RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 ITPK1Q13572 414 aa21.54■■□□□ 1.04
NCSTN-210ENST00000465223 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
NCSTN-210ENST00000465223 KCNA3P22001 575 aa21.53■■□□□ 1.04
NCSTN-210ENST00000465223 SIK1P57059 783 aa21.53■■□□□ 1.04
NCSTN-210ENST00000465223 L3MBTL2Q969R5 705 aa21.53■■□□□ 1.04
NCSTN-210ENST00000465223 SBF1O95248 1867 aa21.53■■□□□ 1.04
NCSTN-210ENST00000465223 C4AP0C0L4 1744 aa21.52■■□□□ 1.03
NCSTN-210ENST00000465223 COG3Q96JB2 828 aa21.51■■□□□ 1.03
NCSTN-210ENST00000465223 CCDC87Q9NVE4 849 aa21.51■■□□□ 1.03
NCSTN-210ENST00000465223 TERF2IPQ9NYB0 399 aa21.51■■□□□ 1.03
NCSTN-210ENST00000465223 RRS1Q15050 365 aaKnown RBP21.49■■□□□ 1.03
NCSTN-210ENST00000465223 ATP6V1AP38606 617 aa21.48■■□□□ 1.03
NCSTN-210ENST00000465223 TMF1P82094 1093 aa21.48■■□□□ 1.03
NCSTN-210ENST00000465223 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
NCSTN-210ENST00000465223 DCAF5Q96JK2 942 aa21.48■■□□□ 1.03
NCSTN-210ENST00000465223 RTL1A6NKG5 1358 aa21.47■■□□□ 1.03
NCSTN-210ENST00000465223 PIM2Q9P1W9 311 aa21.46■■□□□ 1.03
NCSTN-210ENST00000465223 ASAP1Q9ULH1 1129 aa21.46■■□□□ 1.03
NCSTN-210ENST00000465223 TRAPPC3LQ5T215 181 aa21.45■■□□□ 1.02
NCSTN-210ENST00000465223 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
NCSTN-210ENST00000465223 DALRD3Q5D0E6 543 aaKnown RBP21.44■■□□□ 1.02
NCSTN-210ENST00000465223 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
NCSTN-210ENST00000465223 GYS1P13807 737 aa21.43■■□□□ 1.02
NCSTN-210ENST00000465223 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
NCSTN-210ENST00000465223 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
NCSTN-210ENST00000465223 FOXN1O15353 648 aa21.42■■□□□ 1.02
NCSTN-210ENST00000465223 RASSF7Q02833 373 aa21.41■■□□□ 1.02
NCSTN-210ENST00000465223 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
NCSTN-210ENST00000465223 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
NCSTN-210ENST00000465223 VEGFAP15692 232 aaPredicted RBP21.4■■□□□ 1.02
NCSTN-210ENST00000465223 CHRNA5P30532 468 aa21.4■■□□□ 1.02
NCSTN-210ENST00000465223 NKX1-1Q15270 411 aaPredicted RBP21.4■■□□□ 1.02
NCSTN-210ENST00000465223 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
NCSTN-210ENST00000465223 FAM161AQ3B820 660 aa21.39■■□□□ 1.01
NCSTN-210ENST00000465223 ATG3Q9NT62 314 aa21.39■■□□□ 1.01
NCSTN-210ENST00000465223 GLTPD2A6NH11 291 aa21.38■■□□□ 1.01
NCSTN-210ENST00000465223 PCDH10Q9P2E7 1040 aa21.38■■□□□ 1.01
NCSTN-210ENST00000465223 SLC4A9Q96Q91 983 aa21.37■■□□□ 1.01
NCSTN-210ENST00000465223 CCDC88AQ3V6T2 1871 aa21.37■■□□□ 1.01
NCSTN-210ENST00000465223 INSRP06213 1382 aa21.36■■□□□ 1.01
NCSTN-210ENST00000465223 RFC4P35249 363 aa21.36■■□□□ 1.01
NCSTN-210ENST00000465223 COL5A3P25940 1745 aaPredicted RBP21.35■■□□□ 1.01
NCSTN-210ENST00000465223 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
NCSTN-210ENST00000465223 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
NCSTN-210ENST00000465223 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
NCSTN-210ENST00000465223 KDRP35968 1356 aa21.35■■□□□ 1.01
NCSTN-210ENST00000465223 POTECB2RU33 542 aa21.34■■□□□ 1.01
NCSTN-210ENST00000465223 ADRA2BP18089 450 aa21.34■■□□□ 1.01
NCSTN-210ENST00000465223 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
NCSTN-210ENST00000465223 GGNBP2Q9H3C7 697 aa21.34■■□□□ 1.01
NCSTN-210ENST00000465223 MYH14Q7Z406 1995 aaKnown RBP21.34■■□□□ 1.01
NCSTN-210ENST00000465223 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1.01
NCSTN-210ENST00000465223 DDR1Q08345 913 aa21.33■■□□□ 1.01
NCSTN-210ENST00000465223 RPS6KA4O75676 772 aa21.32■■□□□ 1
NCSTN-210ENST00000465223 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
NCSTN-210ENST00000465223 SRP68Q9UHB9 627 aaKnown RBP21.32■■□□□ 1
NCSTN-210ENST00000465223 SPG7Q9UQ90 795 aa21.32■■□□□ 1
NCSTN-210ENST00000465223 LMNB1P20700 586 aa21.31■■□□□ 1
NCSTN-210ENST00000465223 RC3H1Q5TC82 1133 aaKnown RBP21.31■■□□□ 1
NCSTN-210ENST00000465223 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
NCSTN-210ENST00000465223 CREBZFQ9NS37 354 aa21.31■■□□□ 1
NCSTN-210ENST00000465223 FYB1O15117 783 aa21.3■■□□□ 1
NCSTN-210ENST00000465223 FKBP8Q14318 412 aa21.3■■□□□ 1
NCSTN-210ENST00000465223 PUS7Q96PZ0 661 aaKnown RBP21.3■■□□□ 1
NCSTN-210ENST00000465223 FLT4P35916 1363 aa21.3■■□□□ 1
NCSTN-210ENST00000465223 ZNF831Q5JPB2 1677 aa21.3■■□□□ 1
NCSTN-210ENST00000465223 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
NCSTN-210ENST00000465223 PHKG2P15735 406 aa21.28■■□□□ 1
NCSTN-210ENST00000465223 CTCFP49711 727 aaPredicted RBP21.28■■□□□ 1
NCSTN-210ENST00000465223 LBX1P52954 281 aa21.27■■□□□ 1
NCSTN-210ENST00000465223 NEUROD1Q13562 356 aa21.27■■□□□ 1
NCSTN-210ENST00000465223 ABHD8Q96I13 439 aa21.27■■□□□ 1
NCSTN-210ENST00000465223 NCAPD2Q15021 1401 aa21.27■■□□□ 1
NCSTN-210ENST00000465223 CNTNAP1P78357 1384 aa21.26■□□□□ 0.99
NCSTN-210ENST00000465223 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
NCSTN-210ENST00000465223 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
NCSTN-210ENST00000465223 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
NCSTN-210ENST00000465223 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
NCSTN-210ENST00000465223 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
NCSTN-210ENST00000465223 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
NCSTN-210ENST00000465223 EMILIN1Q9Y6C2 1016 aa21.24■□□□□ 0.99
NCSTN-210ENST00000465223 USP42Q9H9J4 1324 aaKnown RBP21.24■□□□□ 0.99
NCSTN-210ENST00000465223 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
NCSTN-210ENST00000465223 KIF20BQ96Q89 1820 aa21.22■□□□□ 0.99
NCSTN-210ENST00000465223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.22■□□□□ 0.99
NCSTN-210ENST00000465223 DLEC1Q9Y238 1755 aa21.22■□□□□ 0.99
NCSTN-210ENST00000465223 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
NCSTN-210ENST00000465223 KIF24Q5T7B8 1368 aa21.22■□□□□ 0.99
NCSTN-210ENST00000465223 NFKBIEO00221 500 aa21.21■□□□□ 0.99
NCSTN-210ENST00000465223 TM4SF1P30408 202 aa21.21■□□□□ 0.99
NCSTN-210ENST00000465223 VEGFBP49765 207 aa21.21■□□□□ 0.99
NCSTN-210ENST00000465223 MLLT1Q03111 559 aaPredicted RBP21.2■□□□□ 0.98
NCSTN-210ENST00000465223 DPY19L2Q6NUT2 758 aa21.2■□□□□ 0.98
NCSTN-210ENST00000465223 EYA1Q99502 592 aa21.2■□□□□ 0.98
NCSTN-210ENST00000465223 WBP1LQ9NX94 342 aa21.2■□□□□ 0.98
NCSTN-210ENST00000465223 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
NCSTN-210ENST00000465223 CRKLP46109 303 aaKnown RBP21.19■□□□□ 0.98
NCSTN-210ENST00000465223 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
NCSTN-210ENST00000465223 DICER1Q9UPY3 1922 aaKnown RBP21.18■□□□□ 0.98
NCSTN-210ENST00000465223 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms