RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
TUBGCP3-204ENST00000464139 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
TUBGCP3-204ENST00000464139 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
TUBGCP3-204ENST00000464139 EXOC6BQ9Y2D4 811 aa25.25■■□□□ 1.63
TUBGCP3-204ENST00000464139 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
TUBGCP3-204ENST00000464139 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
TUBGCP3-204ENST00000464139 SDSP20132 328 aa25.24■■□□□ 1.63
TUBGCP3-204ENST00000464139 CACNA1FO60840 1977 aa25.24■■□□□ 1.63
TUBGCP3-204ENST00000464139 KCNQ3O43525 872 aa25.23■■□□□ 1.63
TUBGCP3-204ENST00000464139 GNAI3P08754 354 aa25.23■■□□□ 1.63
TUBGCP3-204ENST00000464139 CHMP5Q9NZZ3 219 aa25.23■■□□□ 1.63
TUBGCP3-204ENST00000464139 MPRIPQ6WCQ1 1025 aa25.23■■□□□ 1.63
TUBGCP3-204ENST00000464139 PNMA6EA0A0J9YXQ4 647 aa25.22■■□□□ 1.63
TUBGCP3-204ENST00000464139 CD2BP2O95400 341 aaKnown RBP25.22■■□□□ 1.63
TUBGCP3-204ENST00000464139 EIF4A1P60842 406 aaKnown RBP25.22■■□□□ 1.63
TUBGCP3-204ENST00000464139 KRT28Q7Z3Y7 464 aa25.21■■□□□ 1.63
TUBGCP3-204ENST00000464139 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
TUBGCP3-204ENST00000464139 LRRFIP2Q9Y608 721 aaKnown RBP25.21■■□□□ 1.63
TUBGCP3-204ENST00000464139 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
TUBGCP3-204ENST00000464139 ANKRD24Q8TF21 1146 aa25.2■■□□□ 1.62
TUBGCP3-204ENST00000464139 HSP90AB1P08238 724 aaKnown RBP25.2■■□□□ 1.62
TUBGCP3-204ENST00000464139 TEFQ10587 303 aa25.2■■□□□ 1.62
TUBGCP3-204ENST00000464139 USP44Q9H0E7 712 aa25.2■■□□□ 1.62
TUBGCP3-204ENST00000464139 PHRF1Q9P1Y6 1649 aaKnown RBP25.19■■□□□ 1.62
TUBGCP3-204ENST00000464139 ATP8B2P98198 1209 aa25.19■■□□□ 1.62
TUBGCP3-204ENST00000464139 AXIN2Q9Y2T1 843 aa25.19■■□□□ 1.62
TUBGCP3-204ENST00000464139 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
TUBGCP3-204ENST00000464139 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
TUBGCP3-204ENST00000464139 MED1Q15648 1581 aaPredicted RBP25.18■■□□□ 1.62
TUBGCP3-204ENST00000464139 SLIT3O75094 1523 aa25.17■■□□□ 1.62
TUBGCP3-204ENST00000464139 PDE1AP54750 535 aa25.17■■□□□ 1.62
TUBGCP3-204ENST00000464139 CHPF2Q9P2E5 772 aa25.17■■□□□ 1.62
TUBGCP3-204ENST00000464139 TSHZ3Q63HK5 1081 aa25.17■■□□□ 1.62
TUBGCP3-204ENST00000464139 PXDNQ92626 1479 aa25.16■■□□□ 1.62
TUBGCP3-204ENST00000464139 ANXA1P04083 346 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 USP26Q9BXU7 913 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 UBTFL1P0CB47 393 aaPredicted RBP25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 AMOTQ4VCS5 1084 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 LRRCC1Q9C099 1032 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 LMO7Q8WWI1 1683 aa25.15■■□□□ 1.62
TUBGCP3-204ENST00000464139 MCM4P33991 863 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 DDIT3P35638 169 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 FOXD4L1Q9NU39 408 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 KDM3BQ7LBC6 1761 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 PXDNLA1KZ92 1463 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 C1orf167Q5SNV9 1468 aa25.14■■□□□ 1.62
TUBGCP3-204ENST00000464139 RNMTO43148 476 aaKnown RBP25.14■■□□□ 1.61
TUBGCP3-204ENST00000464139 OSBPL3Q9H4L5 887 aa25.14■■□□□ 1.61
TUBGCP3-204ENST00000464139 C19orf44Q9H6X5 657 aa25.14■■□□□ 1.61
TUBGCP3-204ENST00000464139 CASC1Q6TDU7 716 aa25.13■■□□□ 1.61
TUBGCP3-204ENST00000464139 TRPM3Q9HCF6 1732 aaPredicted RBP25.13■■□□□ 1.61
TUBGCP3-204ENST00000464139 ZC3H6P61129 1189 aaKnown RBP25.13■■□□□ 1.61
TUBGCP3-204ENST00000464139 SRCIN1Q9C0H9 1055 aa25.12■■□□□ 1.61
TUBGCP3-204ENST00000464139 K7ELQ4 463 aaPredicted RBP25.12■■□□□ 1.61
TUBGCP3-204ENST00000464139 N4BP2Q86UW6 1770 aaPredicted RBP25.12■■□□□ 1.61
TUBGCP3-204ENST00000464139 EIF5BO60841 1220 aaKnown RBP25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 HOXB7P09629 217 aa25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 IBTKQ9P2D0 1353 aaPredicted RBP25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 PI4KAP2A4QPH2 592 aa25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 HSP90AA1P07900 732 aaKnown RBP25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 PI4KAP1Q8N8J0 262 aa25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 DDX17Q92841 729 aaKnown RBP25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 SALL3Q9BXA9 1300 aa25.11■■□□□ 1.61
TUBGCP3-204ENST00000464139 NCAPD2Q15021 1401 aa25.1■■□□□ 1.61
TUBGCP3-204ENST00000464139 RGPD5Q99666 1765 aa25.09■■□□□ 1.61
TUBGCP3-204ENST00000464139 MX1P20591 662 aa25.08■■□□□ 1.61
TUBGCP3-204ENST00000464139 DNAAF4Q8WXU2 420 aa25.08■■□□□ 1.61
TUBGCP3-204ENST00000464139 NBPF7P0C2Y1 421 aaPredicted RBP25.08■■□□□ 1.61
TUBGCP3-204ENST00000464139 RABEP1Q15276 862 aa25.07■■□□□ 1.6
TUBGCP3-204ENST00000464139 BEND3Q5T5X7 828 aa25.07■■□□□ 1.6
TUBGCP3-204ENST00000464139 PPP1R42Q7Z4L9 355 aa25.07■■□□□ 1.6
TUBGCP3-204ENST00000464139 SSH3Q8TE77 659 aa25.07■■□□□ 1.6
TUBGCP3-204ENST00000464139 PRAMEF22A3QJZ6 481 aa25.06■■□□□ 1.6
TUBGCP3-204ENST00000464139 IL1RAPL2Q9NP60 686 aa25.06■■□□□ 1.6
TUBGCP3-204ENST00000464139 ERC2O15083 957 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 ATF3P18847 181 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 KIF1AQ12756 1690 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 ERBB3P21860 1342 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 REC8O95072 547 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 CHMP4AQ9BY43 222 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 BRPF3Q9ULD4 1205 aa25.05■■□□□ 1.6
TUBGCP3-204ENST00000464139 GIGYF1O75420 1035 aaPredicted RBP25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 PROSER3Q2NL68 480 aa25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 IL27Q8NEV9 243 aa25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 TNPO1Q92973 898 aaKnown RBP25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 ADCY9O60503 1353 aa25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 DBF4Q9UBU7 674 aaPredicted RBP25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 CIZ1Q9ULV3 898 aaPredicted RBP25.04■■□□□ 1.6
TUBGCP3-204ENST00000464139 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
TUBGCP3-204ENST00000464139 TMEM94Q12767 1356 aa25.03■■□□□ 1.6
TUBGCP3-204ENST00000464139 SRGAP3O43295 1099 aa25.03■■□□□ 1.6
TUBGCP3-204ENST00000464139 TRIM6-TRIM34B2RNG4 842 aa25.02■■□□□ 1.6
TUBGCP3-204ENST00000464139 RILPL2Q969X0 211 aa25.02■■□□□ 1.6
TUBGCP3-204ENST00000464139 NLRP2Q9NX02 1062 aa25.02■■□□□ 1.6
TUBGCP3-204ENST00000464139 CAMTA1Q9Y6Y1 1673 aa25.02■■□□□ 1.6
TUBGCP3-204ENST00000464139 POLA2Q14181 598 aa25.02■■□□□ 1.6
TUBGCP3-204ENST00000464139 NUTM1Q86Y26 1132 aa25.01■■□□□ 1.59
TUBGCP3-204ENST00000464139 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
TUBGCP3-204ENST00000464139 RAB3GAP1Q15042 981 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms