RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 HMGB2P26583 209 aaKnown RBP14.32□□□□□ -0.12
GPNMB-206ENST00000465673 IFNL2Q8IZJ0 200 aa14.32□□□□□ -0.12
GPNMB-206ENST00000465673 A0A0G2JLW4 131 aa14.31□□□□□ -0.12
GPNMB-206ENST00000465673 EIF4A2Q14240 407 aaKnown RBP14.31□□□□□ -0.12
GPNMB-206ENST00000465673 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
GPNMB-206ENST00000465673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
GPNMB-206ENST00000465673 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
GPNMB-206ENST00000465673 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
GPNMB-206ENST00000465673 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
GPNMB-206ENST00000465673 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
GPNMB-206ENST00000465673 KDRP35968 1356 aa14.28□□□□□ -0.12
GPNMB-206ENST00000465673 TRAPPC3LQ5T215 181 aa14.28□□□□□ -0.12
GPNMB-206ENST00000465673 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
GPNMB-206ENST00000465673 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
GPNMB-206ENST00000465673 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.12
GPNMB-206ENST00000465673 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.12
GPNMB-206ENST00000465673 DPEP1P16444 411 aa14.27□□□□□ -0.13
GPNMB-206ENST00000465673 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.13
GPNMB-206ENST00000465673 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.13
GPNMB-206ENST00000465673 GYS1P13807 737 aa14.26□□□□□ -0.13
GPNMB-206ENST00000465673 TGFB2P61812 414 aa14.25□□□□□ -0.13
GPNMB-206ENST00000465673 NLGN1Q8N2Q7 840 aa14.25□□□□□ -0.13
GPNMB-206ENST00000465673 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
GPNMB-206ENST00000465673 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 ERVV-2B6SEH9 535 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
GPNMB-206ENST00000465673 FCHSD2O94868 740 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 KCNA3P22001 575 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 RFC4P35249 363 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
GPNMB-206ENST00000465673 SRP68Q9UHB9 627 aaKnown RBP14.24□□□□□ -0.13
GPNMB-206ENST00000465673 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
GPNMB-206ENST00000465673 KIF13BQ9NQT8 1826 aa14.23□□□□□ -0.13
GPNMB-206ENST00000465673 RPS6KA4O75676 772 aa14.23□□□□□ -0.13
GPNMB-206ENST00000465673 CABP4P57796 275 aa14.23□□□□□ -0.13
GPNMB-206ENST00000465673 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
GPNMB-206ENST00000465673 ZNF530Q6P9A1 599 aaPredicted RBP14.23□□□□□ -0.13
GPNMB-206ENST00000465673 CCDC87Q9NVE4 849 aa14.23□□□□□ -0.13
GPNMB-206ENST00000465673 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-206ENST00000465673 DCAF5Q96JK2 942 aa14.22□□□□□ -0.13
GPNMB-206ENST00000465673 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
GPNMB-206ENST00000465673 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
GPNMB-206ENST00000465673 CNTNAP4Q9C0A0 1308 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 TOMM70O94826 608 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 ADRA2BP18089 450 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 HTRA3P83110 453 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 FKBP8Q14318 412 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 C9orf131Q5VYM1 1079 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 DNAJC5GQ8N7S2 189 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 PANK3Q9H999 370 aa14.21□□□□□ -0.13
GPNMB-206ENST00000465673 C4AP0C0L4 1744 aa14.21□□□□□ -0.14
GPNMB-206ENST00000465673 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
GPNMB-206ENST00000465673 CRKLP46109 303 aaKnown RBP14.2□□□□□ -0.14
GPNMB-206ENST00000465673 MTHFSP49914 203 aa14.2□□□□□ -0.14
GPNMB-206ENST00000465673 DDR1Q08345 913 aa14.2□□□□□ -0.14
GPNMB-206ENST00000465673 COL5A3P25940 1745 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-206ENST00000465673 CHRNA5P30532 468 aa14.19□□□□□ -0.14
GPNMB-206ENST00000465673 APLP1P51693 650 aa14.19□□□□□ -0.14
GPNMB-206ENST00000465673 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-206ENST00000465673 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
GPNMB-206ENST00000465673 AMOTQ4VCS5 1084 aa14.17□□□□□ -0.14
GPNMB-206ENST00000465673 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
GPNMB-206ENST00000465673 INTS5Q6P9B9 1019 aaKnown RBP14.17□□□□□ -0.14
GPNMB-206ENST00000465673 PIM2Q9P1W9 311 aa14.17□□□□□ -0.14
GPNMB-206ENST00000465673 USP42Q9H9J4 1324 aaKnown RBP14.16□□□□□ -0.14
GPNMB-206ENST00000465673 BRCA1P38398 1863 aaKnown RBP14.16□□□□□ -0.14
GPNMB-206ENST00000465673 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
GPNMB-206ENST00000465673 C1orf141Q5JVX7 400 aa14.16□□□□□ -0.14
GPNMB-206ENST00000465673 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
GPNMB-206ENST00000465673 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
GPNMB-206ENST00000465673 DNAJC10Q8IXB1 793 aa14.15□□□□□ -0.14
GPNMB-206ENST00000465673 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
GPNMB-206ENST00000465673 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
GPNMB-206ENST00000465673 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
GPNMB-206ENST00000465673 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
GPNMB-206ENST00000465673 TM4SF1P30408 202 aa14.14□□□□□ -0.15
GPNMB-206ENST00000465673 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
GPNMB-206ENST00000465673 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
GPNMB-206ENST00000465673 LGR6Q9HBX8 967 aa14.14□□□□□ -0.15
GPNMB-206ENST00000465673 TJP1Q07157 1748 aa14.13□□□□□ -0.15
GPNMB-206ENST00000465673 IL13P35225 146 aa14.13□□□□□ -0.15
GPNMB-206ENST00000465673 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
GPNMB-206ENST00000465673 USPL1Q5W0Q7 1092 aa14.13□□□□□ -0.15
GPNMB-206ENST00000465673 RBM46Q8TBY0 533 aaKnown RBP14.13□□□□□ -0.15
GPNMB-206ENST00000465673 RASSF7Q02833 373 aa14.12□□□□□ -0.15
GPNMB-206ENST00000465673 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-206ENST00000465673 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
GPNMB-206ENST00000465673 ADAMTS7Q9UKP4 1686 aa14.11□□□□□ -0.15
GPNMB-206ENST00000465673 ARFGEF1Q9Y6D6 1849 aa14.11□□□□□ -0.15
GPNMB-206ENST00000465673 PRELPP51888 382 aa14.11□□□□□ -0.15
GPNMB-206ENST00000465673 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.15
GPNMB-206ENST00000465673 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-206ENST00000465673 ZPR1O75312 459 aa14.1□□□□□ -0.15
GPNMB-206ENST00000465673 HMOX1P09601 288 aa14.1□□□□□ -0.15
GPNMB-206ENST00000465673 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-206ENST00000465673 NFIXQ14938 502 aa14.1□□□□□ -0.15
GPNMB-206ENST00000465673 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
GPNMB-206ENST00000465673 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
GPNMB-206ENST00000465673 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms