RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 FLAD1Q8NFF5 587 aa35.01■■■■□ 3.2
U2AF1-206ENST00000464750 COL3A1P02461 1466 aaPredicted RBP35.01■■■■□ 3.19
U2AF1-206ENST00000464750 DIAPH1O60610 1272 aaKnown RBP35■■■■□ 3.19
U2AF1-206ENST00000464750 LINC00116Q8NCU8 138 aa35■■■■□ 3.19
U2AF1-206ENST00000464750 ZNF831Q5JPB2 1677 aa35■■■■□ 3.19
U2AF1-206ENST00000464750 HMOX1P09601 288 aa34.99■■■■□ 3.19
U2AF1-206ENST00000464750 VIRMAQ69YN4 1812 aaKnown RBP34.99■■■■□ 3.19
U2AF1-206ENST00000464750 ATP6V1AP38606 617 aa34.98■■■■□ 3.19
U2AF1-206ENST00000464750 CABP4P57796 275 aa34.98■■■■□ 3.19
U2AF1-206ENST00000464750 ITPK1Q13572 414 aa34.98■■■■□ 3.19
U2AF1-206ENST00000464750 MSL1Q68DK7 614 aa34.97■■■■□ 3.19
U2AF1-206ENST00000464750 AMIGO3Q86WK7 504 aa34.97■■■■□ 3.19
U2AF1-206ENST00000464750 KLHL34Q8N239 644 aa34.97■■■■□ 3.19
U2AF1-206ENST00000464750 COL5A3P25940 1745 aaPredicted RBP34.95■■■■□ 3.19
U2AF1-206ENST00000464750 PHF14O94880 888 aa34.95■■■■□ 3.19
U2AF1-206ENST00000464750 AKAP4Q5JQC9 854 aa34.92■■■■□ 3.18
U2AF1-206ENST00000464750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.91■■■■□ 3.18
U2AF1-206ENST00000464750 SSFA2P28290 1259 aa34.91■■■■□ 3.18
U2AF1-206ENST00000464750 SMIM5Q71RC9 77 aa34.91■■■■□ 3.18
U2AF1-206ENST00000464750 RBM42Q9BTD8 480 aaKnown RBP34.91■■■■□ 3.18
U2AF1-206ENST00000464750 GNPATO15228 680 aa34.9■■■■□ 3.18
U2AF1-206ENST00000464750 SLC4A9Q96Q91 983 aa34.9■■■■□ 3.18
U2AF1-206ENST00000464750 YY1P25490 414 aa34.89■■■■□ 3.18
U2AF1-206ENST00000464750 NFATC2IPQ8NCF5 419 aa34.88■■■■□ 3.17
U2AF1-206ENST00000464750 MRC1P22897 1456 aa34.87■■■■□ 3.17
U2AF1-206ENST00000464750 ADAMTS7Q9UKP4 1686 aa34.86■■■■□ 3.17
U2AF1-206ENST00000464750 U2SURPO15042 1029 aaKnown RBP34.86■■■■□ 3.17
U2AF1-206ENST00000464750 MTHFSDQ2M296 383 aaKnown RBP34.84■■■■□ 3.17
U2AF1-206ENST00000464750 CICQ96RK0 1608 aaPredicted RBP34.84■■■■□ 3.17
U2AF1-206ENST00000464750 TJP1Q07157 1748 aa34.84■■■■□ 3.17
U2AF1-206ENST00000464750 MYH14Q7Z406 1995 aaKnown RBP34.82■■■■□ 3.16
U2AF1-206ENST00000464750 NLGN2Q8NFZ4 835 aa34.82■■■■□ 3.16
U2AF1-206ENST00000464750 CHD4Q14839 1912 aa34.81■■■■□ 3.16
U2AF1-206ENST00000464750 PTCD1O75127 700 aaKnown RBP34.81■■■■□ 3.16
U2AF1-206ENST00000464750 SLC52A2Q9HAB3 445 aa34.81■■■■□ 3.16
U2AF1-206ENST00000464750 LGR6Q9HBX8 967 aa34.81■■■■□ 3.16
U2AF1-206ENST00000464750 CNTNAP4Q9C0A0 1308 aa34.81■■■■□ 3.16
U2AF1-206ENST00000464750 RNMTO43148 476 aaKnown RBP34.8■■■■□ 3.16
U2AF1-206ENST00000464750 CFAP53Q96M91 514 aa34.8■■■■□ 3.16
U2AF1-206ENST00000464750 UTRNP46939 3433 aa34.8■■■■□ 3.16
U2AF1-206ENST00000464750 RTCBQ9Y3I0 505 aaKnown RBP34.78■■■■□ 3.16
U2AF1-206ENST00000464750 RC3H1Q5TC82 1133 aaKnown RBP34.77■■■■□ 3.16
U2AF1-206ENST00000464750 C4AP0C0L4 1744 aa34.77■■■■□ 3.16
U2AF1-206ENST00000464750 PPP2R1AP30153 589 aa34.76■■■■□ 3.16
U2AF1-206ENST00000464750 GPR162Q16538 588 aa34.76■■■■□ 3.16
U2AF1-206ENST00000464750 PELP1Q8IZL8 1130 aaKnown RBP34.73■■■■□ 3.15
U2AF1-206ENST00000464750 TRAPPC3LQ5T215 181 aa34.72■■■■□ 3.15
U2AF1-206ENST00000464750 KCPQ6ZWJ8 1503 aa34.71■■■■□ 3.15
U2AF1-206ENST00000464750 ADRA2BP18089 450 aa34.71■■■■□ 3.15
U2AF1-206ENST00000464750 GAS2L2Q8NHY3 880 aa34.71■■■■□ 3.15
U2AF1-206ENST00000464750 CD2APQ9Y5K6 639 aa34.71■■■■□ 3.15
U2AF1-206ENST00000464750 UBR2Q8IWV8 1755 aa34.7■■■■□ 3.15
U2AF1-206ENST00000464750 RPS6KA4O75676 772 aa34.7■■■■□ 3.15
U2AF1-206ENST00000464750 CRKLP46109 303 aaKnown RBP34.69■■■■□ 3.14
U2AF1-206ENST00000464750 SLC39A6Q13433 755 aa34.69■■■■□ 3.14
U2AF1-206ENST00000464750 NUDCQ9Y266 331 aa34.69■■■■□ 3.14
U2AF1-206ENST00000464750 SIPA1L3O60292 1781 aaPredicted RBP34.68■■■■□ 3.14
U2AF1-206ENST00000464750 ARHGEF1Q92888 912 aaKnown RBP34.68■■■■□ 3.14
U2AF1-206ENST00000464750 PRKAR2BP31323 418 aa34.67■■■■□ 3.14
U2AF1-206ENST00000464750 RSPH6AQ9H0K4 717 aa34.67■■■■□ 3.14
U2AF1-206ENST00000464750 GOLGB1Q14789 3259 aaKnown RBP34.67■■■■□ 3.14
U2AF1-206ENST00000464750 GNAT3A8MTJ3 354 aa34.65■■■■□ 3.14
U2AF1-206ENST00000464750 MMP10P09238 476 aa34.64■■■■□ 3.14
U2AF1-206ENST00000464750 RFC4P35249 363 aa34.64■■■■□ 3.14
U2AF1-206ENST00000464750 DNAJC10Q8IXB1 793 aa34.64■■■■□ 3.14
U2AF1-206ENST00000464750 U2AF1L5P0DN76 240 aaPredicted RBP34.63■■■■□ 3.13
U2AF1-206ENST00000464750 U2AF1Q01081 240 aaKnown RBP eCLIP34.63■■■■□ 3.13
U2AF1-206ENST00000464750 PHACTR3Q96KR7 559 aa34.62■■■■□ 3.13
U2AF1-206ENST00000464750 KIF13BQ9NQT8 1826 aa34.61■■■■□ 3.13
U2AF1-206ENST00000464750 YBX3P16989 372 aaKnown RBP eCLIP34.61■■■■□ 3.13
U2AF1-206ENST00000464750 NLGN1Q8N2Q7 840 aa34.61■■■■□ 3.13
U2AF1-206ENST00000464750 GYS1P13807 737 aa34.6■■■■□ 3.13
U2AF1-206ENST00000464750 TEFQ10587 303 aa34.6■■■■□ 3.13
U2AF1-206ENST00000464750 IL17REQ8NFR9 667 aa34.6■■■■□ 3.13
U2AF1-206ENST00000464750 INTS5Q6P9B9 1019 aaKnown RBP34.59■■■■□ 3.13
U2AF1-206ENST00000464750 CCDC87Q9NVE4 849 aa34.58■■■■□ 3.13
U2AF1-206ENST00000464750 TTC5Q8N0Z6 440 aa34.57■■■■□ 3.12
U2AF1-206ENST00000464750 CEMIPQ8WUJ3 1361 aa34.56■■■■□ 3.12
U2AF1-206ENST00000464750 USP42Q9H9J4 1324 aaKnown RBP34.55■■■■□ 3.12
U2AF1-206ENST00000464750 GRIN3BO60391 1043 aa34.55■■■■□ 3.12
U2AF1-206ENST00000464750 CYP19A1P11511 503 aaPredicted RBP34.55■■■■□ 3.12
U2AF1-206ENST00000464750 VSIG10Q8N0Z9 540 aa34.55■■■■□ 3.12
U2AF1-206ENST00000464750 SRP68Q9UHB9 627 aaKnown RBP34.55■■■■□ 3.12
U2AF1-206ENST00000464750 KIAA1551Q9HCM1 1747 aa34.55■■■■□ 3.12
U2AF1-206ENST00000464750 FCHSD2O94868 740 aa34.54■■■■□ 3.12
U2AF1-206ENST00000464750 C10orf71Q711Q0 1435 aa34.53■■■■□ 3.12
U2AF1-206ENST00000464750 SOS1Q07889 1333 aaPredicted RBP34.53■■■■□ 3.12
U2AF1-206ENST00000464750 ZNF784Q8NCA9 323 aaPredicted RBP34.52■■■■□ 3.12
U2AF1-206ENST00000464750 N4BP2Q86UW6 1770 aaPredicted RBP34.51■■■■□ 3.11
U2AF1-206ENST00000464750 ZNF790Q6PG37 636 aa34.5■■■■□ 3.11
U2AF1-206ENST00000464750 ZBTB1Q9Y2K1 713 aa34.5■■■■□ 3.11
U2AF1-206ENST00000464750 WWC3Q9ULE0 1092 aa34.49■■■■□ 3.11
U2AF1-206ENST00000464750 PARP3Q9Y6F1 533 aa34.49■■■■□ 3.11
U2AF1-206ENST00000464750 PXDNLA1KZ92 1463 aa34.49■■■■□ 3.11
U2AF1-206ENST00000464750 COL15A1P39059 1388 aa34.49■■■■□ 3.11
U2AF1-206ENST00000464750 HEG1Q9ULI3 1381 aa34.49■■■■□ 3.11
U2AF1-206ENST00000464750 FKBP8Q14318 412 aa34.48■■■■□ 3.11
U2AF1-206ENST00000464750 ZNF496Q96IT1 587 aaPredicted RBP34.48■■■■□ 3.11
U2AF1-206ENST00000464750 RTF1Q92541 710 aaKnown RBP34.45■■■■□ 3.11
U2AF1-206ENST00000464750 DLG5Q8TDM6 1919 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms