RNA–Protein interactions for RNA: ENST00000465176.5

PCCB-205, Transcript of propionyl-CoA carboxylase subunit beta, human

TSL 5

Gene PCCB, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCB-205	ENST00000465176	KDM2B	Q8NHM5	1336 aa		13.91	□□□□□ -0.18
PCCB-205	ENST00000465176	FCHSD2	O94868	740 aa		13.91	□□□□□ -0.18
PCCB-205	ENST00000465176	RRS1	Q15050	365 aa	Known RBP	13.91	□□□□□ -0.18
PCCB-205	ENST00000465176	DPEP1	P16444	411 aa		13.9	□□□□□ -0.18
PCCB-205	ENST00000465176	ITPK1	Q13572	414 aa		13.9	□□□□□ -0.18
PCCB-205	ENST00000465176	INSR	P06213	1382 aa		13.9	□□□□□ -0.18
PCCB-205	ENST00000465176	HSPA1A	P0DMV8	641 aa	Known RBP	13.89	□□□□□ -0.19
PCCB-205	ENST00000465176	HSPA1B	P0DMV9	641 aa	Known RBP	13.89	□□□□□ -0.19
PCCB-205	ENST00000465176	NKX1-1	Q15270	411 aa	Predicted RBP	13.89	□□□□□ -0.19
PCCB-205	ENST00000465176	NCAPD2	Q15021	1401 aa		13.89	□□□□□ -0.19
PCCB-205	ENST00000465176	NLGN1	Q8N2Q7	840 aa		13.88	□□□□□ -0.19
PCCB-205	ENST00000465176	SMC1B	Q8NDV3	1235 aa		13.88	□□□□□ -0.19
PCCB-205	ENST00000465176	CARD11	Q9BXL7	1154 aa		13.88	□□□□□ -0.19
PCCB-205	ENST00000465176	CCDC87	Q9NVE4	849 aa		13.88	□□□□□ -0.19
PCCB-205	ENST00000465176	SBF1	O95248	1867 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	FLT4	P35916	1363 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	KDR	P35968	1356 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	KCNA3	P22001	575 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	TMF1	P82094	1093 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	HSP90AB2P	Q58FF8	381 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	DCAF5	Q96JK2	942 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	SIN3A	Q96ST3	1273 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	RRAGC	Q9HB90	399 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	RNF181	Q9P0P0	153 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	ZNF831	Q5JPB2	1677 aa		13.87	□□□□□ -0.19
PCCB-205	ENST00000465176	KIF24	Q5T7B8	1368 aa		13.86	□□□□□ -0.19
PCCB-205	ENST00000465176	ATP6V1A	P38606	617 aa		13.86	□□□□□ -0.19
PCCB-205	ENST00000465176	TMOD3	Q9NYL9	352 aa		13.86	□□□□□ -0.19
PCCB-205	ENST00000465176	ASAP1	Q9ULH1	1129 aa		13.86	□□□□□ -0.19
PCCB-205	ENST00000465176	COL5A3	P25940	1745 aa	Predicted RBP	13.86	□□□□□ -0.19
PCCB-205	ENST00000465176	SLC34A2	O95436	690 aa		13.85	□□□□□ -0.19
PCCB-205	ENST00000465176	RTCB	Q9Y3I0	505 aa	Known RBP	13.85	□□□□□ -0.19
PCCB-205	ENST00000465176	GYS1	P13807	737 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	ADRA2B	P18089	450 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	TRAPPC3L	Q5T215	181 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	GGNBP2	Q9H3C7	697 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	PIM2	Q9P1W9	311 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	KIF20B	Q96Q89	1820 aa		13.84	□□□□□ -0.19
PCCB-205	ENST00000465176	FYB1	O15117	783 aa		13.83	□□□□□ -0.2
PCCB-205	ENST00000465176	ATG3	Q9NT62	314 aa		13.83	□□□□□ -0.2
PCCB-205	ENST00000465176	SPG7	Q9UQ90	795 aa		13.83	□□□□□ -0.2
PCCB-205	ENST00000465176	PARP3	Q9Y6F1	533 aa		13.83	□□□□□ -0.2
PCCB-205	ENST00000465176	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.83	□□□□□ -0.2
PCCB-205	ENST00000465176	DALRD3	Q5D0E6	543 aa	Known RBP	13.82	□□□□□ -0.2
PCCB-205	ENST00000465176	ARHGEF1	Q92888	912 aa	Known RBP	13.82	□□□□□ -0.2
PCCB-205	ENST00000465176	CNTNAP4	Q9C0A0	1308 aa		13.82	□□□□□ -0.2
PCCB-205	ENST00000465176	KDM6A	O15550	1401 aa	Predicted RBP	13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	ANKRD26	Q9UPS8	1709 aa		13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	NEUROD1	Q13562	356 aa		13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	RC3H1	Q5TC82	1133 aa	Known RBP	13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	TESK2	Q96S53	571 aa		13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PCCB-205	ENST00000465176	MYH14	Q7Z406	1995 aa	Known RBP	13.8	□□□□□ -0.2
PCCB-205	ENST00000465176	RFC4	P35249	363 aa		13.8	□□□□□ -0.2
PCCB-205	ENST00000465176	SLC4A9	Q96Q91	983 aa		13.8	□□□□□ -0.2
PCCB-205	ENST00000465176	TONSL	Q96HA7	1378 aa		13.8	□□□□□ -0.2
PCCB-205	ENST00000465176	TIAM2	Q8IVF5	1701 aa		13.79	□□□□□ -0.2
PCCB-205	ENST00000465176	RPS6KA4	O75676	772 aa		13.79	□□□□□ -0.2
PCCB-205	ENST00000465176	PHKG2	P15735	406 aa		13.79	□□□□□ -0.2
PCCB-205	ENST00000465176	VEGFA	P15692	232 aa	Predicted RBP	13.78	□□□□□ -0.2
PCCB-205	ENST00000465176	IFNL2	Q8IZJ0	200 aa		13.78	□□□□□ -0.2
PCCB-205	ENST00000465176	CHRNA5	P30532	468 aa		13.77	□□□□□ -0.21
PCCB-205	ENST00000465176	RASSF7	Q02833	373 aa		13.77	□□□□□ -0.21
PCCB-205	ENST00000465176	DDR1	Q08345	913 aa		13.77	□□□□□ -0.21
PCCB-205	ENST00000465176	EMILIN1	Q9Y6C2	1016 aa		13.77	□□□□□ -0.21
PCCB-205	ENST00000465176	GLTPD2	A6NH11	291 aa		13.76	□□□□□ -0.21
PCCB-205	ENST00000465176	DLEC1	Q9Y238	1755 aa		13.76	□□□□□ -0.21
PCCB-205	ENST00000465176	USP42	Q9H9J4	1324 aa	Known RBP	13.75	□□□□□ -0.21
PCCB-205	ENST00000465176	FKBP8	Q14318	412 aa		13.75	□□□□□ -0.21
PCCB-205	ENST00000465176	EYA1	Q99502	592 aa		13.75	□□□□□ -0.21
PCCB-205	ENST00000465176	RBM42	Q9BTD8	480 aa	Known RBP	13.75	□□□□□ -0.21
PCCB-205	ENST00000465176	ADAMTS7	Q9UKP4	1686 aa		13.75	□□□□□ -0.21
PCCB-205	ENST00000465176	ST20-MTHFS	A0A0A6YYL1	179 aa		13.74	□□□□□ -0.21
PCCB-205	ENST00000465176	SLC24A1	O60721	1099 aa		13.74	□□□□□ -0.21
PCCB-205	ENST00000465176	LMNB1	P20700	586 aa		13.74	□□□□□ -0.21
PCCB-205	ENST00000465176	SRP68	Q9UHB9	627 aa	Known RBP	13.74	□□□□□ -0.21
PCCB-205	ENST00000465176	ERVV-2	B6SEH9	535 aa		13.73	□□□□□ -0.21
PCCB-205	ENST00000465176	PRDM10	Q9NQV6	1147 aa		13.73	□□□□□ -0.21
PCCB-205	ENST00000465176	CCDC88A	Q3V6T2	1871 aa		13.73	□□□□□ -0.21
PCCB-205	ENST00000465176	TJP1	Q07157	1748 aa		13.73	□□□□□ -0.21
PCCB-205	ENST00000465176	WASHC2A	Q641Q2	1341 aa		13.72	□□□□□ -0.21
PCCB-205	ENST00000465176	POLRMT	O00411	1230 aa	Known RBP	13.72	□□□□□ -0.21
PCCB-205	ENST00000465176	FOXN1	O15353	648 aa		13.72	□□□□□ -0.21
PCCB-205	ENST00000465176	CREBZF	Q9NS37	354 aa		13.72	□□□□□ -0.21
PCCB-205	ENST00000465176	NRXN2	Q9P2S2	1712 aa		13.72	□□□□□ -0.21
PCCB-205	ENST00000465176	AFDN	P55196	1824 aa	Known RBP	13.71	□□□□□ -0.21
PCCB-205	ENST00000465176	POTEC	B2RU33	542 aa		13.71	□□□□□ -0.21
PCCB-205	ENST00000465176	CRKL	P46109	303 aa	Known RBP	13.71	□□□□□ -0.21
PCCB-205	ENST00000465176	MKRN1	Q9UHC7	482 aa	Known RBP	13.71	□□□□□ -0.21
PCCB-205	ENST00000465176	PPM1G	O15355	546 aa	Predicted RBP	13.7	□□□□□ -0.22
PCCB-205	ENST00000465176	TM4SF1	P30408	202 aa		13.7	□□□□□ -0.22
PCCB-205	ENST00000465176	CNTNAP1	P78357	1384 aa		13.7	□□□□□ -0.22
PCCB-205	ENST00000465176	HSP90AB1	P08238	724 aa	Known RBP	13.69	□□□□□ -0.22
PCCB-205	ENST00000465176	DICER1	Q9UPY3	1922 aa	Known RBP	13.68	□□□□□ -0.22
PCCB-205	ENST00000465176	NFKBIE	O00221	500 aa		13.68	□□□□□ -0.22
PCCB-205	ENST00000465176	CTCF	P49711	727 aa	Predicted RBP	13.67	□□□□□ -0.22
PCCB-205	ENST00000465176	CHADL	Q6NUI6	762 aa		13.67	□□□□□ -0.22
PCCB-205	ENST00000465176	PTCD1	O75127	700 aa	Known RBP	13.66	□□□□□ -0.22
PCCB-205	ENST00000465176	CABP4	P57796	275 aa		13.66	□□□□□ -0.22
PCCB-205	ENST00000465176	TTLL6	Q8N841	843 aa		13.66	□□□□□ -0.22

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