RNA–Protein interactions for RNA: ENST00000464393.1

CIR1-204, Transcript of corepressor interacting with RBPJ, 1, humanhuman

TSL 2

Gene CIR1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-204ENST00000464393 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
CIR1-204ENST00000464393 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
CIR1-204ENST00000464393 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
CIR1-204ENST00000464393 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
CIR1-204ENST00000464393 SMTNP53814 917 aa11.71□□□□□ -0.53
CIR1-204ENST00000464393 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
CIR1-204ENST00000464393 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
CIR1-204ENST00000464393 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
CIR1-204ENST00000464393 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.53
CIR1-204ENST00000464393 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
CIR1-204ENST00000464393 RFX1P22670 979 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 PTSQ03393 145 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 PTK7Q13308 1070 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 MTFR1Q15390 333 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 TLR1Q15399 786 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 CRTC2Q53ET0 693 aaPredicted RBP11.7□□□□□ -0.54
CIR1-204ENST00000464393 NXF1Q9UBU9 619 aaKnown RBP11.7□□□□□ -0.54
CIR1-204ENST00000464393 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
CIR1-204ENST00000464393 SLC35F4A4IF30 521 aa11.69□□□□□ -0.54
CIR1-204ENST00000464393 BACH1O14867 736 aa11.69□□□□□ -0.54
CIR1-204ENST00000464393 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
CIR1-204ENST00000464393 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
CIR1-204ENST00000464393 NPAS3Q8IXF0 933 aa11.69□□□□□ -0.54
CIR1-204ENST00000464393 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
CIR1-204ENST00000464393 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L21D6R901 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 POU4F2Q12837 409 aa11.68□□□□□ -0.54
CIR1-204ENST00000464393 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
CIR1-204ENST00000464393 A6NJY4 79 aa11.67□□□□□ -0.54
CIR1-204ENST00000464393 M0R2N6 131 aa11.67□□□□□ -0.54
CIR1-204ENST00000464393 RHOQP17081 205 aa11.67□□□□□ -0.54
CIR1-204ENST00000464393 EPHA4P54764 986 aa11.67□□□□□ -0.54
CIR1-204ENST00000464393 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
CIR1-204ENST00000464393 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
CIR1-204ENST00000464393 TERTO14746 1132 aaKnown RBP11.66□□□□□ -0.54
CIR1-204ENST00000464393 TAS1R3Q7RTX0 852 aa11.66□□□□□ -0.54
CIR1-204ENST00000464393 IQSEC3Q9UPP2 1182 aaPredicted RBP11.66□□□□□ -0.54
CIR1-204ENST00000464393 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
CIR1-204ENST00000464393 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
CIR1-204ENST00000464393 TMEM214Q6NUQ4 689 aaKnown RBP11.65□□□□□ -0.54
CIR1-204ENST00000464393 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.54
CIR1-204ENST00000464393 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
CIR1-204ENST00000464393 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
CIR1-204ENST00000464393 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
CIR1-204ENST00000464393 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 ARXQ96QS3 562 aa11.64□□□□□ -0.55
CIR1-204ENST00000464393 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
CIR1-204ENST00000464393 H3BM21 787 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
CIR1-204ENST00000464393 SEC13P55735 322 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 FOXK2Q01167 660 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 DPYDQ12882 1025 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 GNASQ5JWF2 1037 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 PBXIP1Q96AQ6 731 aa11.63□□□□□ -0.55
CIR1-204ENST00000464393 RBM19Q9Y4C8 960 aaKnown RBP11.63□□□□□ -0.55
CIR1-204ENST00000464393 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
CIR1-204ENST00000464393 DYRK1BQ9Y463 629 aa11.62□□□□□ -0.55
CIR1-204ENST00000464393 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
CIR1-204ENST00000464393 ELOAQ14241 798 aaKnown RBP11.61□□□□□ -0.55
CIR1-204ENST00000464393 ATG7O95352 703 aa11.6□□□□□ -0.55
CIR1-204ENST00000464393 VEGFBP49765 207 aa11.6□□□□□ -0.55
CIR1-204ENST00000464393 TSEN2Q8NCE0 465 aaKnown RBP11.6□□□□□ -0.55
CIR1-204ENST00000464393 TIMMDC1Q9NPL8 285 aa11.6□□□□□ -0.55
CIR1-204ENST00000464393 PHKA2P46019 1235 aa11.59□□□□□ -0.55
CIR1-204ENST00000464393 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
CIR1-204ENST00000464393 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
CIR1-204ENST00000464393 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
CIR1-204ENST00000464393 ITGA6P23229 1130 aa11.58□□□□□ -0.56
CIR1-204ENST00000464393 SLC16A10Q8TF71 515 aa11.58□□□□□ -0.56
CIR1-204ENST00000464393 NOVA2Q9UNW9 492 aaKnown RBP11.58□□□□□ -0.56
CIR1-204ENST00000464393 WFS1O76024 890 aa11.57□□□□□ -0.56
CIR1-204ENST00000464393 VSIG8P0DPA2 414 aa11.57□□□□□ -0.56
CIR1-204ENST00000464393 LCE2CQ5TA81 110 aa11.57□□□□□ -0.56
CIR1-204ENST00000464393 SLC9A9Q8IVB4 645 aa11.57□□□□□ -0.56
CIR1-204ENST00000464393 ZMIZ1Q9ULJ6 1067 aa11.57□□□□□ -0.56
CIR1-204ENST00000464393 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
CIR1-204ENST00000464393 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
CIR1-204ENST00000464393 NANOS1Q8WY41 292 aaKnown RBP11.56□□□□□ -0.56
CIR1-204ENST00000464393 TSPAN10Q9H1Z9 355 aaPredicted RBP11.56□□□□□ -0.56
CIR1-204ENST00000464393 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
CIR1-204ENST00000464393 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
CIR1-204ENST00000464393 TEAD4Q15561 434 aa11.55□□□□□ -0.56
CIR1-204ENST00000464393 ZDHHC1Q8WTX9 485 aa11.55□□□□□ -0.56
CIR1-204ENST00000464393 CUEDC1Q9NWM3 386 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms