RNA–Protein interactions for RNA: ENST00000463574.1

HLA-B-251, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-251ENST00000463574 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
HLA-B-251ENST00000463574 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
HLA-B-251ENST00000463574 SSFA2P28290 1259 aa16.99■□□□□ 0.31
HLA-B-251ENST00000463574 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
HLA-B-251ENST00000463574 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
HLA-B-251ENST00000463574 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
HLA-B-251ENST00000463574 PHKG2P15735 406 aa16.98■□□□□ 0.31
HLA-B-251ENST00000463574 MTHFSP49914 203 aa16.98■□□□□ 0.31
HLA-B-251ENST00000463574 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
HLA-B-251ENST00000463574 ATP10DQ9P241 1426 aa16.97■□□□□ 0.31
HLA-B-251ENST00000463574 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
HLA-B-251ENST00000463574 ATP6V1AP38606 617 aa16.97■□□□□ 0.31
HLA-B-251ENST00000463574 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
HLA-B-251ENST00000463574 GNPATO15228 680 aa16.96■□□□□ 0.31
HLA-B-251ENST00000463574 ITPK1Q13572 414 aa16.96■□□□□ 0.31
HLA-B-251ENST00000463574 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
HLA-B-251ENST00000463574 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
HLA-B-251ENST00000463574 AEBP1Q8IUX7 1158 aa16.93■□□□□ 0.3
HLA-B-251ENST00000463574 ZNF526Q8TF50 670 aaPredicted RBP16.93■□□□□ 0.3
HLA-B-251ENST00000463574 IL13P35225 146 aa16.92■□□□□ 0.3
HLA-B-251ENST00000463574 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
HLA-B-251ENST00000463574 CEP350Q5VT06 3117 aa16.91■□□□□ 0.3
HLA-B-251ENST00000463574 MMP10P09238 476 aa16.91■□□□□ 0.3
HLA-B-251ENST00000463574 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
HLA-B-251ENST00000463574 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
HLA-B-251ENST00000463574 SCN11AQ9UI33 1791 aa16.91■□□□□ 0.3
HLA-B-251ENST00000463574 ERVV-2B6SEH9 535 aa16.9■□□□□ 0.3
HLA-B-251ENST00000463574 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
HLA-B-251ENST00000463574 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
HLA-B-251ENST00000463574 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
HLA-B-251ENST00000463574 RTCBQ9Y3I0 505 aaKnown RBP16.9■□□□□ 0.3
HLA-B-251ENST00000463574 ADCY9O60503 1353 aa16.89■□□□□ 0.3
HLA-B-251ENST00000463574 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
HLA-B-251ENST00000463574 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
HLA-B-251ENST00000463574 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
HLA-B-251ENST00000463574 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
HLA-B-251ENST00000463574 HMOX1P09601 288 aa16.88■□□□□ 0.29
HLA-B-251ENST00000463574 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
HLA-B-251ENST00000463574 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
HLA-B-251ENST00000463574 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
HLA-B-251ENST00000463574 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
HLA-B-251ENST00000463574 CABP4P57796 275 aa16.87■□□□□ 0.29
HLA-B-251ENST00000463574 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
HLA-B-251ENST00000463574 KDRP35968 1356 aa16.87■□□□□ 0.29
HLA-B-251ENST00000463574 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
HLA-B-251ENST00000463574 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
HLA-B-251ENST00000463574 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 KIF13BQ9NQT8 1826 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 A0A0G2JLW4 131 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
HLA-B-251ENST00000463574 ADRA2BP18089 450 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 RFC4P35249 363 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 TGFB2P61812 414 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 MYH14Q7Z406 1995 aaKnown RBP16.85■□□□□ 0.29
HLA-B-251ENST00000463574 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
HLA-B-251ENST00000463574 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
HLA-B-251ENST00000463574 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
HLA-B-251ENST00000463574 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
HLA-B-251ENST00000463574 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
HLA-B-251ENST00000463574 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
HLA-B-251ENST00000463574 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
HLA-B-251ENST00000463574 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
HLA-B-251ENST00000463574 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
HLA-B-251ENST00000463574 PTCD1O75127 700 aaKnown RBP16.83■□□□□ 0.28
HLA-B-251ENST00000463574 GYS1P13807 737 aa16.83■□□□□ 0.28
HLA-B-251ENST00000463574 HSPA6P17066 643 aa16.83■□□□□ 0.28
HLA-B-251ENST00000463574 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
HLA-B-251ENST00000463574 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
HLA-B-251ENST00000463574 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
HLA-B-251ENST00000463574 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
HLA-B-251ENST00000463574 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
HLA-B-251ENST00000463574 KIF3CO14782 793 aa16.81■□□□□ 0.28
HLA-B-251ENST00000463574 DPEP1P16444 411 aa16.81■□□□□ 0.28
HLA-B-251ENST00000463574 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
HLA-B-251ENST00000463574 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
HLA-B-251ENST00000463574 C10orf71Q711Q0 1435 aa16.8■□□□□ 0.28
HLA-B-251ENST00000463574 FCHSD2O94868 740 aa16.79■□□□□ 0.28
HLA-B-251ENST00000463574 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
HLA-B-251ENST00000463574 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
HLA-B-251ENST00000463574 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
HLA-B-251ENST00000463574 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
HLA-B-251ENST00000463574 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
HLA-B-251ENST00000463574 BRCA1P38398 1863 aaKnown RBP16.77■□□□□ 0.27
HLA-B-251ENST00000463574 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.27
HLA-B-251ENST00000463574 KCNA3P22001 575 aa16.76■□□□□ 0.27
HLA-B-251ENST00000463574 MTHFSDQ2M296 383 aaKnown RBP16.76■□□□□ 0.27
HLA-B-251ENST00000463574 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
HLA-B-251ENST00000463574 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
HLA-B-251ENST00000463574 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-B-251ENST00000463574 FKBP8Q14318 412 aa16.75■□□□□ 0.27
HLA-B-251ENST00000463574 RALBP1Q15311 655 aa16.75■□□□□ 0.27
HLA-B-251ENST00000463574 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
HLA-B-251ENST00000463574 PIM2Q9P1W9 311 aa16.75■□□□□ 0.27
HLA-B-251ENST00000463574 TJP1Q07157 1748 aa16.74■□□□□ 0.27
HLA-B-251ENST00000463574 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
HLA-B-251ENST00000463574 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
HLA-B-251ENST00000463574 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
HLA-B-251ENST00000463574 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
HLA-B-251ENST00000463574 TOMM70O94826 608 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms