RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 FLAD1Q8NFF5 587 aa26.23■■□□□ 1.79
TSC2-209ENST00000463601 ATP6V1AP38606 617 aa26.22■■□□□ 1.79
TSC2-209ENST00000463601 CC2D1BQ5T0F9 858 aaKnown RBP26.22■■□□□ 1.79
TSC2-209ENST00000463601 DCAF5Q96JK2 942 aa26.22■■□□□ 1.79
TSC2-209ENST00000463601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.21■■□□□ 1.79
TSC2-209ENST00000463601 ERVV-2B6SEH9 535 aa26.21■■□□□ 1.79
TSC2-209ENST00000463601 HMGB2P26583 209 aaKnown RBP26.21■■□□□ 1.79
TSC2-209ENST00000463601 MTHFSP49914 203 aa26.21■■□□□ 1.79
TSC2-209ENST00000463601 GPR162Q16538 588 aa26.21■■□□□ 1.79
TSC2-209ENST00000463601 AMOTQ4VCS5 1084 aa26.21■■□□□ 1.79
TSC2-209ENST00000463601 SLC4A9Q96Q91 983 aa26.21■■□□□ 1.79
TSC2-209ENST00000463601 KDRP35968 1356 aa26.2■■□□□ 1.79
TSC2-209ENST00000463601 HSP90AB1P08238 724 aaKnown RBP26.2■■□□□ 1.78
TSC2-209ENST00000463601 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
TSC2-209ENST00000463601 GNPATO15228 680 aa26.17■■□□□ 1.78
TSC2-209ENST00000463601 RBM42Q9BTD8 480 aaKnown RBP26.17■■□□□ 1.78
TSC2-209ENST00000463601 SSFA2P28290 1259 aa26.16■■□□□ 1.78
TSC2-209ENST00000463601 CABP4P57796 275 aa26.16■■□□□ 1.78
TSC2-209ENST00000463601 CNGB1Q14028 1251 aaPredicted RBP26.16■■□□□ 1.78
TSC2-209ENST00000463601 SCN11AQ9UI33 1791 aa26.15■■□□□ 1.78
TSC2-209ENST00000463601 COL5A3P25940 1745 aaPredicted RBP26.15■■□□□ 1.78
TSC2-209ENST00000463601 C1orf141Q5JVX7 400 aa26.15■■□□□ 1.78
TSC2-209ENST00000463601 ZNF831Q5JPB2 1677 aa26.15■■□□□ 1.78
TSC2-209ENST00000463601 HMOX1P09601 288 aa26.13■■□□□ 1.77
TSC2-209ENST00000463601 YBX3P16989 372 aaKnown RBP eCLIP26.13■■□□□ 1.77
TSC2-209ENST00000463601 ZNF784Q8NCA9 323 aaPredicted RBP26.13■■□□□ 1.77
TSC2-209ENST00000463601 NFATC2IPQ8NCF5 419 aa26.13■■□□□ 1.77
TSC2-209ENST00000463601 MYH14Q7Z406 1995 aaKnown RBP26.13■■□□□ 1.77
TSC2-209ENST00000463601 VIRMAQ69YN4 1812 aaKnown RBP26.12■■□□□ 1.77
TSC2-209ENST00000463601 NPC1L1Q9UHC9 1359 aa26.11■■□□□ 1.77
TSC2-209ENST00000463601 CD2APQ9Y5K6 639 aa26.1■■□□□ 1.77
TSC2-209ENST00000463601 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
TSC2-209ENST00000463601 DIAPH1O60610 1272 aaKnown RBP26.08■■□□□ 1.77
TSC2-209ENST00000463601 PTCD1O75127 700 aaKnown RBP26.08■■□□□ 1.77
TSC2-209ENST00000463601 COL3A1P02461 1466 aaPredicted RBP26.07■■□□□ 1.76
TSC2-209ENST00000463601 AKAP4Q5JQC9 854 aa26.07■■□□□ 1.76
TSC2-209ENST00000463601 LGR6Q9HBX8 967 aa26.07■■□□□ 1.76
TSC2-209ENST00000463601 TJP1Q07157 1748 aa26.06■■□□□ 1.76
TSC2-209ENST00000463601 RTCBQ9Y3I0 505 aaKnown RBP26.06■■□□□ 1.76
TSC2-209ENST00000463601 TRAPPC3LQ5T215 181 aa26.05■■□□□ 1.76
TSC2-209ENST00000463601 RC3H1Q5TC82 1133 aaKnown RBP26.05■■□□□ 1.76
TSC2-209ENST00000463601 CNTNAP4Q9C0A0 1308 aa26.05■■□□□ 1.76
TSC2-209ENST00000463601 MTHFSDQ2M296 383 aaKnown RBP26.04■■□□□ 1.76
TSC2-209ENST00000463601 ARHGEF1Q92888 912 aaKnown RBP26.04■■□□□ 1.76
TSC2-209ENST00000463601 C4AP0C0L4 1744 aa26.03■■□□□ 1.76
TSC2-209ENST00000463601 MMP10P09238 476 aa26.02■■□□□ 1.76
TSC2-209ENST00000463601 SLC52A2Q9HAB3 445 aa26.02■■□□□ 1.76
TSC2-209ENST00000463601 WWC3Q9ULE0 1092 aa26.02■■□□□ 1.76
TSC2-209ENST00000463601 RNMTO43148 476 aaKnown RBP26.01■■□□□ 1.75
TSC2-209ENST00000463601 RPS6KA4O75676 772 aa26.01■■□□□ 1.75
TSC2-209ENST00000463601 ADAMTS7Q9UKP4 1686 aa26■■□□□ 1.75
TSC2-209ENST00000463601 CICQ96RK0 1608 aaPredicted RBP26■■□□□ 1.75
TSC2-209ENST00000463601 MRC1P22897 1456 aa26■■□□□ 1.75
TSC2-209ENST00000463601 GRIN3BO60391 1043 aa26■■□□□ 1.75
TSC2-209ENST00000463601 CRKLP46109 303 aaKnown RBP25.99■■□□□ 1.75
TSC2-209ENST00000463601 SLC39A6Q13433 755 aa25.99■■□□□ 1.75
TSC2-209ENST00000463601 U2SURPO15042 1029 aaKnown RBP25.98■■□□□ 1.75
TSC2-209ENST00000463601 ADRA2BP18089 450 aa25.98■■□□□ 1.75
TSC2-209ENST00000463601 GYS1P13807 737 aa25.97■■□□□ 1.75
TSC2-209ENST00000463601 RFC4P35249 363 aa25.97■■□□□ 1.75
TSC2-209ENST00000463601 KIF13BQ9NQT8 1826 aa25.97■■□□□ 1.75
TSC2-209ENST00000463601 DNAJC10Q8IXB1 793 aa25.96■■□□□ 1.75
TSC2-209ENST00000463601 KIAA1551Q9HCM1 1747 aa25.96■■□□□ 1.75
TSC2-209ENST00000463601 INTS5Q6P9B9 1019 aaKnown RBP25.95■■□□□ 1.74
TSC2-209ENST00000463601 NLGN1Q8N2Q7 840 aa25.95■■□□□ 1.74
TSC2-209ENST00000463601 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
TSC2-209ENST00000463601 N4BP2Q86UW6 1770 aaPredicted RBP25.95■■□□□ 1.74
TSC2-209ENST00000463601 KCPQ6ZWJ8 1503 aa25.94■■□□□ 1.74
TSC2-209ENST00000463601 PXDNLA1KZ92 1463 aa25.91■■□□□ 1.74
TSC2-209ENST00000463601 UBR2Q8IWV8 1755 aa25.9■■□□□ 1.74
TSC2-209ENST00000463601 C10orf71Q711Q0 1435 aa25.89■■□□□ 1.74
TSC2-209ENST00000463601 FKBP8Q14318 412 aa25.89■■□□□ 1.74
TSC2-209ENST00000463601 IL17REQ8NFR9 667 aa25.89■■□□□ 1.74
TSC2-209ENST00000463601 CCDC87Q9NVE4 849 aa25.89■■□□□ 1.74
TSC2-209ENST00000463601 USP42Q9H9J4 1324 aaKnown RBP25.88■■□□□ 1.73
TSC2-209ENST00000463601 SIPA1L3O60292 1781 aaPredicted RBP25.88■■□□□ 1.73
TSC2-209ENST00000463601 CYP19A1P11511 503 aaPredicted RBP25.88■■□□□ 1.73
TSC2-209ENST00000463601 PHACTR3Q96KR7 559 aa25.88■■□□□ 1.73
TSC2-209ENST00000463601 PPP2R1AP30153 589 aa25.87■■□□□ 1.73
TSC2-209ENST00000463601 PARP3Q9Y6F1 533 aa25.87■■□□□ 1.73
TSC2-209ENST00000463601 A0A0G2JLW4 131 aa25.86■■□□□ 1.73
TSC2-209ENST00000463601 GNAT3A8MTJ3 354 aa25.86■■□□□ 1.73
TSC2-209ENST00000463601 GAS2L2Q8NHY3 880 aa25.86■■□□□ 1.73
TSC2-209ENST00000463601 SOS1Q07889 1333 aaPredicted RBP25.86■■□□□ 1.73
TSC2-209ENST00000463601 PRKAR2BP31323 418 aa25.85■■□□□ 1.73
TSC2-209ENST00000463601 DDR1Q08345 913 aa25.85■■□□□ 1.73
TSC2-209ENST00000463601 CFAP53Q96M91 514 aa25.85■■□□□ 1.73
TSC2-209ENST00000463601 RSPH6AQ9H0K4 717 aa25.85■■□□□ 1.73
TSC2-209ENST00000463601 BRCA1P38398 1863 aaKnown RBP25.84■■□□□ 1.73
TSC2-209ENST00000463601 TGFB2P61812 414 aa25.84■■□□□ 1.73
TSC2-209ENST00000463601 ATP10DQ9P241 1426 aa25.84■■□□□ 1.73
TSC2-209ENST00000463601 ZBTB1Q9Y2K1 713 aa25.84■■□□□ 1.73
TSC2-209ENST00000463601 DPEP1P16444 411 aa25.83■■□□□ 1.73
TSC2-209ENST00000463601 DDX10Q13206 875 aaKnown RBP25.83■■□□□ 1.73
TSC2-209ENST00000463601 USPL1Q5W0Q7 1092 aa25.83■■□□□ 1.73
TSC2-209ENST00000463601 C1QTNF8P60827 252 aa25.82■■□□□ 1.72
TSC2-209ENST00000463601 VSIG10Q8N0Z9 540 aa25.82■■□□□ 1.72
TSC2-209ENST00000463601 TEFQ10587 303 aa25.81■■□□□ 1.72
TSC2-209ENST00000463601 ADCY9O60503 1353 aa25.81■■□□□ 1.72
TSC2-209ENST00000463601 GIGYF1O75420 1035 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms