
ZNF3-212ENST00000466121 ERVV-2B6SEH9 535 aa18.71■□□□□ 0.59
ZNF3-212ENST00000466121 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
ZNF3-212ENST00000466121 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
ZNF3-212ENST00000466121 PAPPAQ13219 1627 aa18.71■□□□□ 0.58
ZNF3-212ENST00000466121 RXRBP28702 533 aa18.7■□□□□ 0.58
ZNF3-212ENST00000466121 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
ZNF3-212ENST00000466121 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
ZNF3-212ENST00000466121 UBR2Q8IWV8 1755 aa18.69■□□□□ 0.58
ZNF3-212ENST00000466121 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
ZNF3-212ENST00000466121 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
ZNF3-212ENST00000466121 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
ZNF3-212ENST00000466121 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
ZNF3-212ENST00000466121 BABAM1Q9NWV8 329 aa18.68■□□□□ 0.58
ZNF3-212ENST00000466121 C5P01031 1676 aa18.68■□□□□ 0.58
ZNF3-212ENST00000466121 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
ZNF3-212ENST00000466121 BTAF1O14981 1849 aa18.66■□□□□ 0.58
ZNF3-212ENST00000466121 PIGBQ92521 554 aa18.66■□□□□ 0.58
ZNF3-212ENST00000466121 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
ZNF3-212ENST00000466121 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
ZNF3-212ENST00000466121 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
ZNF3-212ENST00000466121 CACNA1FO60840 1977 aa18.64■□□□□ 0.58
ZNF3-212ENST00000466121 KCNQ2O43526 872 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 VAMP4O75379 141 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
ZNF3-212ENST00000466121 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
ZNF3-212ENST00000466121 BCL9O00512 1426 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 RGS12O14924 1447 aa18.64■□□□□ 0.57
ZNF3-212ENST00000466121 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
ZNF3-212ENST00000466121 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
ZNF3-212ENST00000466121 PTF1AQ7RTS3 328 aa18.62■□□□□ 0.57
ZNF3-212ENST00000466121 KCPQ6ZWJ8 1503 aa18.61■□□□□ 0.57
ZNF3-212ENST00000466121 TTC5Q8N0Z6 440 aa18.61■□□□□ 0.57
ZNF3-212ENST00000466121 ZNF496Q96IT1 587 aaPredicted RBP18.61■□□□□ 0.57
ZNF3-212ENST00000466121 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
ZNF3-212ENST00000466121 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
ZNF3-212ENST00000466121 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
ZNF3-212ENST00000466121 BCAR3O75815 825 aa18.6■□□□□ 0.57
ZNF3-212ENST00000466121 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
ZNF3-212ENST00000466121 BCL2L13Q9BXK5 485 aa18.6■□□□□ 0.57
ZNF3-212ENST00000466121 PTCD1O75127 700 aaKnown RBP18.59■□□□□ 0.57
ZNF3-212ENST00000466121 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
ZNF3-212ENST00000466121 RARSP54136 660 aaKnown RBP18.59■□□□□ 0.57
ZNF3-212ENST00000466121 SSH1Q8WYL5 1049 aa18.58■□□□□ 0.56
ZNF3-212ENST00000466121 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
ZNF3-212ENST00000466121 HEG1Q9ULI3 1381 aa18.57■□□□□ 0.56
ZNF3-212ENST00000466121 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
ZNF3-212ENST00000466121 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
ZNF3-212ENST00000466121 TJP1Q07157 1748 aa18.57■□□□□ 0.56
ZNF3-212ENST00000466121 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
ZNF3-212ENST00000466121 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
ZNF3-212ENST00000466121 PLIN1O60240 522 aa18.55■□□□□ 0.56
ZNF3-212ENST00000466121 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
ZNF3-212ENST00000466121 LY75O60449 1722 aa18.54■□□□□ 0.56
ZNF3-212ENST00000466121 TRIM37O94972 964 aa18.53■□□□□ 0.56
ZNF3-212ENST00000466121 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
ZNF3-212ENST00000466121 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
ZNF3-212ENST00000466121 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
ZNF3-212ENST00000466121 MRPL50Q8N5N7 158 aaKnown RBP18.53■□□□□ 0.56
ZNF3-212ENST00000466121 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
ZNF3-212ENST00000466121 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
ZNF3-212ENST00000466121 HOXB7P09629 217 aa18.52■□□□□ 0.56
ZNF3-212ENST00000466121 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
ZNF3-212ENST00000466121 SLC4A9Q96Q91 983 aa18.52■□□□□ 0.56
ZNF3-212ENST00000466121 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
ZNF3-212ENST00000466121 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
ZNF3-212ENST00000466121 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
ZNF3-212ENST00000466121 CCDC30Q5VVM6 783 aa18.51■□□□□ 0.55
ZNF3-212ENST00000466121 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
ZNF3-212ENST00000466121 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
ZNF3-212ENST00000466121 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
ZNF3-212ENST00000466121 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
ZNF3-212ENST00000466121 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
ZNF3-212ENST00000466121 COL5A3P25940 1745 aaPredicted RBP18.5■□□□□ 0.55
ZNF3-212ENST00000466121 ANXA1P04083 346 aa18.5■□□□□ 0.55
ZNF3-212ENST00000466121 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
ZNF3-212ENST00000466121 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
ZNF3-212ENST00000466121 MYH14Q7Z406 1995 aaKnown RBP18.5■□□□□ 0.55
ZNF3-212ENST00000466121 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
ZNF3-212ENST00000466121 G2E3Q7L622 706 aa18.49■□□□□ 0.55
ZNF3-212ENST00000466121 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
ZNF3-212ENST00000466121 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
ZNF3-212ENST00000466121 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms