RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
SNX17-205ENST00000464279 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
SNX17-205ENST00000464279 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
SNX17-205ENST00000464279 TMF1P82094 1093 aa17.89■□□□□ 0.45
SNX17-205ENST00000464279 LOC102724428A0A0B4J2F2 783 aa17.88■□□□□ 0.45
SNX17-205ENST00000464279 CCDC85CA6NKD9 419 aa17.88■□□□□ 0.45
SNX17-205ENST00000464279 SIK1P57059 783 aa17.88■□□□□ 0.45
SNX17-205ENST00000464279 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
SNX17-205ENST00000464279 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
SNX17-205ENST00000464279 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
SNX17-205ENST00000464279 WBP1LQ9NX94 342 aa17.86■□□□□ 0.45
SNX17-205ENST00000464279 SBF1O95248 1867 aa17.86■□□□□ 0.45
SNX17-205ENST00000464279 HOXC9P31274 260 aa17.85■□□□□ 0.45
SNX17-205ENST00000464279 RASSF7Q02833 373 aa17.85■□□□□ 0.45
SNX17-205ENST00000464279 CD163L1Q9NR16 1453 aa17.84■□□□□ 0.45
SNX17-205ENST00000464279 TATP17735 454 aaPredicted RBP17.84■□□□□ 0.45
SNX17-205ENST00000464279 LMNB1P20700 586 aa17.84■□□□□ 0.45
SNX17-205ENST00000464279 ITPK1Q13572 414 aa17.84■□□□□ 0.45
SNX17-205ENST00000464279 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
SNX17-205ENST00000464279 PIGBQ92521 554 aa17.84■□□□□ 0.45
SNX17-205ENST00000464279 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
SNX17-205ENST00000464279 EDC4Q6P2E9 1401 aaKnown RBP17.83■□□□□ 0.45
SNX17-205ENST00000464279 MAP3K19Q56UN5 1328 aa17.83■□□□□ 0.44
SNX17-205ENST00000464279 HSPA8P11142 646 aaKnown RBP17.83■□□□□ 0.44
SNX17-205ENST00000464279 AMPHP49418 695 aa17.83■□□□□ 0.44
SNX17-205ENST00000464279 CHADLQ6NUI6 762 aa17.83■□□□□ 0.44
SNX17-205ENST00000464279 USHBP1Q8N6Y0 703 aa17.83■□□□□ 0.44
SNX17-205ENST00000464279 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.44
SNX17-205ENST00000464279 VEGFBP49765 207 aa17.82■□□□□ 0.44
SNX17-205ENST00000464279 NBPF6Q5VWK0 638 aa17.82■□□□□ 0.44
SNX17-205ENST00000464279 NBPF4Q96M43 638 aa17.82■□□□□ 0.44
SNX17-205ENST00000464279 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
SNX17-205ENST00000464279 POTECB2RU33 542 aa17.81■□□□□ 0.44
SNX17-205ENST00000464279 GYS1P13807 737 aa17.81■□□□□ 0.44
SNX17-205ENST00000464279 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
SNX17-205ENST00000464279 ITGB4P16144 1822 aa17.8■□□□□ 0.44
SNX17-205ENST00000464279 CYP27B1O15528 508 aa17.8■□□□□ 0.44
SNX17-205ENST00000464279 ADRA2BP18089 450 aa17.8■□□□□ 0.44
SNX17-205ENST00000464279 CHRNA5P30532 468 aa17.8■□□□□ 0.44
SNX17-205ENST00000464279 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
SNX17-205ENST00000464279 TIAM2Q8IVF5 1701 aa17.79■□□□□ 0.44
SNX17-205ENST00000464279 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
SNX17-205ENST00000464279 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
SNX17-205ENST00000464279 RFC4P35249 363 aa17.77■□□□□ 0.44
SNX17-205ENST00000464279 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
SNX17-205ENST00000464279 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
SNX17-205ENST00000464279 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.43
SNX17-205ENST00000464279 PASKQ96RG2 1323 aa17.75■□□□□ 0.43
SNX17-205ENST00000464279 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
SNX17-205ENST00000464279 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SNX17-205ENST00000464279 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
SNX17-205ENST00000464279 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
SNX17-205ENST00000464279 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
SNX17-205ENST00000464279 VIRMAQ69YN4 1812 aaKnown RBP17.74■□□□□ 0.43
SNX17-205ENST00000464279 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
SNX17-205ENST00000464279 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
SNX17-205ENST00000464279 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
SNX17-205ENST00000464279 COG3Q96JB2 828 aa17.73■□□□□ 0.43
SNX17-205ENST00000464279 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
SNX17-205ENST00000464279 KDRP35968 1356 aa17.72■□□□□ 0.43
SNX17-205ENST00000464279 DDR1Q08345 913 aa17.72■□□□□ 0.43
SNX17-205ENST00000464279 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
SNX17-205ENST00000464279 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
SNX17-205ENST00000464279 TERF2IPQ9NYB0 399 aa17.72■□□□□ 0.43
SNX17-205ENST00000464279 FBLN1P23142 703 aa17.71■□□□□ 0.43
SNX17-205ENST00000464279 RC3H1Q5TC82 1133 aaKnown RBP17.71■□□□□ 0.43
SNX17-205ENST00000464279 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
SNX17-205ENST00000464279 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
SNX17-205ENST00000464279 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
SNX17-205ENST00000464279 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
SNX17-205ENST00000464279 NFKBIEO00221 500 aa17.68■□□□□ 0.42
SNX17-205ENST00000464279 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
SNX17-205ENST00000464279 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
SNX17-205ENST00000464279 FKBP8Q14318 412 aa17.67■□□□□ 0.42
SNX17-205ENST00000464279 RRS1Q15050 365 aaKnown RBP17.67■□□□□ 0.42
SNX17-205ENST00000464279 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
SNX17-205ENST00000464279 DEFB115Q30KQ5 88 aa17.66■□□□□ 0.42
SNX17-205ENST00000464279 ERFEQ4G0M1 354 aa17.66■□□□□ 0.42
SNX17-205ENST00000464279 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
SNX17-205ENST00000464279 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
SNX17-205ENST00000464279 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
SNX17-205ENST00000464279 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
SNX17-205ENST00000464279 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
SNX17-205ENST00000464279 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
SNX17-205ENST00000464279 SLC4A9Q96Q91 983 aa17.65■□□□□ 0.42
SNX17-205ENST00000464279 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
SNX17-205ENST00000464279 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.42
SNX17-205ENST00000464279 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.42
SNX17-205ENST00000464279 IQCA1LA6NCM1 817 aa17.64■□□□□ 0.41
SNX17-205ENST00000464279 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
SNX17-205ENST00000464279 INSRP06213 1382 aa17.64■□□□□ 0.41
SNX17-205ENST00000464279 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
SNX17-205ENST00000464279 ITGBL1O95965 494 aaPredicted RBP17.63■□□□□ 0.41
SNX17-205ENST00000464279 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
SNX17-205ENST00000464279 DDNO94850 711 aaPredicted RBP17.62■□□□□ 0.41
SNX17-205ENST00000464279 PRPF38BQ5VTL8 546 aaKnown RBP17.62■□□□□ 0.41
SNX17-205ENST00000464279 THSD7BQ9C0I4 1608 aa17.61■□□□□ 0.41
SNX17-205ENST00000464279 CCDC88AQ3V6T2 1871 aa17.61■□□□□ 0.41
SNX17-205ENST00000464279 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
SNX17-205ENST00000464279 ABT1Q9ULW3 272 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms