RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 ERVV-2B6SEH9 535 aa19.52■□□□□ 0.72
ABCF3-204ENST00000463685 GNAI1P63096 354 aa19.52■□□□□ 0.72
ABCF3-204ENST00000463685 DUSP27Q5VZP5 1158 aa19.52■□□□□ 0.72
ABCF3-204ENST00000463685 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
ABCF3-204ENST00000463685 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
ABCF3-204ENST00000463685 CFAP44Q96MT7 982 aa19.52■□□□□ 0.72
ABCF3-204ENST00000463685 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 CHL1O00533 1208 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 KCNQ3O43525 872 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
ABCF3-204ENST00000463685 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 MRC1P22897 1456 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 SIPA1L3O60292 1781 aaPredicted RBP19.51■□□□□ 0.71
ABCF3-204ENST00000463685 KAT6BQ8WYB5 2073 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
ABCF3-204ENST00000463685 BTBD11A6QL63 1104 aa19.5■□□□□ 0.71
ABCF3-204ENST00000463685 SYTL4Q96C24 671 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-204ENST00000463685 MYH16Q9H6N6 1097 aa19.5■□□□□ 0.71
ABCF3-204ENST00000463685 SLC39A6Q13433 755 aa19.49■□□□□ 0.71
ABCF3-204ENST00000463685 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
ABCF3-204ENST00000463685 KCNQ2O43526 872 aa19.48■□□□□ 0.71
ABCF3-204ENST00000463685 PIGBQ92521 554 aa19.48■□□□□ 0.71
ABCF3-204ENST00000463685 ITGB4P16144 1822 aa19.48■□□□□ 0.71
ABCF3-204ENST00000463685 KRT24Q2M2I5 525 aa19.47■□□□□ 0.71
ABCF3-204ENST00000463685 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
ABCF3-204ENST00000463685 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
ABCF3-204ENST00000463685 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
ABCF3-204ENST00000463685 BCL9O00512 1426 aa19.44■□□□□ 0.7
ABCF3-204ENST00000463685 C8orf58Q8NAV2 365 aa19.44■□□□□ 0.7
ABCF3-204ENST00000463685 BABAM1Q9NWV8 329 aa19.44■□□□□ 0.7
ABCF3-204ENST00000463685 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
ABCF3-204ENST00000463685 ELL2O00472 640 aaPredicted RBP19.43■□□□□ 0.7
ABCF3-204ENST00000463685 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
ABCF3-204ENST00000463685 EIF4A1P60842 406 aaKnown RBP19.42■□□□□ 0.7
ABCF3-204ENST00000463685 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
ABCF3-204ENST00000463685 FAM196AQ6ZSG2 479 aa19.42■□□□□ 0.7
ABCF3-204ENST00000463685 ATG3Q9NT62 314 aa19.42■□□□□ 0.7
ABCF3-204ENST00000463685 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-204ENST00000463685 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
ABCF3-204ENST00000463685 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
ABCF3-204ENST00000463685 NHSQ6T4R5 1651 aa19.4■□□□□ 0.7
ABCF3-204ENST00000463685 TTC5Q8N0Z6 440 aa19.4■□□□□ 0.7
ABCF3-204ENST00000463685 ZNF496Q96IT1 587 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-204ENST00000463685 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
ABCF3-204ENST00000463685 TRIM37O94972 964 aa19.39■□□□□ 0.69
ABCF3-204ENST00000463685 EP400Q96L91 3159 aa19.38■□□□□ 0.69
ABCF3-204ENST00000463685 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
ABCF3-204ENST00000463685 KCPQ6ZWJ8 1503 aa19.37■□□□□ 0.69
ABCF3-204ENST00000463685 TWISTNBQ3B726 338 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-204ENST00000463685 BTAF1O14981 1849 aa19.37■□□□□ 0.69
ABCF3-204ENST00000463685 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
ABCF3-204ENST00000463685 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
ABCF3-204ENST00000463685 BCL11BQ9C0K0 894 aaPredicted RBP19.36■□□□□ 0.69
ABCF3-204ENST00000463685 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
ABCF3-204ENST00000463685 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
ABCF3-204ENST00000463685 VAMP4O75379 141 aa19.35■□□□□ 0.69
ABCF3-204ENST00000463685 NECTIN2Q92692 538 aa19.35■□□□□ 0.69
ABCF3-204ENST00000463685 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
ABCF3-204ENST00000463685 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
ABCF3-204ENST00000463685 PALLDQ8WX93 1383 aa19.33■□□□□ 0.69
ABCF3-204ENST00000463685 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
ABCF3-204ENST00000463685 RCAN3Q9UKA8 241 aa19.33■□□□□ 0.68
ABCF3-204ENST00000463685 C5P01031 1676 aa19.33■□□□□ 0.68
ABCF3-204ENST00000463685 EIF2S2P20042 333 aaKnown RBP19.32■□□□□ 0.68
ABCF3-204ENST00000463685 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
ABCF3-204ENST00000463685 BCL2L13Q9BXK5 485 aa19.32■□□□□ 0.68
ABCF3-204ENST00000463685 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
ABCF3-204ENST00000463685 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
ABCF3-204ENST00000463685 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
ABCF3-204ENST00000463685 KCNQ4P56696 695 aa19.3■□□□□ 0.68
ABCF3-204ENST00000463685 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
ABCF3-204ENST00000463685 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
ABCF3-204ENST00000463685 USP16Q9Y5T5 823 aa19.3■□□□□ 0.68
ABCF3-204ENST00000463685 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
ABCF3-204ENST00000463685 BCAR3O75815 825 aa19.29■□□□□ 0.68
ABCF3-204ENST00000463685 SIK1P57059 783 aa19.29■□□□□ 0.68
ABCF3-204ENST00000463685 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
ABCF3-204ENST00000463685 HOXB7P09629 217 aa19.27■□□□□ 0.68
ABCF3-204ENST00000463685 ATP6V1AP38606 617 aa19.27■□□□□ 0.68
ABCF3-204ENST00000463685 ITPK1Q13572 414 aa19.27■□□□□ 0.68
ABCF3-204ENST00000463685 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.68
ABCF3-204ENST00000463685 APBA3O96018 575 aa19.26■□□□□ 0.67
ABCF3-204ENST00000463685 ANXA1P04083 346 aa19.26■□□□□ 0.67
ABCF3-204ENST00000463685 PIP4K2AP48426 406 aaPredicted RBP19.26■□□□□ 0.67
ABCF3-204ENST00000463685 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
ABCF3-204ENST00000463685 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
ABCF3-204ENST00000463685 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-204ENST00000463685 TJP1Q07157 1748 aa19.25■□□□□ 0.67
ABCF3-204ENST00000463685 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
ABCF3-204ENST00000463685 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
ABCF3-204ENST00000463685 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
ABCF3-204ENST00000463685 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
ABCF3-204ENST00000463685 TNS1Q9HBL0 1735 aaKnown RBP19.25■□□□□ 0.67
ABCF3-204ENST00000463685 A1BGP04217 495 aa19.24■□□□□ 0.67
ABCF3-204ENST00000463685 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
ABCF3-204ENST00000463685 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-204ENST00000463685 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
ABCF3-204ENST00000463685 CYP19A1P11511 503 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-204ENST00000463685 LINC00116Q8NCU8 138 aa19.23■□□□□ 0.67
ABCF3-204ENST00000463685 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms