RNA–Protein interactions for RNA: ENST00000464393.1

CIR1-204, Transcript of corepressor interacting with RBPJ, 1, humanhuman

TSL 2

Gene CIR1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-204ENST00000464393 AEBP2Q6ZN18 517 aaPredicted RBP32.71■■■□□ 2.83
CIR1-204ENST00000464393 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
CIR1-204ENST00000464393 PHF23Q9BUL5 403 aaPredicted RBP28.08■■■□□ 2.09
CIR1-204ENST00000464393 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
CIR1-204ENST00000464393 PLPPR3Q6T4P5 718 aa25.89■■□□□ 1.74
CIR1-204ENST00000464393 FOXD1Q16676 465 aa25.75■■□□□ 1.71
CIR1-204ENST00000464393 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
CIR1-204ENST00000464393 ADRA2BP18089 450 aa24.72■■□□□ 1.55
CIR1-204ENST00000464393 PIAS4Q8N2W9 510 aaPredicted RBP24.24■■□□□ 1.47
CIR1-204ENST00000464393 MSH5O43196 834 aa23.75■■□□□ 1.39
CIR1-204ENST00000464393 PPP4R3CPQ6ZMV5 832 aa22.8■■□□□ 1.24
CIR1-204ENST00000464393 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
CIR1-204ENST00000464393 MAPK8IP2Q13387 824 aaPredicted RBP22.43■■□□□ 1.18
CIR1-204ENST00000464393 KCNA4P22459 653 aa22.25■■□□□ 1.15
CIR1-204ENST00000464393 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
CIR1-204ENST00000464393 CNKSR2Q8WXI2 1034 aa22.18■■□□□ 1.14
CIR1-204ENST00000464393 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
CIR1-204ENST00000464393 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
CIR1-204ENST00000464393 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
CIR1-204ENST00000464393 HOXD11P31277 338 aaPredicted RBP21.71■■□□□ 1.07
CIR1-204ENST00000464393 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
CIR1-204ENST00000464393 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
CIR1-204ENST00000464393 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
CIR1-204ENST00000464393 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
CIR1-204ENST00000464393 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
CIR1-204ENST00000464393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
CIR1-204ENST00000464393 ZBTB22O15209 634 aa20.49■□□□□ 0.87
CIR1-204ENST00000464393 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
CIR1-204ENST00000464393 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
CIR1-204ENST00000464393 RNF39Q9H2S5 420 aa20.37■□□□□ 0.85
CIR1-204ENST00000464393 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
CIR1-204ENST00000464393 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
CIR1-204ENST00000464393 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
CIR1-204ENST00000464393 C1QBPQ07021 282 aaKnown RBP20.12■□□□□ 0.81
CIR1-204ENST00000464393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
CIR1-204ENST00000464393 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
CIR1-204ENST00000464393 SAMD1Q6SPF0 538 aaPredicted RBP19.97■□□□□ 0.79
CIR1-204ENST00000464393 APLP2Q06481 763 aa19.82■□□□□ 0.76
CIR1-204ENST00000464393 ATXN8OSP0DMR3 200 aa19.81■□□□□ 0.76
CIR1-204ENST00000464393 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
CIR1-204ENST00000464393 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
CIR1-204ENST00000464393 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
CIR1-204ENST00000464393 CAPN15O75808 1086 aa19.63■□□□□ 0.73
CIR1-204ENST00000464393 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
CIR1-204ENST00000464393 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
CIR1-204ENST00000464393 DSG3P32926 999 aa19.36■□□□□ 0.69
CIR1-204ENST00000464393 ABCB7O75027 752 aa19.25■□□□□ 0.67
CIR1-204ENST00000464393 POLA2Q14181 598 aa19.23■□□□□ 0.67
CIR1-204ENST00000464393 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
CIR1-204ENST00000464393 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
CIR1-204ENST00000464393 FBLN2P98095 1184 aa18.82■□□□□ 0.6
CIR1-204ENST00000464393 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
CIR1-204ENST00000464393 SPDYE2BA6NHP3 402 aa18.43■□□□□ 0.54
CIR1-204ENST00000464393 SPDYE6P0CI01 402 aa18.43■□□□□ 0.54
CIR1-204ENST00000464393 SPDYE2Q495Y8 402 aa18.43■□□□□ 0.54
CIR1-204ENST00000464393 RBM42Q9BTD8 480 aaKnown RBP18.43■□□□□ 0.54
CIR1-204ENST00000464393 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
CIR1-204ENST00000464393 FKBP8Q14318 412 aa18.35■□□□□ 0.53
CIR1-204ENST00000464393 ZNF692Q9BU19 519 aaPredicted RBP18.31■□□□□ 0.52
CIR1-204ENST00000464393 SSUH2Q9Y2M2 353 aa18.31■□□□□ 0.52
CIR1-204ENST00000464393 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
CIR1-204ENST00000464393 PROM2Q8N271 834 aa18.14■□□□□ 0.49
CIR1-204ENST00000464393 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
CIR1-204ENST00000464393 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
CIR1-204ENST00000464393 SPDYE1Q8NFV5 336 aaPredicted RBP17.88■□□□□ 0.45
CIR1-204ENST00000464393 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
CIR1-204ENST00000464393 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
CIR1-204ENST00000464393 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
CIR1-204ENST00000464393 FBXO3Q9UK99 471 aa17.72■□□□□ 0.43
CIR1-204ENST00000464393 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
CIR1-204ENST00000464393 PRR29P0C7W0 189 aa17.61■□□□□ 0.41
CIR1-204ENST00000464393 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.4
CIR1-204ENST00000464393 VASPP50552 380 aaPredicted RBP17.49■□□□□ 0.39
CIR1-204ENST00000464393 PIP4P2Q8N4L2 257 aa17.46■□□□□ 0.39
CIR1-204ENST00000464393 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
CIR1-204ENST00000464393 MIER1Q8N108 512 aa17.39■□□□□ 0.37
CIR1-204ENST00000464393 PLCD3Q8N3E9 789 aa17.36■□□□□ 0.37
CIR1-204ENST00000464393 PRKAR2AP13861 404 aaKnown RBP17.35■□□□□ 0.37
CIR1-204ENST00000464393 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
CIR1-204ENST00000464393 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
CIR1-204ENST00000464393 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
CIR1-204ENST00000464393 IFNLR1Q8IU57 520 aaPredicted RBP17.26■□□□□ 0.35
CIR1-204ENST00000464393 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.35
CIR1-204ENST00000464393 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
CIR1-204ENST00000464393 POTEHQ6S545 545 aa17.15■□□□□ 0.34
CIR1-204ENST00000464393 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
CIR1-204ENST00000464393 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
CIR1-204ENST00000464393 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
CIR1-204ENST00000464393 NUBP1P53384 320 aa17.02■□□□□ 0.32
CIR1-204ENST00000464393 C19orf67A6NJJ6 358 aa16.93■□□□□ 0.3
CIR1-204ENST00000464393 RASEFQ8IZ41 740 aa16.93■□□□□ 0.3
CIR1-204ENST00000464393 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
CIR1-204ENST00000464393 HAX1O00165 279 aa16.85■□□□□ 0.29
CIR1-204ENST00000464393 FAM212AQ96EL1 285 aa16.83■□□□□ 0.28
CIR1-204ENST00000464393 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
CIR1-204ENST00000464393 GSE1Q14687 1217 aa16.79■□□□□ 0.28
CIR1-204ENST00000464393 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
CIR1-204ENST00000464393 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
CIR1-204ENST00000464393 EVX2Q03828 476 aa16.76■□□□□ 0.27
CIR1-204ENST00000464393 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms