RNA–Protein interactions for RNA: ENST00000465292.5

KCNS3-204, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

TSL 4

Gene KCNS3, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-204ENST00000465292 LINC00116Q8NCU8 138 aa29.35■■■□□ 2.29
KCNS3-204ENST00000465292 ITPK1Q13572 414 aa29.34■■■□□ 2.29
KCNS3-204ENST00000465292 SMIM5Q71RC9 77 aa29.34■■■□□ 2.29
KCNS3-204ENST00000465292 KDM6AO15550 1401 aaPredicted RBP29.34■■■□□ 2.29
KCNS3-204ENST00000465292 PHF14O94880 888 aa29.33■■■□□ 2.29
KCNS3-204ENST00000465292 RBM42Q9BTD8 480 aaKnown RBP29.33■■■□□ 2.29
KCNS3-204ENST00000465292 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
KCNS3-204ENST00000465292 TAF1LQ8IZX4 1826 aa29.31■■■□□ 2.28
KCNS3-204ENST00000465292 C4BP0C0L5 1744 aa29.31■■■□□ 2.28
KCNS3-204ENST00000465292 NFATC2IPQ8NCF5 419 aa29.3■■■□□ 2.28
KCNS3-204ENST00000465292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.29■■■□□ 2.28
KCNS3-204ENST00000465292 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
KCNS3-204ENST00000465292 U2SURPO15042 1029 aaKnown RBP29.28■■■□□ 2.28
KCNS3-204ENST00000465292 YY1P25490 414 aa29.28■■■□□ 2.28
KCNS3-204ENST00000465292 MAP3K5Q99683 1374 aa29.27■■■□□ 2.28
KCNS3-204ENST00000465292 GNPATO15228 680 aa29.27■■■□□ 2.28
KCNS3-204ENST00000465292 SLC4A9Q96Q91 983 aa29.27■■■□□ 2.28
KCNS3-204ENST00000465292 PTCD1O75127 700 aaKnown RBP29.25■■■□□ 2.27
KCNS3-204ENST00000465292 SSFA2P28290 1259 aa29.25■■■□□ 2.27
KCNS3-204ENST00000465292 MTHFSDQ2M296 383 aaKnown RBP29.25■■■□□ 2.27
KCNS3-204ENST00000465292 LGR6Q9HBX8 967 aa29.25■■■□□ 2.27
KCNS3-204ENST00000465292 COL24A1Q17RW2 1714 aa29.24■■■□□ 2.27
KCNS3-204ENST00000465292 NLGN2Q8NFZ4 835 aa29.21■■■□□ 2.27
KCNS3-204ENST00000465292 CFAP53Q96M91 514 aa29.21■■■□□ 2.27
KCNS3-204ENST00000465292 RNMTO43148 476 aaKnown RBP29.2■■■□□ 2.26
KCNS3-204ENST00000465292 GPR162Q16538 588 aa29.2■■■□□ 2.26
KCNS3-204ENST00000465292 COL3A1P02461 1466 aaPredicted RBP29.2■■■□□ 2.26
KCNS3-204ENST00000465292 SLC52A2Q9HAB3 445 aa29.19■■■□□ 2.26
KCNS3-204ENST00000465292 RTCBQ9Y3I0 505 aaKnown RBP29.19■■■□□ 2.26
KCNS3-204ENST00000465292 UBR3Q6ZT12 1888 aa29.19■■■□□ 2.26
KCNS3-204ENST00000465292 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
KCNS3-204ENST00000465292 PPP2R1AP30153 589 aa29.17■■■□□ 2.26
KCNS3-204ENST00000465292 TRAPPC3LQ5T215 181 aa29.17■■■□□ 2.26
KCNS3-204ENST00000465292 RC3H1Q5TC82 1133 aaKnown RBP29.17■■■□□ 2.26
KCNS3-204ENST00000465292 CNTNAP4Q9C0A0 1308 aa29.14■■■□□ 2.25
KCNS3-204ENST00000465292 SLC39A6Q13433 755 aa29.13■■■□□ 2.25
KCNS3-204ENST00000465292 NUDCQ9Y266 331 aa29.13■■■□□ 2.25
KCNS3-204ENST00000465292 SCN11AQ9UI33 1791 aa29.13■■■□□ 2.25
KCNS3-204ENST00000465292 RPS6KA4O75676 772 aa29.12■■■□□ 2.25
KCNS3-204ENST00000465292 ARHGEF1Q92888 912 aaKnown RBP29.12■■■□□ 2.25
KCNS3-204ENST00000465292 CD2APQ9Y5K6 639 aa29.11■■■□□ 2.25
KCNS3-204ENST00000465292 UTRNP46939 3433 aa29.1■■■□□ 2.25
KCNS3-204ENST00000465292 ZNF831Q5JPB2 1677 aa29.1■■■□□ 2.25
KCNS3-204ENST00000465292 CRKLP46109 303 aaKnown RBP29.1■■■□□ 2.25
KCNS3-204ENST00000465292 GAS2L2Q8NHY3 880 aa29.1■■■□□ 2.25
KCNS3-204ENST00000465292 ADRA2BP18089 450 aa29.09■■■□□ 2.25
KCNS3-204ENST00000465292 PRKAR2BP31323 418 aa29.09■■■□□ 2.25
KCNS3-204ENST00000465292 RFC4P35249 363 aa29.09■■■□□ 2.25
KCNS3-204ENST00000465292 GNAT3A8MTJ3 354 aa29.08■■■□□ 2.25
KCNS3-204ENST00000465292 U2AF1L5P0DN76 240 aaPredicted RBP29.08■■■□□ 2.25
KCNS3-204ENST00000465292 U2AF1Q01081 240 aaKnown RBP eCLIP29.08■■■□□ 2.25
KCNS3-204ENST00000465292 DNAJC10Q8IXB1 793 aa29.07■■■□□ 2.24
KCNS3-204ENST00000465292 PHACTR3Q96KR7 559 aa29.07■■■□□ 2.24
KCNS3-204ENST00000465292 MMP10P09238 476 aa29.06■■■□□ 2.24
KCNS3-204ENST00000465292 NLGN1Q8N2Q7 840 aa29.06■■■□□ 2.24
KCNS3-204ENST00000465292 IL17REQ8NFR9 667 aa29.06■■■□□ 2.24
KCNS3-204ENST00000465292 RSPH6AQ9H0K4 717 aa29.06■■■□□ 2.24
KCNS3-204ENST00000465292 COL5A3P25940 1745 aaPredicted RBP29.05■■■□□ 2.24
KCNS3-204ENST00000465292 MRC1P22897 1456 aa29.04■■■□□ 2.24
KCNS3-204ENST00000465292 TEFQ10587 303 aa29.04■■■□□ 2.24
KCNS3-204ENST00000465292 INTS5Q6P9B9 1019 aaKnown RBP29.03■■■□□ 2.24
KCNS3-204ENST00000465292 GYS1P13807 737 aa29.02■■■□□ 2.24
KCNS3-204ENST00000465292 YBX3P16989 372 aaKnown RBP eCLIP29.02■■■□□ 2.24
KCNS3-204ENST00000465292 TTC5Q8N0Z6 440 aa29.01■■■□□ 2.23
KCNS3-204ENST00000465292 CCDC87Q9NVE4 849 aa29.01■■■□□ 2.23
KCNS3-204ENST00000465292 MYH14Q7Z406 1995 aaKnown RBP29.01■■■□□ 2.23
KCNS3-204ENST00000465292 FCHSD2O94868 740 aa29■■■□□ 2.23
KCNS3-204ENST00000465292 CYP19A1P11511 503 aaPredicted RBP29■■■□□ 2.23
KCNS3-204ENST00000465292 ADAMTS7Q9UKP4 1686 aa28.99■■■□□ 2.23
KCNS3-204ENST00000465292 GRIN3BO60391 1043 aa28.99■■■□□ 2.23
KCNS3-204ENST00000465292 SRP68Q9UHB9 627 aaKnown RBP28.99■■■□□ 2.23
KCNS3-204ENST00000465292 TJP1Q07157 1748 aa28.99■■■□□ 2.23
KCNS3-204ENST00000465292 GOLGB1Q14789 3259 aaKnown RBP28.97■■■□□ 2.23
KCNS3-204ENST00000465292 VSIG10Q8N0Z9 540 aa28.97■■■□□ 2.23
KCNS3-204ENST00000465292 WWC3Q9ULE0 1092 aa28.97■■■□□ 2.23
KCNS3-204ENST00000465292 VIRMAQ69YN4 1812 aaKnown RBP28.97■■■□□ 2.23
KCNS3-204ENST00000465292 KCPQ6ZWJ8 1503 aa28.96■■■□□ 2.23
KCNS3-204ENST00000465292 PARP3Q9Y6F1 533 aa28.96■■■□□ 2.23
KCNS3-204ENST00000465292 ZNF790Q6PG37 636 aa28.95■■■□□ 2.22
KCNS3-204ENST00000465292 ZNF784Q8NCA9 323 aaPredicted RBP28.95■■■□□ 2.22
KCNS3-204ENST00000465292 USP42Q9H9J4 1324 aaKnown RBP28.94■■■□□ 2.22
KCNS3-204ENST00000465292 DDX10Q13206 875 aaKnown RBP28.93■■■□□ 2.22
KCNS3-204ENST00000465292 FKBP8Q14318 412 aa28.93■■■□□ 2.22
KCNS3-204ENST00000465292 RTF1Q92541 710 aaKnown RBP28.93■■■□□ 2.22
KCNS3-204ENST00000465292 ZNF496Q96IT1 587 aaPredicted RBP28.93■■■□□ 2.22
KCNS3-204ENST00000465292 CICQ96RK0 1608 aaPredicted RBP28.93■■■□□ 2.22
KCNS3-204ENST00000465292 SOS1Q07889 1333 aaPredicted RBP28.93■■■□□ 2.22
KCNS3-204ENST00000465292 ZPR1O75312 459 aa28.92■■■□□ 2.22
KCNS3-204ENST00000465292 ZBTB1Q9Y2K1 713 aa28.92■■■□□ 2.22
KCNS3-204ENST00000465292 CEMIPQ8WUJ3 1361 aa28.91■■■□□ 2.22
KCNS3-204ENST00000465292 BTBD11A6QL63 1104 aa28.91■■■□□ 2.22
KCNS3-204ENST00000465292 STARD3NLO95772 234 aa28.91■■■□□ 2.22
KCNS3-204ENST00000465292 CANXP27824 592 aaKnown RBP28.91■■■□□ 2.22
KCNS3-204ENST00000465292 MCM10Q7L590 875 aa28.91■■■□□ 2.22
KCNS3-204ENST00000465292 CHD4Q14839 1912 aa28.9■■■□□ 2.22
KCNS3-204ENST00000465292 USPL1Q5W0Q7 1092 aa28.9■■■□□ 2.22
KCNS3-204ENST00000465292 C4AP0C0L4 1744 aa28.89■■■□□ 2.21
KCNS3-204ENST00000465292 KCNQ3O43525 872 aa28.88■■■□□ 2.21
KCNS3-204ENST00000465292 FMNL2Q96PY5 1086 aa28.88■■■□□ 2.21
KCNS3-204ENST00000465292 HEG1Q9ULI3 1381 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms