RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 ITGA6P23229 1130 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 GTF2E1P29083 439 aaPredicted RBP9.02□□□□□ -0.97
PRKD3-206ENST00000464552 ATP1A2P50993 1020 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 TAS1R3Q7RTX0 852 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 SLC4A9Q96Q91 983 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 DYRK1BQ9Y463 629 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
PRKD3-206ENST00000464552 WIPF1O43516 503 aa9.01□□□□□ -0.97
PRKD3-206ENST00000464552 TLR1Q15399 786 aa9.01□□□□□ -0.97
PRKD3-206ENST00000464552 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
PRKD3-206ENST00000464552 MKRN1Q9UHC7 482 aaKnown RBP9.01□□□□□ -0.97
PRKD3-206ENST00000464552 SMTNP53814 917 aa9□□□□□ -0.97
PRKD3-206ENST00000464552 GNASQ5JWF2 1037 aa9□□□□□ -0.97
PRKD3-206ENST00000464552 TMEM214Q6NUQ4 689 aaKnown RBP9□□□□□ -0.97
PRKD3-206ENST00000464552 BACH1O14867 736 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
PRKD3-206ENST00000464552 CLDN10P78369 228 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 PSME1Q06323 249 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 MTFR1Q15390 333 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 LARGE2Q8N3Y3 721 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
PRKD3-206ENST00000464552 GMPRP36959 345 aa8.98□□□□□ -0.97
PRKD3-206ENST00000464552 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
PRKD3-206ENST00000464552 GMCL1Q96IK5 515 aa8.98□□□□□ -0.97
PRKD3-206ENST00000464552 TIMMDC1Q9NPL8 285 aa8.98□□□□□ -0.97
PRKD3-206ENST00000464552 DNAAF2Q9NVR5 837 aaKnown RBP8.98□□□□□ -0.97
PRKD3-206ENST00000464552 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
PRKD3-206ENST00000464552 A6NJY4 79 aa8.97□□□□□ -0.97
PRKD3-206ENST00000464552 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
PRKD3-206ENST00000464552 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
PRKD3-206ENST00000464552 ZNF358Q9NW07 568 aa8.97□□□□□ -0.97
PRKD3-206ENST00000464552 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 CCDC102BQ68D86 513 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 SV2AQ7L0J3 742 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 SIX5Q8N196 739 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
PRKD3-206ENST00000464552 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.98
PRKD3-206ENST00000464552 F11P03951 625 aa8.95□□□□□ -0.98
PRKD3-206ENST00000464552 LMOD1P29536 600 aaPredicted RBP8.95□□□□□ -0.98
PRKD3-206ENST00000464552 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
PRKD3-206ENST00000464552 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
PRKD3-206ENST00000464552 VWA5B2Q8N398 1253 aa8.95□□□□□ -0.98
PRKD3-206ENST00000464552 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
PRKD3-206ENST00000464552 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
PRKD3-206ENST00000464552 H7C1W4 665 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 M0R2N6 131 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 RASA1P20936 1047 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 PHKA2P46019 1235 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 CFAP70Q5T0N1 1121 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 GAS2L1Q99501 681 aaPredicted RBP8.94□□□□□ -0.98
PRKD3-206ENST00000464552 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
PRKD3-206ENST00000464552 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
PRKD3-206ENST00000464552 CDC14CA4D256 554 aa8.93□□□□□ -0.98
PRKD3-206ENST00000464552 DKK1O94907 266 aa8.93□□□□□ -0.98
PRKD3-206ENST00000464552 EPHA4P54764 986 aa8.93□□□□□ -0.98
PRKD3-206ENST00000464552 RIPOR1Q6ZS17 1223 aa8.93□□□□□ -0.98
PRKD3-206ENST00000464552 ZNF295-AS1Q8N0V1 137 aa8.93□□□□□ -0.98
PRKD3-206ENST00000464552 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
PRKD3-206ENST00000464552 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
PRKD3-206ENST00000464552 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
PRKD3-206ENST00000464552 INSM1Q01101 510 aaPredicted RBP8.92□□□□□ -0.98
PRKD3-206ENST00000464552 DBN1Q16643 649 aa8.92□□□□□ -0.98
PRKD3-206ENST00000464552 LARP1Q6PKG0 1096 aaKnown RBP8.92□□□□□ -0.98
PRKD3-206ENST00000464552 ZNF837Q96EG3 531 aaPredicted RBP8.92□□□□□ -0.98
PRKD3-206ENST00000464552 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
PRKD3-206ENST00000464552 FAM196BA6NMK8 535 aa8.91□□□□□ -0.98
PRKD3-206ENST00000464552 FOXK2Q01167 660 aa8.91□□□□□ -0.98
PRKD3-206ENST00000464552 PTK7Q13308 1070 aa8.91□□□□□ -0.98
PRKD3-206ENST00000464552 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
PRKD3-206ENST00000464552 LBRQ14739 615 aaKnown RBP8.9□□□□□ -0.98
PRKD3-206ENST00000464552 C14orf37Q86TY3 774 aa8.9□□□□□ -0.98
PRKD3-206ENST00000464552 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
PRKD3-206ENST00000464552 C1orf216Q8TAB5 229 aa8.9□□□□□ -0.98
PRKD3-206ENST00000464552 MSX1P28360 303 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 SEC13P55735 322 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
PRKD3-206ENST00000464552 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
PRKD3-206ENST00000464552 CABP1Q9NZU7 370 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
PRKD3-206ENST00000464552 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L11C9JVI0 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L21D6R901 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L18D6R9N7 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L22D6RA61 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L17D6RBQ6 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L19D6RCP7 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L20D6RJB6 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 USP17L24Q0WX57 530 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 TEAD4Q15561 434 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
PRKD3-206ENST00000464552 NUCKS1Q9H1E3 243 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms