RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 FCHSD2O94868 740 aa10.35□□□□□ -0.75
THBS3-205ENST00000465596 MPRIPQ6WCQ1 1025 aa10.35□□□□□ -0.75
THBS3-205ENST00000465596 LGR6Q9HBX8 967 aa10.35□□□□□ -0.75
THBS3-205ENST00000465596 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
THBS3-205ENST00000465596 KIF13BQ9NQT8 1826 aa10.35□□□□□ -0.75
THBS3-205ENST00000465596 KIAA1551Q9HCM1 1747 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
THBS3-205ENST00000465596 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
THBS3-205ENST00000465596 KCNQ4P56696 695 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
THBS3-205ENST00000465596 CCDC184Q52MB2 194 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
THBS3-205ENST00000465596 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
THBS3-205ENST00000465596 ATG3Q9NT62 314 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
THBS3-205ENST00000465596 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
THBS3-205ENST00000465596 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
THBS3-205ENST00000465596 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
THBS3-205ENST00000465596 AMIGO3Q86WK7 504 aa10.33□□□□□ -0.76
THBS3-205ENST00000465596 ITPK1Q13572 414 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 SLC15A2Q16348 729 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 C1orf141Q5JVX7 400 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 SLC52A2Q9HAB3 445 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 TMOD3Q9NYL9 352 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 NUDCQ9Y266 331 aa10.32□□□□□ -0.76
THBS3-205ENST00000465596 AFDNP55196 1824 aaKnown RBP10.32□□□□□ -0.76
THBS3-205ENST00000465596 NFATC2IPQ8NCF5 419 aa10.31□□□□□ -0.76
THBS3-205ENST00000465596 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
THBS3-205ENST00000465596 BRCA1P38398 1863 aaKnown RBP10.31□□□□□ -0.76
THBS3-205ENST00000465596 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
THBS3-205ENST00000465596 NRXN2Q9P2S2 1712 aa10.3□□□□□ -0.76
THBS3-205ENST00000465596 LOC102724428A0A0B4J2F2 783 aa10.3□□□□□ -0.76
THBS3-205ENST00000465596 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
THBS3-205ENST00000465596 SIK1P57059 783 aa10.3□□□□□ -0.76
THBS3-205ENST00000465596 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
THBS3-205ENST00000465596 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
THBS3-205ENST00000465596 CCNL1Q9UK58 526 aaPredicted RBP10.3□□□□□ -0.76
THBS3-205ENST00000465596 CABP4P57796 275 aa10.29□□□□□ -0.76
THBS3-205ENST00000465596 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
THBS3-205ENST00000465596 NUP98P52948 1817 aa10.28□□□□□ -0.76
THBS3-205ENST00000465596 HEG1Q9ULI3 1381 aa10.27□□□□□ -0.76
THBS3-205ENST00000465596 HTATSF1O43719 755 aaKnown RBP10.27□□□□□ -0.77
THBS3-205ENST00000465596 PTGER2P43116 358 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 NFE2L2Q16236 605 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 NBPF14Q5TI25 921 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 STK32BQ9NY57 414 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 CNTNAP4Q9C0A0 1308 aa10.27□□□□□ -0.77
THBS3-205ENST00000465596 ANKRD36CQ5JPF3 1778 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 ANKRD31Q8N7Z5 1873 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 DCTN1Q14203 1278 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 MCM10Q7L590 875 aa10.26□□□□□ -0.77
THBS3-205ENST00000465596 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
THBS3-205ENST00000465596 KCNQ3O43525 872 aa10.25□□□□□ -0.77
THBS3-205ENST00000465596 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
THBS3-205ENST00000465596 SMIM5Q71RC9 77 aa10.25□□□□□ -0.77
THBS3-205ENST00000465596 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
THBS3-205ENST00000465596 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
THBS3-205ENST00000465596 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
THBS3-205ENST00000465596 ZNF790Q6PG37 636 aa10.24□□□□□ -0.77
THBS3-205ENST00000465596 COL23A1Q86Y22 540 aaPredicted RBP10.24□□□□□ -0.77
THBS3-205ENST00000465596 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
THBS3-205ENST00000465596 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
THBS3-205ENST00000465596 THUMPD2Q9BTF0 503 aaKnown RBP10.24□□□□□ -0.77
THBS3-205ENST00000465596 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
THBS3-205ENST00000465596 N4BP2Q86UW6 1770 aaPredicted RBP10.24□□□□□ -0.77
THBS3-205ENST00000465596 CYP19A1P11511 503 aaPredicted RBP10.23□□□□□ -0.77
THBS3-205ENST00000465596 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
THBS3-205ENST00000465596 INTS5Q6P9B9 1019 aaKnown RBP10.23□□□□□ -0.77
THBS3-205ENST00000465596 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
THBS3-205ENST00000465596 RUNDC1Q96C34 613 aa10.23□□□□□ -0.77
THBS3-205ENST00000465596 COL11A2P13942 1736 aaPredicted RBP10.22□□□□□ -0.77
THBS3-205ENST00000465596 ZBTB7AO95365 584 aa10.22□□□□□ -0.77
THBS3-205ENST00000465596 SSFA2P28290 1259 aa10.22□□□□□ -0.77
THBS3-205ENST00000465596 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
THBS3-205ENST00000465596 TEFQ10587 303 aa10.22□□□□□ -0.77
THBS3-205ENST00000465596 DNAJC10Q8IXB1 793 aa10.22□□□□□ -0.77
THBS3-205ENST00000465596 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
THBS3-205ENST00000465596 MTFR1LQ9H019 292 aa10.22□□□□□ -0.77
THBS3-205ENST00000465596 CHD4Q14839 1912 aa10.21□□□□□ -0.77
THBS3-205ENST00000465596 ANP32CO43423 234 aa10.21□□□□□ -0.77
THBS3-205ENST00000465596 WDR43Q15061 677 aaKnown RBP eCLIP10.21□□□□□ -0.77
THBS3-205ENST00000465596 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
THBS3-205ENST00000465596 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.77
THBS3-205ENST00000465596 SOS1Q07889 1333 aaPredicted RBP10.21□□□□□ -0.78
THBS3-205ENST00000465596 MAPK8IP3Q9UPT6 1336 aa10.21□□□□□ -0.78
THBS3-205ENST00000465596 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.78
THBS3-205ENST00000465596 ARFGEF1Q9Y6D6 1849 aa10.21□□□□□ -0.78
THBS3-205ENST00000465596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.2□□□□□ -0.78
THBS3-205ENST00000465596 PRAMEF22A3QJZ6 481 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 BTBD11A6QL63 1104 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 GNPATO15228 680 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 RPS6KA4O75676 772 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 CACNA1SQ13698 1873 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
THBS3-205ENST00000465596 SPON1Q9HCB6 807 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms