RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 FBLN1P23142 703 aa17.73■□□□□ 0.43
SLC13A3-208ENST00000464518 TOMM70O94826 608 aa17.72■□□□□ 0.43
SLC13A3-208ENST00000464518 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
SLC13A3-208ENST00000464518 TONSLQ96HA7 1378 aa17.71■□□□□ 0.43
SLC13A3-208ENST00000464518 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
SLC13A3-208ENST00000464518 TGFB2P61812 414 aa17.71■□□□□ 0.43
SLC13A3-208ENST00000464518 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
SLC13A3-208ENST00000464518 SIK1P57059 783 aa17.7■□□□□ 0.42
SLC13A3-208ENST00000464518 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
SLC13A3-208ENST00000464518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
SLC13A3-208ENST00000464518 ZNF831Q5JPB2 1677 aa17.7■□□□□ 0.42
SLC13A3-208ENST00000464518 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 PHF14O94880 888 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 PIGBQ92521 554 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
SLC13A3-208ENST00000464518 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
SLC13A3-208ENST00000464518 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
SLC13A3-208ENST00000464518 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
SLC13A3-208ENST00000464518 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
SLC13A3-208ENST00000464518 TMF1P82094 1093 aa17.66■□□□□ 0.42
SLC13A3-208ENST00000464518 DNAJC5GQ8N7S2 189 aa17.66■□□□□ 0.42
SLC13A3-208ENST00000464518 GNPATO15228 680 aa17.65■□□□□ 0.42
SLC13A3-208ENST00000464518 TMOD3Q9NYL9 352 aa17.65■□□□□ 0.42
SLC13A3-208ENST00000464518 WDR90Q96KV7 1748 aa17.64■□□□□ 0.41
SLC13A3-208ENST00000464518 ZBTB22O15209 634 aa17.64■□□□□ 0.41
SLC13A3-208ENST00000464518 MMP10P09238 476 aa17.64■□□□□ 0.41
SLC13A3-208ENST00000464518 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
SLC13A3-208ENST00000464518 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
SLC13A3-208ENST00000464518 BRCA1P38398 1863 aaKnown RBP17.63■□□□□ 0.41
SLC13A3-208ENST00000464518 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
SLC13A3-208ENST00000464518 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
SLC13A3-208ENST00000464518 KDRP35968 1356 aa17.63■□□□□ 0.41
SLC13A3-208ENST00000464518 IFNL2Q8IZJ0 200 aa17.62■□□□□ 0.41
SLC13A3-208ENST00000464518 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
SLC13A3-208ENST00000464518 C4AP0C0L4 1744 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 N4BP2Q86UW6 1770 aaPredicted RBP17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 ITPK1Q13572 414 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 BCS1LQ9Y276 419 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
SLC13A3-208ENST00000464518 FSTL1Q12841 308 aa17.6■□□□□ 0.41
SLC13A3-208ENST00000464518 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
SLC13A3-208ENST00000464518 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
SLC13A3-208ENST00000464518 WWC3Q9ULE0 1092 aa17.6■□□□□ 0.41
SLC13A3-208ENST00000464518 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
SLC13A3-208ENST00000464518 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 PHKG2P15735 406 aa17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
SLC13A3-208ENST00000464518 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
SLC13A3-208ENST00000464518 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
SLC13A3-208ENST00000464518 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
SLC13A3-208ENST00000464518 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 TNRC6CQ9HCJ0 1690 aaKnown RBP17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 FCHSD2O94868 740 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 ARHGAP27Q6ZUM4 889 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 EYA1Q99502 592 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 NMRK2Q9NPI5 230 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
SLC13A3-208ENST00000464518 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
SLC13A3-208ENST00000464518 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
SLC13A3-208ENST00000464518 GYS1P13807 737 aa17.55■□□□□ 0.4
SLC13A3-208ENST00000464518 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
SLC13A3-208ENST00000464518 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
SLC13A3-208ENST00000464518 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
SLC13A3-208ENST00000464518 DPEP1P16444 411 aa17.54■□□□□ 0.4
SLC13A3-208ENST00000464518 RFC4P35249 363 aa17.54■□□□□ 0.4
SLC13A3-208ENST00000464518 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
SLC13A3-208ENST00000464518 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
SLC13A3-208ENST00000464518 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
SLC13A3-208ENST00000464518 PIM2Q9P1W9 311 aa17.53■□□□□ 0.4
SLC13A3-208ENST00000464518 KCNA3P22001 575 aa17.52■□□□□ 0.4
SLC13A3-208ENST00000464518 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
SLC13A3-208ENST00000464518 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
SLC13A3-208ENST00000464518 SLC4A9Q96Q91 983 aa17.5■□□□□ 0.39
SLC13A3-208ENST00000464518 KCPQ6ZWJ8 1503 aa17.5■□□□□ 0.39
SLC13A3-208ENST00000464518 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SLC13A3-208ENST00000464518 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
SLC13A3-208ENST00000464518 SMC1BQ8NDV3 1235 aa17.48■□□□□ 0.39
SLC13A3-208ENST00000464518 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
SLC13A3-208ENST00000464518 COL13A1Q5TAT6 717 aaPredicted RBP17.47■□□□□ 0.39
SLC13A3-208ENST00000464518 MYH14Q7Z406 1995 aaKnown RBP17.47■□□□□ 0.39
SLC13A3-208ENST00000464518 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
SLC13A3-208ENST00000464518 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
SLC13A3-208ENST00000464518 SBF1O95248 1867 aa17.46■□□□□ 0.39
SLC13A3-208ENST00000464518 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
SLC13A3-208ENST00000464518 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
SLC13A3-208ENST00000464518 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
SLC13A3-208ENST00000464518 PRELPP51888 382 aa17.44■□□□□ 0.38
SLC13A3-208ENST00000464518 CABP4P57796 275 aa17.44■□□□□ 0.38
SLC13A3-208ENST00000464518 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
SLC13A3-208ENST00000464518 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
SLC13A3-208ENST00000464518 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms