RNA–Protein interactions for RNA: ENST00000465014.6

CBWD1-211, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-211ENST00000465014 PAPPAQ13219 1627 aa10.5□□□□□ -0.73
CBWD1-211ENST00000465014 TUBGCP6Q96RT7 1819 aa10.5□□□□□ -0.73
CBWD1-211ENST00000465014 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
CBWD1-211ENST00000465014 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
CBWD1-211ENST00000465014 SPNS2Q8IVW8 549 aa10.49□□□□□ -0.73
CBWD1-211ENST00000465014 PDGFDQ9GZP0 370 aaPredicted RBP10.49□□□□□ -0.73
CBWD1-211ENST00000465014 STK32BQ9NY57 414 aa10.49□□□□□ -0.73
CBWD1-211ENST00000465014 TOGARAM1Q9Y4F4 1720 aa10.49□□□□□ -0.73
CBWD1-211ENST00000465014 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
CBWD1-211ENST00000465014 SLC15A2Q16348 729 aa10.48□□□□□ -0.73
CBWD1-211ENST00000465014 SPON1Q9HCB6 807 aa10.48□□□□□ -0.73
CBWD1-211ENST00000465014 LRRC4BQ9NT99 713 aa10.48□□□□□ -0.73
CBWD1-211ENST00000465014 NSD2O96028 1365 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 KIF7Q2M1P5 1343 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 TAF1LQ8IZX4 1826 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 EYA1Q99502 592 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 NCAPD2Q15021 1401 aa10.47□□□□□ -0.73
CBWD1-211ENST00000465014 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
CBWD1-211ENST00000465014 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
CBWD1-211ENST00000465014 POTEFA5A3E0 1075 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 CYP27B1O15528 508 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 ZBTB7AO95365 584 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 KCNQ4P56696 695 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 EIF4A2Q14240 407 aaKnown RBP10.46□□□□□ -0.74
CBWD1-211ENST00000465014 MORC1Q86VD1 984 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 KNSTRNQ9Y448 316 aa10.46□□□□□ -0.74
CBWD1-211ENST00000465014 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
CBWD1-211ENST00000465014 PPP1R1BQ9UD71 204 aaPredicted RBP10.45□□□□□ -0.74
CBWD1-211ENST00000465014 C5P01031 1676 aa10.44□□□□□ -0.74
CBWD1-211ENST00000465014 SLC27A3Q5K4L6 730 aa10.43□□□□□ -0.74
CBWD1-211ENST00000465014 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
CBWD1-211ENST00000465014 VIRMAQ69YN4 1812 aaKnown RBP10.43□□□□□ -0.74
CBWD1-211ENST00000465014 MPRIPQ6WCQ1 1025 aa10.43□□□□□ -0.74
CBWD1-211ENST00000465014 ST18O60284 1047 aa10.42□□□□□ -0.74
CBWD1-211ENST00000465014 PTGER2P43116 358 aa10.42□□□□□ -0.74
CBWD1-211ENST00000465014 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-211ENST00000465014 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-211ENST00000465014 IGSF1Q8N6C5 1336 aa10.41□□□□□ -0.74
CBWD1-211ENST00000465014 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
CBWD1-211ENST00000465014 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
CBWD1-211ENST00000465014 NKX1-1Q15270 411 aaPredicted RBP10.4□□□□□ -0.74
CBWD1-211ENST00000465014 CC2D1BQ5T0F9 858 aaKnown RBP10.4□□□□□ -0.74
CBWD1-211ENST00000465014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■■■■□ 25.6
CBWD1-211ENST00000465014 PNPLA7Q6ZV29 1317 aa10.4□□□□□ -0.74
CBWD1-211ENST00000465014 PALLDQ8WX93 1383 aa10.4□□□□□ -0.75
CBWD1-211ENST00000465014 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
CBWD1-211ENST00000465014 PHKG2P15735 406 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
CBWD1-211ENST00000465014 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 PIGBQ92521 554 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 AEBP1Q8IUX7 1158 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
CBWD1-211ENST00000465014 SCN11AQ9UI33 1791 aa10.38□□□□□ -0.75
CBWD1-211ENST00000465014 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
CBWD1-211ENST00000465014 IL13P35225 146 aa10.37□□□□□ -0.75
CBWD1-211ENST00000465014 MTHFSP49914 203 aa10.37□□□□□ -0.75
CBWD1-211ENST00000465014 MNX1P50219 401 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-211ENST00000465014 PLEKHO1Q53GL0 409 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-211ENST00000465014 SULT6B1Q6IMI4 303 aa10.37□□□□□ -0.75
CBWD1-211ENST00000465014 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-211ENST00000465014 ZNF530Q6P9A1 599 aaPredicted RBP10.36□□□□□ -0.75
CBWD1-211ENST00000465014 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
CBWD1-211ENST00000465014 ASAP1Q9ULH1 1129 aa10.36□□□□□ -0.75
CBWD1-211ENST00000465014 PLEKHG2Q9H7P9 1386 aa10.36□□□□□ -0.75
CBWD1-211ENST00000465014 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
CBWD1-211ENST00000465014 SLC16A10Q8TF71 515 aa10.35□□□□□ -0.75
CBWD1-211ENST00000465014 ARXQ96QS3 562 aa10.35□□□□□ -0.75
CBWD1-211ENST00000465014 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
CBWD1-211ENST00000465014 AMOTQ4VCS5 1084 aa10.35□□□□□ -0.75
CBWD1-211ENST00000465014 SYT17Q9BSW7 474 aa10.35□□□□□ -0.75
CBWD1-211ENST00000465014 BMP2KQ9NSY1 1161 aaPredicted RBP10.35□□□□□ -0.75
CBWD1-211ENST00000465014 KDRP35968 1356 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 CHD4Q14839 1912 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 COL5A3P25940 1745 aaPredicted RBP10.34□□□□□ -0.75
CBWD1-211ENST00000465014 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 SEC24BO95487 1268 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
CBWD1-211ENST00000465014 HMOX1P09601 288 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 YY1P25490 414 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 SIK1P57059 783 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 SMIM5Q71RC9 77 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 DCAF5Q96JK2 942 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 ATG3Q9NT62 314 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
CBWD1-211ENST00000465014 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
CBWD1-211ENST00000465014 ERVV-2B6SEH9 535 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 POLD1P28340 1107 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 AMIGO3Q86WK7 504 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 LINC00116Q8NCU8 138 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 AK7Q96M32 723 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 ZNF831Q5JPB2 1677 aa10.33□□□□□ -0.76
CBWD1-211ENST00000465014 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
CBWD1-211ENST00000465014 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms