RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 PHF14O94880 888 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 PTGER2P43116 358 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
XRN1-204ENST00000465074 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
XRN1-204ENST00000465074 SCN11AQ9UI33 1791 aa16.34■□□□□ 0.21
XRN1-204ENST00000465074 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
XRN1-204ENST00000465074 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
XRN1-204ENST00000465074 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
XRN1-204ENST00000465074 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
XRN1-204ENST00000465074 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
XRN1-204ENST00000465074 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
XRN1-204ENST00000465074 C4BP0C0L5 1744 aa16.33■□□□□ 0.21
XRN1-204ENST00000465074 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
XRN1-204ENST00000465074 ITPK1Q13572 414 aa16.33■□□□□ 0.2
XRN1-204ENST00000465074 MSL1Q68DK7 614 aa16.33■□□□□ 0.2
XRN1-204ENST00000465074 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
XRN1-204ENST00000465074 POLD1P28340 1107 aa16.32■□□□□ 0.2
XRN1-204ENST00000465074 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
XRN1-204ENST00000465074 ARXQ96QS3 562 aa16.32■□□□□ 0.2
XRN1-204ENST00000465074 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
XRN1-204ENST00000465074 GNPATO15228 680 aa16.31■□□□□ 0.2
XRN1-204ENST00000465074 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
XRN1-204ENST00000465074 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
XRN1-204ENST00000465074 FHDC1Q9C0D6 1143 aaPredicted RBP16.3■□□□□ 0.2
XRN1-204ENST00000465074 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
XRN1-204ENST00000465074 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
XRN1-204ENST00000465074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.28■□□□□ 0.2
XRN1-204ENST00000465074 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
XRN1-204ENST00000465074 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
XRN1-204ENST00000465074 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
XRN1-204ENST00000465074 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
XRN1-204ENST00000465074 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.2
XRN1-204ENST00000465074 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
XRN1-204ENST00000465074 TEFQ10587 303 aa16.26■□□□□ 0.19
XRN1-204ENST00000465074 SYT17Q9BSW7 474 aa16.26■□□□□ 0.19
XRN1-204ENST00000465074 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
XRN1-204ENST00000465074 NEFMP07197 916 aa16.24■□□□□ 0.19
XRN1-204ENST00000465074 SSFA2P28290 1259 aa16.24■□□□□ 0.19
XRN1-204ENST00000465074 COL5A3P25940 1745 aaPredicted RBP16.23■□□□□ 0.19
XRN1-204ENST00000465074 FCHSD2O94868 740 aa16.23■□□□□ 0.19
XRN1-204ENST00000465074 RALBP1Q15311 655 aa16.23■□□□□ 0.19
XRN1-204ENST00000465074 TRAPPC3LQ5T215 181 aa16.23■□□□□ 0.19
XRN1-204ENST00000465074 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
XRN1-204ENST00000465074 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
XRN1-204ENST00000465074 IL17REQ8NFR9 667 aa16.23■□□□□ 0.19
XRN1-204ENST00000465074 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
XRN1-204ENST00000465074 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
XRN1-204ENST00000465074 RFC4P35249 363 aa16.21■□□□□ 0.19
XRN1-204ENST00000465074 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
XRN1-204ENST00000465074 RC3H1Q5TC82 1133 aaKnown RBP16.21■□□□□ 0.19
XRN1-204ENST00000465074 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
XRN1-204ENST00000465074 TJP1Q07157 1748 aa16.21■□□□□ 0.19
XRN1-204ENST00000465074 COL24A1Q17RW2 1714 aa16.2■□□□□ 0.18
XRN1-204ENST00000465074 MCM10Q7L590 875 aa16.2■□□□□ 0.18
XRN1-204ENST00000465074 MRC1P22897 1456 aa16.2■□□□□ 0.18
XRN1-204ENST00000465074 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
XRN1-204ENST00000465074 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
XRN1-204ENST00000465074 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
XRN1-204ENST00000465074 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
XRN1-204ENST00000465074 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
XRN1-204ENST00000465074 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
XRN1-204ENST00000465074 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
XRN1-204ENST00000465074 GPR162Q16538 588 aa16.18■□□□□ 0.18
XRN1-204ENST00000465074 NLGN2Q8NFZ4 835 aa16.18■□□□□ 0.18
XRN1-204ENST00000465074 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
XRN1-204ENST00000465074 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
XRN1-204ENST00000465074 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
XRN1-204ENST00000465074 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
XRN1-204ENST00000465074 KCPQ6ZWJ8 1503 aa16.16■□□□□ 0.18
XRN1-204ENST00000465074 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
XRN1-204ENST00000465074 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
XRN1-204ENST00000465074 ZNF790Q6PG37 636 aa16.16■□□□□ 0.18
XRN1-204ENST00000465074 PNNQ9H307 717 aaKnown RBP16.16■□□□□ 0.18
XRN1-204ENST00000465074 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
XRN1-204ENST00000465074 KCNQ3O43525 872 aa16.15■□□□□ 0.18
XRN1-204ENST00000465074 MMP10P09238 476 aa16.15■□□□□ 0.18
XRN1-204ENST00000465074 CYP19A1P11511 503 aaPredicted RBP16.15■□□□□ 0.18
XRN1-204ENST00000465074 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
XRN1-204ENST00000465074 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
XRN1-204ENST00000465074 ZNF330Q9Y3S2 320 aaPredicted RBP16.15■□□□□ 0.18
XRN1-204ENST00000465074 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
XRN1-204ENST00000465074 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
XRN1-204ENST00000465074 STARD3NLO95772 234 aa16.14■□□□□ 0.17
XRN1-204ENST00000465074 NLGN1Q8N2Q7 840 aa16.14■□□□□ 0.17
XRN1-204ENST00000465074 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
XRN1-204ENST00000465074 ZPR1O75312 459 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 YY1P25490 414 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
XRN1-204ENST00000465074 NFE2L2Q16236 605 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 FMNL2Q96PY5 1086 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms