RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 AMER1Q5JTC6 1135 aaPredicted RBP26.55■■□□□ 1.84
MCF2L2-206ENST00000464626 CD2APQ9Y5K6 639 aa26.55■■□□□ 1.84
MCF2L2-206ENST00000464626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.54■■□□□ 1.84
MCF2L2-206ENST00000464626 ATP6V1AP38606 617 aa26.54■■□□□ 1.84
MCF2L2-206ENST00000464626 KIF7Q2M1P5 1343 aa26.54■■□□□ 1.84
MCF2L2-206ENST00000464626 KDRP35968 1356 aa26.53■■□□□ 1.84
MCF2L2-206ENST00000464626 KDM6AO15550 1401 aaPredicted RBP26.51■■□□□ 1.83
MCF2L2-206ENST00000464626 IL13P35225 146 aa26.51■■□□□ 1.83
MCF2L2-206ENST00000464626 ZNF530Q6P9A1 599 aaPredicted RBP26.51■■□□□ 1.83
MCF2L2-206ENST00000464626 AEBP1Q8IUX7 1158 aa26.51■■□□□ 1.83
MCF2L2-206ENST00000464626 PHF14O94880 888 aa26.5■■□□□ 1.83
MCF2L2-206ENST00000464626 GRIN3BO60391 1043 aa26.49■■□□□ 1.83
MCF2L2-206ENST00000464626 PELP1Q8IZL8 1130 aaKnown RBP26.49■■□□□ 1.83
MCF2L2-206ENST00000464626 GNPATO15228 680 aa26.48■■□□□ 1.83
MCF2L2-206ENST00000464626 SULT6B1Q6IMI4 303 aa26.48■■□□□ 1.83
MCF2L2-206ENST00000464626 SMIM5Q71RC9 77 aa26.48■■□□□ 1.83
MCF2L2-206ENST00000464626 YBX3P16989 372 aaKnown RBP eCLIP26.47■■□□□ 1.83
MCF2L2-206ENST00000464626 SLC4A9Q96Q91 983 aa26.47■■□□□ 1.83
MCF2L2-206ENST00000464626 PER1O15534 1290 aaPredicted RBP26.46■■□□□ 1.83
MCF2L2-206ENST00000464626 MTHFSP49914 203 aa26.46■■□□□ 1.83
MCF2L2-206ENST00000464626 CABP4P57796 275 aa26.46■■□□□ 1.83
MCF2L2-206ENST00000464626 C1orf141Q5JVX7 400 aa26.46■■□□□ 1.83
MCF2L2-206ENST00000464626 COL5A3P25940 1745 aaPredicted RBP26.45■■□□□ 1.83
MCF2L2-206ENST00000464626 RC3H1Q5TC82 1133 aaKnown RBP26.45■■□□□ 1.82
MCF2L2-206ENST00000464626 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
MCF2L2-206ENST00000464626 RBM42Q9BTD8 480 aaKnown RBP26.42■■□□□ 1.82
MCF2L2-206ENST00000464626 RTCBQ9Y3I0 505 aaKnown RBP26.42■■□□□ 1.82
MCF2L2-206ENST00000464626 SCN11AQ9UI33 1791 aa26.42■■□□□ 1.82
MCF2L2-206ENST00000464626 ADRA2BP18089 450 aa26.41■■□□□ 1.82
MCF2L2-206ENST00000464626 TRAPPC3LQ5T215 181 aa26.4■■□□□ 1.82
MCF2L2-206ENST00000464626 MYH14Q7Z406 1995 aaKnown RBP26.39■■□□□ 1.82
MCF2L2-206ENST00000464626 NFATC2IPQ8NCF5 419 aa26.39■■□□□ 1.82
MCF2L2-206ENST00000464626 CICQ96RK0 1608 aaPredicted RBP26.39■■□□□ 1.81
MCF2L2-206ENST00000464626 NPC1L1Q9UHC9 1359 aa26.38■■□□□ 1.81
MCF2L2-206ENST00000464626 RPS6KA4O75676 772 aa26.38■■□□□ 1.81
MCF2L2-206ENST00000464626 AKAP4Q5JQC9 854 aa26.38■■□□□ 1.81
MCF2L2-206ENST00000464626 NLGN1Q8N2Q7 840 aa26.36■■□□□ 1.81
MCF2L2-206ENST00000464626 KIF13BQ9NQT8 1826 aa26.35■■□□□ 1.81
MCF2L2-206ENST00000464626 MMP10P09238 476 aa26.35■■□□□ 1.81
MCF2L2-206ENST00000464626 ARHGEF1Q92888 912 aaKnown RBP26.35■■□□□ 1.81
MCF2L2-206ENST00000464626 CC2D1BQ5T0F9 858 aaKnown RBP26.34■■□□□ 1.81
MCF2L2-206ENST00000464626 DIAPH1O60610 1272 aaKnown RBP26.33■■□□□ 1.81
MCF2L2-206ENST00000464626 PTCD1O75127 700 aaKnown RBP26.33■■□□□ 1.81
MCF2L2-206ENST00000464626 TJP1Q07157 1748 aa26.33■■□□□ 1.81
MCF2L2-206ENST00000464626 MRC1P22897 1456 aa26.32■■□□□ 1.8
MCF2L2-206ENST00000464626 SLC52A2Q9HAB3 445 aa26.32■■□□□ 1.8
MCF2L2-206ENST00000464626 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
MCF2L2-206ENST00000464626 C4AP0C0L4 1744 aa26.31■■□□□ 1.8
MCF2L2-206ENST00000464626 HMOX1P09601 288 aa26.31■■□□□ 1.8
MCF2L2-206ENST00000464626 RFC4P35249 363 aa26.31■■□□□ 1.8
MCF2L2-206ENST00000464626 C1QTNF8P60827 252 aa26.31■■□□□ 1.8
MCF2L2-206ENST00000464626 ADAMTS7Q9UKP4 1686 aa26.31■■□□□ 1.8
MCF2L2-206ENST00000464626 GYS1P13807 737 aa26.3■■□□□ 1.8
MCF2L2-206ENST00000464626 CRKLP46109 303 aaKnown RBP26.3■■□□□ 1.8
MCF2L2-206ENST00000464626 LGR6Q9HBX8 967 aa26.29■■□□□ 1.8
MCF2L2-206ENST00000464626 COL3A1P02461 1466 aaPredicted RBP26.29■■□□□ 1.8
MCF2L2-206ENST00000464626 KIAA1551Q9HCM1 1747 aa26.28■■□□□ 1.8
MCF2L2-206ENST00000464626 RNMTO43148 476 aaKnown RBP26.28■■□□□ 1.8
MCF2L2-206ENST00000464626 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
MCF2L2-206ENST00000464626 TGFB2P61812 414 aa26.27■■□□□ 1.8
MCF2L2-206ENST00000464626 MTHFSDQ2M296 383 aaKnown RBP26.27■■□□□ 1.8
MCF2L2-206ENST00000464626 PXDNLA1KZ92 1463 aa26.27■■□□□ 1.8
MCF2L2-206ENST00000464626 GIGYF1O75420 1035 aaPredicted RBP26.26■■□□□ 1.79
MCF2L2-206ENST00000464626 ADCY9O60503 1353 aa26.25■■□□□ 1.79
MCF2L2-206ENST00000464626 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
MCF2L2-206ENST00000464626 CCDC87Q9NVE4 849 aa26.24■■□□□ 1.79
MCF2L2-206ENST00000464626 ATP10DQ9P241 1426 aa26.23■■□□□ 1.79
MCF2L2-206ENST00000464626 USP42Q9H9J4 1324 aaKnown RBP26.23■■□□□ 1.79
MCF2L2-206ENST00000464626 PARP3Q9Y6F1 533 aa26.23■■□□□ 1.79
MCF2L2-206ENST00000464626 KCPQ6ZWJ8 1503 aa26.22■■□□□ 1.79
MCF2L2-206ENST00000464626 N4BP2Q86UW6 1770 aaPredicted RBP26.22■■□□□ 1.79
MCF2L2-206ENST00000464626 DNAJC10Q8IXB1 793 aa26.21■■□□□ 1.79
MCF2L2-206ENST00000464626 WWC3Q9ULE0 1092 aa26.2■■□□□ 1.78
MCF2L2-206ENST00000464626 SLC39A6Q13433 755 aa26.19■■□□□ 1.78
MCF2L2-206ENST00000464626 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
MCF2L2-206ENST00000464626 SRP68Q9UHB9 627 aaKnown RBP26.19■■□□□ 1.78
MCF2L2-206ENST00000464626 UBR2Q8IWV8 1755 aa26.19■■□□□ 1.78
MCF2L2-206ENST00000464626 BRCA1P38398 1863 aaKnown RBP26.19■■□□□ 1.78
MCF2L2-206ENST00000464626 CYP19A1P11511 503 aaPredicted RBP26.18■■□□□ 1.78
MCF2L2-206ENST00000464626 SOS1Q07889 1333 aaPredicted RBP26.17■■□□□ 1.78
MCF2L2-206ENST00000464626 A0A0G2JLW4 131 aa26.17■■□□□ 1.78
MCF2L2-206ENST00000464626 FKBP8Q14318 412 aa26.17■■□□□ 1.78
MCF2L2-206ENST00000464626 GAS2L2Q8NHY3 880 aa26.17■■□□□ 1.78
MCF2L2-206ENST00000464626 SENP3-EIF4A1A0A087X0R7 540 aa26.16■■□□□ 1.78
MCF2L2-206ENST00000464626 U2SURPO15042 1029 aaKnown RBP26.16■■□□□ 1.78
MCF2L2-206ENST00000464626 DPEP1P16444 411 aa26.15■■□□□ 1.78
MCF2L2-206ENST00000464626 DDR1Q08345 913 aa26.14■■□□□ 1.78
MCF2L2-206ENST00000464626 GPBP1L1Q9HC44 474 aaPredicted RBP26.14■■□□□ 1.78
MCF2L2-206ENST00000464626 GNAT3A8MTJ3 354 aa26.13■■□□□ 1.77
MCF2L2-206ENST00000464626 ZPR1O75312 459 aa26.13■■□□□ 1.77
MCF2L2-206ENST00000464626 TM4SF1P30408 202 aa26.13■■□□□ 1.77
MCF2L2-206ENST00000464626 CNGB1Q14028 1251 aaPredicted RBP26.13■■□□□ 1.77
MCF2L2-206ENST00000464626 BCS1LQ9Y276 419 aa26.13■■□□□ 1.77
MCF2L2-206ENST00000464626 SIPA1L3O60292 1781 aaPredicted RBP26.12■■□□□ 1.77
MCF2L2-206ENST00000464626 KCNA3P22001 575 aa26.12■■□□□ 1.77
MCF2L2-206ENST00000464626 IL17REQ8NFR9 667 aa26.12■■□□□ 1.77
MCF2L2-206ENST00000464626 CFAP53Q96M91 514 aa26.12■■□□□ 1.77
MCF2L2-206ENST00000464626 COL15A1P39059 1388 aa26.11■■□□□ 1.77
MCF2L2-206ENST00000464626 POLRMTO00411 1230 aaKnown RBP26.11■■□□□ 1.77
MCF2L2-206ENST00000464626 USPL1Q5W0Q7 1092 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms