RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 TIMELESSQ9UNS1 1208 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 SRPRBQ9Y5M8 271 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 ACTN1P12814 892 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 EPS15P42566 896 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 E2F4Q16254 413 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 TPD52L1Q16890 204 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 DCAF15Q66K64 600 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 CCDC94Q9BW85 323 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 CARD11Q9BXL7 1154 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 OXCT2Q9BYC2 517 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 PICK1Q9NRD5 415 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 SREBF2Q12772 1141 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 WASHC4Q2M389 1173 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 RNF20Q5VTR2 975 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 ZSCAN29Q8IWY8 852 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 CCDC146Q8IYE0 955 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 C2orf69Q8N8R5 385 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 SYAP1Q96A49 352 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 RTN4Q9NQC3 1192 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 FAM177BA6PVY3 158 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 PPP1R12BO60237 982 aaPredicted RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 IFIT2P09913 472 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 PLCG2P16885 1265 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 USP5P45974 858 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 KIF11P52732 1056 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 CAVIN4Q5BKX8 364 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 TRMT44Q8IYL2 757 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 RETREG2Q8NC44 543 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 NAP1L4Q99733 375 aaKnown RBP4.48□□□□□ -1.69
SP3-205ENST00000465379 KDM2AQ9Y2K7 1162 aa4.48□□□□□ -1.69
SP3-205ENST00000465379 EFCAB5A4FU69 1503 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 COPB2P35606 906 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 EXOSC10Q01780 885 aaKnown RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 CEP112Q8N8E3 955 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 HINFPQ9BQA5 517 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 SPON1Q9HCB6 807 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 LAS1LQ9Y4W2 734 aaKnown RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 SNAPC4Q5SXM2 1469 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 SENP3-EIF4A1A0A087X0R7 540 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 OSBPP22059 807 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 DPYDQ12882 1025 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 NFE2L2Q16236 605 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 NCAPGQ9BPX3 1015 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 WDR70Q9NW82 654 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 MAP3K20Q9NYL2 800 aaKnown RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 GJA3Q9Y6H8 435 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 CBX1P83916 185 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 SKA1Q96BD8 255 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 GDPD2Q9HCC8 539 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 STRN4Q9NRL3 753 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 ARHGEF10O15013 1369 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 EZRP15311 586 aaKnown RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 MSANTD4Q8NCY6 345 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 DDX12PQ92771 950 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 DNAJC5Q9H3Z4 198 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 GPBP1L1Q9HC44 474 aaPredicted RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 ABT1Q9ULW3 272 aaKnown RBP4.47□□□□□ -1.69
SP3-205ENST00000465379 SLC8A2Q9UPR5 921 aa4.47□□□□□ -1.69
SP3-205ENST00000465379 ANKRD62A6NC57 917 aa4.46□□□□□ -1.69
SP3-205ENST00000465379 PRKAR2AP13861 404 aaKnown RBP4.46□□□□□ -1.69
SP3-205ENST00000465379 RBM25P49756 843 aaKnown RBP4.46□□□□□ -1.69
SP3-205ENST00000465379 SLC4A8Q2Y0W8 1093 aa4.46□□□□□ -1.69
SP3-205ENST00000465379 USP48Q86UV5 1035 aa4.46□□□□□ -1.69
SP3-205ENST00000465379 ELMOD1Q8N336 334 aa4.46□□□□□ -1.69
SP3-205ENST00000465379 CDC5LQ99459 802 aaKnown RBP4.46□□□□□ -1.69
SP3-205ENST00000465379 BMP2KQ9NSY1 1161 aaPredicted RBP4.46□□□□□ -1.69
SP3-205ENST00000465379 ERICH4A6NGS2 130 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 GTF2F1P35269 517 aaKnown RBP eCLIP4.46□□□□□ -1.7
SP3-205ENST00000465379 MMP14P50281 582 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 AMOTQ4VCS5 1084 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 FAM196AQ6ZSG2 479 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 DDX46Q7L014 1031 aaKnown RBP4.46□□□□□ -1.7
SP3-205ENST00000465379 NIM1KQ8IY84 436 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 ERC2O15083 957 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 DAPK3O43293 454 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 SDHBP21912 280 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
SP3-205ENST00000465379 CNGB1Q14028 1251 aaPredicted RBP4.46□□□□□ -1.7
SP3-205ENST00000465379 PRAM1Q96QH2 718 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 MYD88Q99836 296 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 VEZTQ9HBM0 779 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 PNMA3Q9UL41 463 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.46□□□□□ -1.7
SP3-205ENST00000465379 SSUH2Q9Y2M2 353 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 CSADQ9Y600 493 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 ARHGAP5Q13017 1502 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 KLHL41O60662 606 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 PTCD1O75127 700 aaKnown RBP4.46□□□□□ -1.7
SP3-205ENST00000465379 ALDH1B1P30837 517 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 ARID5AQ03989 594 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 CCDC102AQ96A19 550 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 LGR6Q9HBX8 967 aa4.46□□□□□ -1.7
SP3-205ENST00000465379 ZNF76P36508 570 aa4.45□□□□□ -1.7
SP3-205ENST00000465379 HNRNPH2P55795 449 aaKnown RBP4.45□□□□□ -1.7
SP3-205ENST00000465379 MRPS9P82933 396 aaKnown RBP4.45□□□□□ -1.7
SP3-205ENST00000465379 EXOC8Q8IYI6 725 aa4.45□□□□□ -1.7
SP3-205ENST00000465379 CCDC12Q8WUD4 166 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms