RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 QSER1Q2KHR3 1735 aa21.77■■□□□ 1.08
SSNA1-204ENST00000464553 RNMTO43148 476 aaKnown RBP21.76■■□□□ 1.07
SSNA1-204ENST00000464553 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
SSNA1-204ENST00000464553 SLC52A2Q9HAB3 445 aa21.76■■□□□ 1.07
SSNA1-204ENST00000464553 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
SSNA1-204ENST00000464553 AK7Q96M32 723 aa21.75■■□□□ 1.07
SSNA1-204ENST00000464553 GNAT3A8MTJ3 354 aa21.74■■□□□ 1.07
SSNA1-204ENST00000464553 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
SSNA1-204ENST00000464553 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSNA1-204ENST00000464553 RSPH6AQ9H0K4 717 aa21.74■■□□□ 1.07
SSNA1-204ENST00000464553 SSFA2P28290 1259 aa21.73■■□□□ 1.07
SSNA1-204ENST00000464553 COL23A1Q86Y22 540 aaPredicted RBP21.73■■□□□ 1.07
SSNA1-204ENST00000464553 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
SSNA1-204ENST00000464553 POLD1P28340 1107 aa21.72■■□□□ 1.07
SSNA1-204ENST00000464553 PRKAR2BP31323 418 aa21.72■■□□□ 1.07
SSNA1-204ENST00000464553 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
SSNA1-204ENST00000464553 PNNQ9H307 717 aaKnown RBP21.72■■□□□ 1.07
SSNA1-204ENST00000464553 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
SSNA1-204ENST00000464553 ITPK1Q13572 414 aa21.71■■□□□ 1.07
SSNA1-204ENST00000464553 LINC00116Q8NCU8 138 aa21.71■■□□□ 1.07
SSNA1-204ENST00000464553 ARXQ96QS3 562 aa21.71■■□□□ 1.07
SSNA1-204ENST00000464553 C5P01031 1676 aa21.71■■□□□ 1.07
SSNA1-204ENST00000464553 MSH5O43196 834 aa21.69■■□□□ 1.06
SSNA1-204ENST00000464553 HTATSF1O43719 755 aaKnown RBP21.69■■□□□ 1.06
SSNA1-204ENST00000464553 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
SSNA1-204ENST00000464553 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
SSNA1-204ENST00000464553 MAP3K5Q99683 1374 aa21.69■■□□□ 1.06
SSNA1-204ENST00000464553 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
SSNA1-204ENST00000464553 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 NEFMP07197 916 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 ADRA2BP18089 450 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 MRC1P22897 1456 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 C4BP0C0L5 1744 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
SSNA1-204ENST00000464553 CNTNAP4Q9C0A0 1308 aa21.67■■□□□ 1.06
SSNA1-204ENST00000464553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.67■■□□□ 1.06
SSNA1-204ENST00000464553 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
SSNA1-204ENST00000464553 VSIG10Q8N0Z9 540 aa21.67■■□□□ 1.06
SSNA1-204ENST00000464553 IL17REQ8NFR9 667 aa21.67■■□□□ 1.06
SSNA1-204ENST00000464553 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
SSNA1-204ENST00000464553 TEFQ10587 303 aa21.66■■□□□ 1.06
SSNA1-204ENST00000464553 RTCBQ9Y3I0 505 aaKnown RBP21.66■■□□□ 1.06
SSNA1-204ENST00000464553 GNPATO15228 680 aa21.65■■□□□ 1.06
SSNA1-204ENST00000464553 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
SSNA1-204ENST00000464553 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
SSNA1-204ENST00000464553 MYBBP1AQ9BQG0 1328 aaKnown RBP21.64■■□□□ 1.05
SSNA1-204ENST00000464553 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
SSNA1-204ENST00000464553 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.05
SSNA1-204ENST00000464553 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.05
SSNA1-204ENST00000464553 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
SSNA1-204ENST00000464553 COL24A1Q17RW2 1714 aa21.63■■□□□ 1.05
SSNA1-204ENST00000464553 TTC5Q8N0Z6 440 aa21.62■■□□□ 1.05
SSNA1-204ENST00000464553 TEX13AQ9BXU3 409 aaPredicted RBP21.61■■□□□ 1.05
SSNA1-204ENST00000464553 TUBGCP6Q96RT7 1819 aa21.61■■□□□ 1.05
SSNA1-204ENST00000464553 PHF14O94880 888 aa21.6■■□□□ 1.05
SSNA1-204ENST00000464553 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
SSNA1-204ENST00000464553 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
SSNA1-204ENST00000464553 CRKLP46109 303 aaKnown RBP21.59■■□□□ 1.05
SSNA1-204ENST00000464553 SLC39A6Q13433 755 aa21.59■■□□□ 1.05
SSNA1-204ENST00000464553 AMIGO3Q86WK7 504 aa21.59■■□□□ 1.05
SSNA1-204ENST00000464553 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
SSNA1-204ENST00000464553 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.05
SSNA1-204ENST00000464553 UBR3Q6ZT12 1888 aa21.58■■□□□ 1.05
SSNA1-204ENST00000464553 ARHGEF1Q92888 912 aaKnown RBP21.58■■□□□ 1.05
SSNA1-204ENST00000464553 PRKRIP1Q9H875 184 aaPredicted RBP21.58■■□□□ 1.05
SSNA1-204ENST00000464553 STARD3NLO95772 234 aa21.57■■□□□ 1.04
SSNA1-204ENST00000464553 CYP19A1P11511 503 aaPredicted RBP21.57■■□□□ 1.04
SSNA1-204ENST00000464553 RFC4P35249 363 aa21.57■■□□□ 1.04
SSNA1-204ENST00000464553 INTS5Q6P9B9 1019 aaKnown RBP21.56■■□□□ 1.04
SSNA1-204ENST00000464553 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
SSNA1-204ENST00000464553 CCDC87Q9NVE4 849 aa21.56■■□□□ 1.04
SSNA1-204ENST00000464553 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
SSNA1-204ENST00000464553 BTBD11A6QL63 1104 aa21.55■■□□□ 1.04
SSNA1-204ENST00000464553 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
SSNA1-204ENST00000464553 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
SSNA1-204ENST00000464553 NFE2L2Q16236 605 aa21.54■■□□□ 1.04
SSNA1-204ENST00000464553 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
SSNA1-204ENST00000464553 COL5A3P25940 1745 aaPredicted RBP21.54■■□□□ 1.04
SSNA1-204ENST00000464553 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
SSNA1-204ENST00000464553 MAPK8IP3Q9UPT6 1336 aa21.54■■□□□ 1.04
SSNA1-204ENST00000464553 TAF7Q15545 349 aaPredicted RBP21.53■■□□□ 1.04
SSNA1-204ENST00000464553 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
SSNA1-204ENST00000464553 HEG1Q9ULI3 1381 aa21.52■■□□□ 1.04
SSNA1-204ENST00000464553 SMIM5Q71RC9 77 aa21.52■■□□□ 1.04
SSNA1-204ENST00000464553 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
SSNA1-204ENST00000464553 MCM10Q7L590 875 aa21.51■■□□□ 1.03
SSNA1-204ENST00000464553 GYS1P13807 737 aa21.5■■□□□ 1.03
SSNA1-204ENST00000464553 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
SSNA1-204ENST00000464553 VIRMAQ69YN4 1812 aaKnown RBP21.49■■□□□ 1.03
SSNA1-204ENST00000464553 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
SSNA1-204ENST00000464553 TJP1Q07157 1748 aa21.49■■□□□ 1.03
SSNA1-204ENST00000464553 ZPR1O75312 459 aa21.48■■□□□ 1.03
SSNA1-204ENST00000464553 USP42Q9H9J4 1324 aaKnown RBP21.48■■□□□ 1.03
SSNA1-204ENST00000464553 UBR2Q8IWV8 1755 aa21.48■■□□□ 1.03
SSNA1-204ENST00000464553 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
SSNA1-204ENST00000464553 SIPA1L3O60292 1781 aaPredicted RBP21.47■■□□□ 1.03
SSNA1-204ENST00000464553 A0A087WZG4 1122 aa21.47■■□□□ 1.03
SSNA1-204ENST00000464553 MMP10P09238 476 aa21.47■■□□□ 1.03
SSNA1-204ENST00000464553 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
SSNA1-204ENST00000464553 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms