RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 ERVV-2B6SEH9 535 aa23.24■■□□□ 1.31
TOM1-213ENST00000465529 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
TOM1-213ENST00000465529 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
TOM1-213ENST00000465529 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
TOM1-213ENST00000465529 KLHL34Q8N239 644 aa23.24■■□□□ 1.31
TOM1-213ENST00000465529 AK7Q96M32 723 aa23.24■■□□□ 1.31
TOM1-213ENST00000465529 SLC4A9Q96Q91 983 aa23.24■■□□□ 1.31
TOM1-213ENST00000465529 PHF14O94880 888 aa23.23■■□□□ 1.31
TOM1-213ENST00000465529 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
TOM1-213ENST00000465529 POLD1P28340 1107 aa23.22■■□□□ 1.31
TOM1-213ENST00000465529 CABP4P57796 275 aa23.22■■□□□ 1.31
TOM1-213ENST00000465529 RBM42Q9BTD8 480 aaKnown RBP23.21■■□□□ 1.31
TOM1-213ENST00000465529 COL5A3P25940 1745 aaPredicted RBP23.21■■□□□ 1.31
TOM1-213ENST00000465529 NFATC2IPQ8NCF5 419 aa23.19■■□□□ 1.3
TOM1-213ENST00000465529 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
TOM1-213ENST00000465529 MAP3K5Q99683 1374 aa23.18■■□□□ 1.3
TOM1-213ENST00000465529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.18■■□□□ 1.3
TOM1-213ENST00000465529 U2SURPO15042 1029 aaKnown RBP23.18■■□□□ 1.3
TOM1-213ENST00000465529 MTHFSDQ2M296 383 aaKnown RBP23.18■■□□□ 1.3
TOM1-213ENST00000465529 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
TOM1-213ENST00000465529 GNPATO15228 680 aa23.17■■□□□ 1.3
TOM1-213ENST00000465529 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
TOM1-213ENST00000465529 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
TOM1-213ENST00000465529 NLGN2Q8NFZ4 835 aa23.16■■□□□ 1.3
TOM1-213ENST00000465529 TJP1Q07157 1748 aa23.16■■□□□ 1.3
TOM1-213ENST00000465529 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
TOM1-213ENST00000465529 DCAF8L1A6NGE4 600 aa23.15■■□□□ 1.3
TOM1-213ENST00000465529 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
TOM1-213ENST00000465529 ADAMTS7Q9UKP4 1686 aa23.15■■□□□ 1.3
TOM1-213ENST00000465529 UTRNP46939 3433 aa23.13■■□□□ 1.29
TOM1-213ENST00000465529 MRC1P22897 1456 aa23.13■■□□□ 1.29
TOM1-213ENST00000465529 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
TOM1-213ENST00000465529 YY1P25490 414 aa23.13■■□□□ 1.29
TOM1-213ENST00000465529 SSFA2P28290 1259 aa23.13■■□□□ 1.29
TOM1-213ENST00000465529 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
TOM1-213ENST00000465529 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
TOM1-213ENST00000465529 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
TOM1-213ENST00000465529 SLC39A6Q13433 755 aa23.1■■□□□ 1.29
TOM1-213ENST00000465529 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
TOM1-213ENST00000465529 CICQ96RK0 1608 aaPredicted RBP23.08■■□□□ 1.29
TOM1-213ENST00000465529 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.28
TOM1-213ENST00000465529 PELP1Q8IZL8 1130 aaKnown RBP23.07■■□□□ 1.28
TOM1-213ENST00000465529 CFAP53Q96M91 514 aa23.07■■□□□ 1.28
TOM1-213ENST00000465529 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
TOM1-213ENST00000465529 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
TOM1-213ENST00000465529 PHACTR3Q96KR7 559 aa23.06■■□□□ 1.28
TOM1-213ENST00000465529 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
TOM1-213ENST00000465529 CHD4Q14839 1912 aa23.06■■□□□ 1.28
TOM1-213ENST00000465529 SIPA1L3O60292 1781 aaPredicted RBP23.05■■□□□ 1.28
TOM1-213ENST00000465529 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
TOM1-213ENST00000465529 CRKLP46109 303 aaKnown RBP23.05■■□□□ 1.28
TOM1-213ENST00000465529 GPR162Q16538 588 aa23.05■■□□□ 1.28
TOM1-213ENST00000465529 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
TOM1-213ENST00000465529 ARHGEF1Q92888 912 aaKnown RBP23.05■■□□□ 1.28
TOM1-213ENST00000465529 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
TOM1-213ENST00000465529 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
TOM1-213ENST00000465529 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
TOM1-213ENST00000465529 GOLGB1Q14789 3259 aaKnown RBP23.04■■□□□ 1.28
TOM1-213ENST00000465529 RPS6KA4O75676 772 aa23.03■■□□□ 1.28
TOM1-213ENST00000465529 U2AF1L5P0DN76 240 aaPredicted RBP23.02■■□□□ 1.28
TOM1-213ENST00000465529 U2AF1Q01081 240 aaKnown RBP eCLIP23.02■■□□□ 1.28
TOM1-213ENST00000465529 IL17REQ8NFR9 667 aa23.02■■□□□ 1.28
TOM1-213ENST00000465529 GAS2L2Q8NHY3 880 aa23.02■■□□□ 1.28
TOM1-213ENST00000465529 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
TOM1-213ENST00000465529 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
TOM1-213ENST00000465529 MMP10P09238 476 aa23■■□□□ 1.27
TOM1-213ENST00000465529 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
TOM1-213ENST00000465529 NUDCQ9Y266 331 aa23■■□□□ 1.27
TOM1-213ENST00000465529 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
TOM1-213ENST00000465529 SRP68Q9UHB9 627 aaKnown RBP22.99■■□□□ 1.27
TOM1-213ENST00000465529 CD2APQ9Y5K6 639 aa22.99■■□□□ 1.27
TOM1-213ENST00000465529 GYS1P13807 737 aa22.98■■□□□ 1.27
TOM1-213ENST00000465529 ADRA2BP18089 450 aa22.98■■□□□ 1.27
TOM1-213ENST00000465529 RFC4P35249 363 aa22.98■■□□□ 1.27
TOM1-213ENST00000465529 CYP19A1P11511 503 aaPredicted RBP22.96■■□□□ 1.27
TOM1-213ENST00000465529 KIAA1551Q9HCM1 1747 aa22.96■■□□□ 1.27
TOM1-213ENST00000465529 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
TOM1-213ENST00000465529 TEFQ10587 303 aa22.95■■□□□ 1.26
TOM1-213ENST00000465529 CCDC87Q9NVE4 849 aa22.95■■□□□ 1.26
TOM1-213ENST00000465529 N4BP2Q86UW6 1770 aaPredicted RBP22.94■■□□□ 1.26
TOM1-213ENST00000465529 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
TOM1-213ENST00000465529 ZBTB1Q9Y2K1 713 aa22.94■■□□□ 1.26
TOM1-213ENST00000465529 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
TOM1-213ENST00000465529 USP42Q9H9J4 1324 aaKnown RBP22.93■■□□□ 1.26
TOM1-213ENST00000465529 KCNQ3O43525 872 aa22.93■■□□□ 1.26
TOM1-213ENST00000465529 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
TOM1-213ENST00000465529 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
TOM1-213ENST00000465529 NLGN1Q8N2Q7 840 aa22.93■■□□□ 1.26
TOM1-213ENST00000465529 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
TOM1-213ENST00000465529 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
TOM1-213ENST00000465529 FCHSD2O94868 740 aa22.92■■□□□ 1.26
TOM1-213ENST00000465529 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
TOM1-213ENST00000465529 FKBP8Q14318 412 aa22.92■■□□□ 1.26
TOM1-213ENST00000465529 MCM10Q7L590 875 aa22.92■■□□□ 1.26
TOM1-213ENST00000465529 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
TOM1-213ENST00000465529 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
TOM1-213ENST00000465529 ZNF784Q8NCA9 323 aaPredicted RBP22.9■■□□□ 1.26
TOM1-213ENST00000465529 PXDNLA1KZ92 1463 aa22.9■■□□□ 1.26
TOM1-213ENST00000465529 C10orf71Q711Q0 1435 aa22.9■■□□□ 1.26
TOM1-213ENST00000465529 COL15A1P39059 1388 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms