RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
ATG3-203ENST00000465980 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
ATG3-203ENST00000465980 LTN1O94822 1766 aa13.18□□□□□ -0.3
ATG3-203ENST00000465980 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
ATG3-203ENST00000465980 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
ATG3-203ENST00000465980 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
ATG3-203ENST00000465980 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
ATG3-203ENST00000465980 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
ATG3-203ENST00000465980 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
ATG3-203ENST00000465980 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
ATG3-203ENST00000465980 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
ATG3-203ENST00000465980 BAG6P46379 1132 aa13.16□□□□□ -0.3
ATG3-203ENST00000465980 FOSBP53539 338 aa13.16□□□□□ -0.3
ATG3-203ENST00000465980 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
ATG3-203ENST00000465980 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
ATG3-203ENST00000465980 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
ATG3-203ENST00000465980 NFAT5O94916 1531 aa13.15□□□□□ -0.3
ATG3-203ENST00000465980 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
ATG3-203ENST00000465980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATG3-203ENST00000465980 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
ATG3-203ENST00000465980 SBF2Q86WG5 1849 aa13.15□□□□□ -0.3
ATG3-203ENST00000465980 USP54Q70EL1 1684 aa13.15□□□□□ -0.31
ATG3-203ENST00000465980 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
ATG3-203ENST00000465980 CRB1P82279 1406 aa13.14□□□□□ -0.31
ATG3-203ENST00000465980 TRIM37O94972 964 aa13.14□□□□□ -0.31
ATG3-203ENST00000465980 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
ATG3-203ENST00000465980 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
ATG3-203ENST00000465980 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
ATG3-203ENST00000465980 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
ATG3-203ENST00000465980 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
ATG3-203ENST00000465980 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
ATG3-203ENST00000465980 MFSD10Q14728 455 aa13.12□□□□□ -0.31
ATG3-203ENST00000465980 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
ATG3-203ENST00000465980 TOM1L2Q6ZVM7 507 aa13.12□□□□□ -0.31
ATG3-203ENST00000465980 NME9Q86XW9 330 aa13.12□□□□□ -0.31
ATG3-203ENST00000465980 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
ATG3-203ENST00000465980 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
ATG3-203ENST00000465980 PTPREP23469 700 aa13.11□□□□□ -0.31
ATG3-203ENST00000465980 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
ATG3-203ENST00000465980 KCNH5Q8NCM2 988 aa13.11□□□□□ -0.31
ATG3-203ENST00000465980 RREB1Q92766 1687 aa13.11□□□□□ -0.31
ATG3-203ENST00000465980 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 A0A1W2PP64 1363 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 EVI5O60447 810 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
ATG3-203ENST00000465980 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
ATG3-203ENST00000465980 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
ATG3-203ENST00000465980 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
ATG3-203ENST00000465980 APBA3O96018 575 aa13.09□□□□□ -0.31
ATG3-203ENST00000465980 EZH2Q15910 746 aaKnown RBP13.09□□□□□ -0.31
ATG3-203ENST00000465980 TESK2Q96S53 571 aa13.09□□□□□ -0.31
ATG3-203ENST00000465980 TERF2IPQ9NYB0 399 aa13.08□□□□□ -0.32
ATG3-203ENST00000465980 ABCC6O95255 1503 aa13.08□□□□□ -0.32
ATG3-203ENST00000465980 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 USP47Q96K76 1375 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 LRP5O75197 1615 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
ATG3-203ENST00000465980 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
ATG3-203ENST00000465980 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
ATG3-203ENST00000465980 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG3-203ENST00000465980 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
ATG3-203ENST00000465980 DDB1Q16531 1140 aa13.06□□□□□ -0.32
ATG3-203ENST00000465980 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
ATG3-203ENST00000465980 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
ATG3-203ENST00000465980 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
ATG3-203ENST00000465980 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
ATG3-203ENST00000465980 MYOM1P52179 1685 aa13.04□□□□□ -0.32
ATG3-203ENST00000465980 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
ATG3-203ENST00000465980 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
ATG3-203ENST00000465980 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
ATG3-203ENST00000465980 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
ATG3-203ENST00000465980 HSPA5P11021 654 aaKnown RBP13.03□□□□□ -0.32
ATG3-203ENST00000465980 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
ATG3-203ENST00000465980 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
ATG3-203ENST00000465980 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.33
ATG3-203ENST00000465980 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
ATG3-203ENST00000465980 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
ATG3-203ENST00000465980 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
ATG3-203ENST00000465980 TMF1P82094 1093 aa13.01□□□□□ -0.33
ATG3-203ENST00000465980 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
ATG3-203ENST00000465980 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
ATG3-203ENST00000465980 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
ATG3-203ENST00000465980 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
ATG3-203ENST00000465980 ADAM33Q9BZ11 813 aa13.01□□□□□ -0.33
ATG3-203ENST00000465980 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
ATG3-203ENST00000465980 COG3Q96JB2 828 aa13□□□□□ -0.33
ATG3-203ENST00000465980 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
ATG3-203ENST00000465980 EXOC5O00471 708 aa12.99□□□□□ -0.33
ATG3-203ENST00000465980 FBLN1P23142 703 aa12.99□□□□□ -0.33
ATG3-203ENST00000465980 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
ATG3-203ENST00000465980 BTAF1O14981 1849 aa12.99□□□□□ -0.33
ATG3-203ENST00000465980 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms