RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 LY75O60449 1722 aa9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
THUMPD3-208ENST00000464045 HMOX1P09601 288 aa9.97□□□□□ -0.81
THUMPD3-208ENST00000464045 RALBP1Q15311 655 aa9.97□□□□□ -0.81
THUMPD3-208ENST00000464045 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-208ENST00000464045 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
THUMPD3-208ENST00000464045 ARXQ96QS3 562 aa9.96□□□□□ -0.82
THUMPD3-208ENST00000464045 MTFR1LQ9H019 292 aa9.96□□□□□ -0.82
THUMPD3-208ENST00000464045 CABP4P57796 275 aa9.95□□□□□ -0.82
THUMPD3-208ENST00000464045 DDX10Q13206 875 aaKnown RBP9.95□□□□□ -0.82
THUMPD3-208ENST00000464045 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
THUMPD3-208ENST00000464045 ITGB4P16144 1822 aa9.95□□□□□ -0.82
THUMPD3-208ENST00000464045 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 FCHSD2O94868 740 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 SIK1P57059 783 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 GPR162Q16538 588 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 MTHFSDQ2M296 383 aaKnown RBP9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 TFCP2L1Q9NZI6 479 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 ASAP1Q9ULH1 1129 aa9.94□□□□□ -0.82
THUMPD3-208ENST00000464045 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 MRC1P22897 1456 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 U2AF1L5P0DN76 240 aaPredicted RBP9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 U2AF1Q01081 240 aaKnown RBP eCLIP9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 SGIP1Q9BQI5 828 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 SLC52A2Q9HAB3 445 aa9.93□□□□□ -0.82
THUMPD3-208ENST00000464045 CHD4Q14839 1912 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 MAP3K5Q99683 1374 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 PNPLA7Q6ZV29 1317 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 RNMTO43148 476 aaKnown RBP9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 PRKAR2BP31323 418 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 NFATC2IPQ8NCF5 419 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 C5P01031 1676 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 ZNF831Q5JPB2 1677 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
THUMPD3-208ENST00000464045 MYBBP1AQ9BQG0 1328 aaKnown RBP9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 CEP350Q5VT06 3117 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 NLGN2Q8NFZ4 835 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 AK7Q96M32 723 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
THUMPD3-208ENST00000464045 SSFA2P28290 1259 aa9.9□□□□□ -0.82
THUMPD3-208ENST00000464045 POLD1P28340 1107 aa9.9□□□□□ -0.82
THUMPD3-208ENST00000464045 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
THUMPD3-208ENST00000464045 LGR6Q9HBX8 967 aa9.9□□□□□ -0.82
THUMPD3-208ENST00000464045 TUBGCP6Q96RT7 1819 aa9.9□□□□□ -0.82
THUMPD3-208ENST00000464045 C4BP0C0L5 1744 aa9.9□□□□□ -0.83
THUMPD3-208ENST00000464045 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 HTATSF1O43719 755 aaKnown RBP9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 NEFMP07197 916 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 ITPK1Q13572 414 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 WWC3Q9ULE0 1092 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 TAF1LQ8IZX4 1826 aa9.89□□□□□ -0.83
THUMPD3-208ENST00000464045 CNTNAP4Q9C0A0 1308 aa9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 TEFQ10587 303 aa9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 COL23A1Q86Y22 540 aaPredicted RBP9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
THUMPD3-208ENST00000464045 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 IL17REQ8NFR9 667 aa9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 RTF1Q92541 710 aaKnown RBP9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 PLEKHF1Q96S99 279 aa9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
THUMPD3-208ENST00000464045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 GNPATO15228 680 aa9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 C1QTNF8P60827 252 aa9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 COL24A1Q17RW2 1714 aa9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 RTCBQ9Y3I0 505 aaKnown RBP9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 KCPQ6ZWJ8 1503 aa9.86□□□□□ -0.83
THUMPD3-208ENST00000464045 RPS6KA4O75676 772 aa9.85□□□□□ -0.83
THUMPD3-208ENST00000464045 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.839e-6■□□□□ 10.4
THUMPD3-208ENST00000464045 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
THUMPD3-208ENST00000464045 UBR3Q6ZT12 1888 aa9.85□□□□□ -0.83
THUMPD3-208ENST00000464045 COL5A3P25940 1745 aaPredicted RBP9.85□□□□□ -0.83
THUMPD3-208ENST00000464045 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 GIGYF1O75420 1035 aaPredicted RBP9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 PHF14O94880 888 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 CRKLP46109 303 aaKnown RBP9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 AMIGO3Q86WK7 504 aa9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 TEX13AQ9BXU3 409 aaPredicted RBP9.84□□□□□ -0.83
THUMPD3-208ENST00000464045 BTBD11A6QL63 1104 aa9.83□□□□□ -0.84
THUMPD3-208ENST00000464045 WDR43Q15061 677 aaKnown RBP eCLIP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms